RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 EHHADHQ08426 723 aa17.12■□□□□ 0.33
DHFR-201ENST00000439211 SFMBT2Q5VUG0 894 aa17.12■□□□□ 0.33
DHFR-201ENST00000439211 WDR59Q6PJI9 974 aa17.12■□□□□ 0.33
DHFR-201ENST00000439211 VSIG1Q86XK7 387 aa17.12■□□□□ 0.33
DHFR-201ENST00000439211 CNBD1Q8NA66 436 aa17.12■□□□□ 0.33
DHFR-201ENST00000439211 CEP95Q96GE4 821 aa17.12■□□□□ 0.33
DHFR-201ENST00000439211 LRRC27Q9C0I9 530 aa17.12■□□□□ 0.33
DHFR-201ENST00000439211 MAD2L2Q9UI95 211 aa17.12■□□□□ 0.33
DHFR-201ENST00000439211 A0A1B0GVG6 124 aa17.12■□□□□ 0.33
DHFR-201ENST00000439211 ZNF76P36508 570 aa17.12■□□□□ 0.33
DHFR-201ENST00000439211 ALDH5A1P51649 535 aaPredicted RBP17.12■□□□□ 0.33
DHFR-201ENST00000439211 KLHL30Q0D2K2 578 aa17.12■□□□□ 0.33
DHFR-201ENST00000439211 C6orf89Q6UWU4 347 aa17.12■□□□□ 0.33
DHFR-201ENST00000439211 CLEC10AQ8IUN9 316 aa17.12■□□□□ 0.33
DHFR-201ENST00000439211 GALNT15Q8N3T1 639 aa17.12■□□□□ 0.33
DHFR-201ENST00000439211 NWD2Q9ULI1 1742 aa17.12■□□□□ 0.33
DHFR-201ENST00000439211 CYTH3O43739 400 aa17.12■□□□□ 0.33
DHFR-201ENST00000439211 FLOT1O75955 427 aa17.12■□□□□ 0.33
DHFR-201ENST00000439211 KCNJ2P63252 427 aa17.12■□□□□ 0.33
DHFR-201ENST00000439211 TRMT1LQ7Z2T5 733 aaKnown RBP17.12■□□□□ 0.33
DHFR-201ENST00000439211 KBTBD4Q9NVX7 518 aa17.12■□□□□ 0.33
DHFR-201ENST00000439211 PCDHA12Q9UN75 941 aa17.12■□□□□ 0.33
DHFR-201ENST00000439211 DEUP1Q05D60 604 aa17.11■□□□□ 0.33
DHFR-201ENST00000439211 ITGB3BPQ13352 177 aaPredicted RBP17.11■□□□□ 0.33
DHFR-201ENST00000439211 KIAA0753Q2KHM9 967 aa17.11■□□□□ 0.33
DHFR-201ENST00000439211 DDX12PQ92771 950 aa17.11■□□□□ 0.33
DHFR-201ENST00000439211 CAPN6Q9Y6Q1 641 aa17.11■□□□□ 0.33
DHFR-201ENST00000439211 TRPM3Q9HCF6 1732 aaPredicted RBP17.11■□□□□ 0.33
DHFR-201ENST00000439211 GHRP10912 638 aa17.11■□□□□ 0.33
DHFR-201ENST00000439211 RFC5P40937 340 aa17.11■□□□□ 0.33
DHFR-201ENST00000439211 HAUS3Q68CZ6 603 aa17.11■□□□□ 0.33
DHFR-201ENST00000439211 PIDD1Q9HB75 910 aa17.11■□□□□ 0.33
DHFR-201ENST00000439211 BIRC3Q13489 604 aa17.11■□□□□ 0.33
DHFR-201ENST00000439211 FAM26FQ5R3K3 315 aa17.11■□□□□ 0.33
DHFR-201ENST00000439211 CAVIN3Q969G5 261 aa17.11■□□□□ 0.33
DHFR-201ENST00000439211 DUSP9Q99956 384 aaKnown RBP17.11■□□□□ 0.33
DHFR-201ENST00000439211 ZNF189O75820 626 aaPredicted RBP17.1■□□□□ 0.33
DHFR-201ENST00000439211 GLI1P08151 1106 aa17.1■□□□□