RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 DAGLBQ8NCG7 672 aa21.25■□□□□ 0.99
CCDC78-204ENST00000439619 MRPL38Q96DV4 380 aaKnown RBP21.25■□□□□ 0.99
CCDC78-204ENST00000439619 ADGRA3Q8IWK6 1321 aa21.25■□□□□ 0.99
CCDC78-204ENST00000439619 TRANK1O15050 2925 aa21.24■□□□□ 0.99
CCDC78-204ENST00000439619 GPR182O15218 404 aa21.24■□□□□ 0.99
CCDC78-204ENST00000439619 MSH4O15457 936 aa21.24■□□□□ 0.99
CCDC78-204ENST00000439619 RPS6KA5O75582 802 aa21.24■□□□□ 0.99
CCDC78-204ENST00000439619 RB1P06400 928 aa21.24■□□□□ 0.99
CCDC78-204ENST00000439619 CTNNB1P35222 781 aa21.24■□□□□ 0.99
CCDC78-204ENST00000439619 NFX1Q12986 1120 aaKnown RBP21.24■□□□□ 0.99
CCDC78-204ENST00000439619 NONOQ15233 471 aaKnown RBP eCLIP21.24■□□□□ 0.99
CCDC78-204ENST00000439619 Q4G0T1 1027 aa21.24■□□□□ 0.99
CCDC78-204ENST00000439619 KRT25Q7Z3Z0 450 aa21.24■□□□□ 0.99
CCDC78-204ENST00000439619 NPAS4Q8IUM7 802 aa21.24■□□□□ 0.99
CCDC78-204ENST00000439619 KIAA0319LQ8IZA0 1049 aa21.24■□□□□ 0.99
CCDC78-204ENST00000439619 LENG9Q96B70 501 aa21.24■□□□□ 0.99
CCDC78-204ENST00000439619 MAP7D2Q96T17 732 aa21.24■□□□□ 0.99
CCDC78-204ENST00000439619 C11orf84Q9BUA3 381 aaPredicted RBP21.24■□□□□ 0.99
CCDC78-204ENST00000439619 LRFN2Q9ULH4 789 aa21.24■□□□□ 0.99
CCDC78-204ENST00000439619 PTPRSQ13332 1948 aa21.23■□□□□ 0.99
CCDC78-204ENST00000439619 CHMP2AO43633 222 aa21.23■□□□□ 0.99
CCDC78-204ENST00000439619 CENPBP07199 599 aaPredicted RBP21.23■□□□□ 0.99
CCDC78-204ENST00000439619 MOXD1Q6UVY6 613 aa21.23■□□□□ 0.99
CCDC78-204ENST00000439619 RDM1Q8NG50 284 aa21.23■□□□□ 0.99
CCDC78-204ENST00000439619 WASF1Q92558 559 aa21.23■□□□□ 0.99
CCDC78-204ENST00000439619 SLC5A5Q92911 643 aa21.23■□□□□ 0.99
CCDC78-204ENST00000439619 COL4A6Q14031 1691 aa21.23■□□□□ 0.99
CCDC78-204ENST00000439619 CCDC194A0A1B0GVG4 234 aa21.22■□□□□ 0.99
CCDC78-204ENST00000439619 DENND3A2RUS2 1198 aa21.22■□□□□ 0.99
CCDC78-204ENST00000439619 DGKIO75912 1065 aa21.22■□□□□ 0.99
CCDC78-204ENST00000439619 C22orf31O95567 290 aa21.22■□□□□ 0.99
CCDC78-204ENST00000439619 OATP04181 439 aa21.22■□□□□ 0.99
CCDC78-204ENST00000439619 ATP4AP20648 1035 aa21.22■□□□□ 0.99
CCDC78-204ENST00000439619 CRYBB1P53674 252 aaPredicted RBP21.22■□□□□ 0.99
CCDC78-204ENST00000439619 MICAL3Q7RTP6 2002 aa21.22■□□□□ 0.99
CCDC78-204ENST00000439619 KAT6AQ92794 2004 aa21.22■□□□□ 0.99
CCDC78-204ENST00000439619 STK36Q9NRP7 1315 aa21.22■□□□□ 0.99
CCDC78-204ENST00000439619 CYP3A7-CYP3A51PA0A087WV96 503 aa21.21■□□□□ 0.99
CCDC78-204ENST00000439619 RBAK-RBAKDNI3L0D1 243 aa21.21■□□□□ 0.99
CCDC78-204ENST00000439619 PFKFB2O60825 505 aa21.21■□□□□ 0.99
CCDC78-204ENST00000439619 BMP1P13497 986 aa21.21■□□□□ 0.99
CCDC78-204ENST00000439619 CYP3A7P24462 503 aa21.21■□□□□ 0.99
CCDC78-204ENST00000439619 BMPR1AP36894 532 aa21.21■□□□□ 0.99
CCDC78-204ENST00000439619 SCRN1Q12765 414 aa21.21■□□□□ 0.99
CCDC78-204ENST00000439619 MIER3Q7Z3K6 550 aa21.21■□□□□ 0.99
CCDC78-204ENST00000439619 NAP1L4Q99733 375 aaKnown RBP21.21■□□□□ 0.99
CCDC78-204ENST00000439619 LMAN2LQ9H0V9 348 aa21.21■□□□□ 0.99
CCDC78-204ENST00000439619 C1orf112Q9NSG2 853 aa21.21■□□□□ 0.99
CCDC78-204ENST00000439619 AKT3Q9Y243 479 aa21.21■□□□□ 0.99
CCDC78-204ENST00000439619 MYO9BQ13459 2157 aa21.2■□□□□ 0.98
CCDC78-204ENST00000439619 ZBTB42B2RXF5 422 aa21.2■□□□□ 0.98
CCDC78-204ENST00000439619 C5orf67F2Z3F1 127 aa21.2■□□□□ 0.98
CCDC78-204ENST00000439619 KCNQ1P51787 676 aa21.2■□□□□ 0.98
CCDC78-204ENST00000439619 PRKCEQ02156 737 aa21.2■□□□□ 0.98
CCDC78-204ENST00000439619 KIZQ2M2Z5 673 aa21.2■□□□□ 0.98
CCDC78-204ENST00000439619 TMEM266Q2M3C6 531 aa21.2■□□□□ 0.98
CCDC78-204ENST00000439619 CMTR2Q8IYT2 770 aaKnown RBP21.2■□□□□ 0.98
CCDC78-204ENST00000439619 BANK1Q8NDB2 785 aa21.2■□□□□ 0.98
CCDC78-204ENST00000439619 ZNF689Q96CS4 500 aaPredicted RBP21.2■□□□□ 0.98
CCDC78-204ENST00000439619 PLVAPQ9BX97 442 aa21.2■□□□□ 0.98
CCDC78-204ENST00000439619 UNC45AQ9H3U1 944 aa21.2■□□□□ 0.98
CCDC78-204ENST00000439619 DDX25Q9UHL0 483 aaKnown RBP21.2■□□□□ 0.98
CCDC78-204ENST00000439619 TPCN1Q9ULQ1 816 aa21.2■□□□□ 0.98
CCDC78-204ENST00000439619 PCDHB7Q9Y5E2 793 aa21.2■□□□□ 0.98
CCDC78-204ENST00000439619 COL4A4P53420 1690 aaPredicted RBP21.19■□□□□ 0.98
CCDC78-204ENST00000439619 M0R2N6 131 aa21.19■□□□□ 0.98
CCDC78-204ENST00000439619 PSMD10O75832 226 aa21.19■□□□□ 0.98
CCDC78-204ENST00000439619 TDP2O95551 362 aa21.19■□□□□ 0.98
CCDC78-204ENST00000439619 SARSP49591 514 aaKnown RBP21.19■□□□□ 0.98
CCDC78-204ENST00000439619 TBC1D8BQ0IIM8 1120 aa21.19■□□□□ 0.98
CCDC78-204ENST00000439619 EFCAB12Q6NXP0 572 aa21.19■□□□□ 0.98
CCDC78-204ENST00000439619 RTN4RL1Q86UN2 441 aaPredicted RBP21.19■□□□□ 0.98
CCDC78-204ENST00000439619 LINC01599Q8WXQ3 324 aa21.19■□□□□ 0.98
CCDC78-204ENST00000439619 CLP1Q92989 425 aaKnown RBP21.19■□□□□ 0.98
CCDC78-204ENST00000439619 AIFM3Q96NN9 605 aa21.19■□□□□ 0.98
CCDC78-204ENST00000439619 PHF20Q9BVI0 1012 aa21.19■□□□□ 0.98
CCDC78-204ENST00000439619 NSUN3Q9H649 340 aaKnown RBP21.19■□□□□ 0.98
CCDC78-204ENST00000439619 BRMS1Q9HCU9 246 aa21.19■□□□□ 0.98
CCDC78-204ENST00000439619 ERVK-5Q9HDB9 667 aa21.19■□□□□ 0.98
CCDC78-204ENST00000439619 ST3GAL5Q9UNP4 418 aa21.19■□□□□ 0.98
CCDC78-204ENST00000439619 KCNJ14Q9UNX9 436 aa21.19■□□□□ 0.98
CCDC78-204ENST00000439619 NOC2LQ9Y3T9 749 aaKnown RBP21.19■□□□□ 0.98
CCDC78-204ENST00000439619 MARCH6O60337 910 aa21.18■□□□□ 0.98
CCDC78-204ENST00000439619 VTNP04004 478 aa21.18■□□□□ 0.98
CCDC78-204ENST00000439619 GCFC2P16383 781 aaKnown RBP21.18■□□□□ 0.98
CCDC78-204ENST00000439619 IBSPP21815 317 aaPredicted RBP21.18■□□□□ 0.98
CCDC78-204ENST00000439619 CDC42EP1Q00587 391 aa21.18■□□□□ 0.98
CCDC78-204ENST00000439619 INF2Q27J81 1249 aa21.18■□□□□ 0.98
CCDC78-204ENST00000439619 LETM2Q2VYF4 491 aa21.18■□□□□ 0.98
CCDC78-204ENST00000439619 SLC24A5Q71RS6 500 aa21.18■□□□□ 0.98
CCDC78-204ENST00000439619 SCLT1Q96NL6 688 aa21.18■□□□□ 0.98
CCDC78-204ENST00000439619 OSMRQ99650 979 aa21.18■□□□□ 0.98
CCDC78-204ENST00000439619 ADAM2Q99965 735 aa21.18■□□□□ 0.98
CCDC78-204ENST00000439619 UBE2ZQ9H832 354 aaPredicted RBP21.18■□□□□ 0.98
CCDC78-204ENST00000439619 RC3H2Q9HBD1 1191 aaKnown RBP21.18■□□□□ 0.98
CCDC78-204ENST00000439619 ORC3Q9UBD5 711 aaPredicted RBP21.18■□□□□ 0.98
CCDC78-204ENST00000439619 VCANP13611 3396 aa21.17■□□□□ 0.98
CCDC78-204ENST00000439619 NCK2O43639 380 aa21.17■□□□□ 0.98
CCDC78-204ENST00000439619 DKC1O60832 514 aaKnown RBP eCLIP21.17■□□□□ 0.98
CCDC78-204ENST00000439619 DNM2P50570 870 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms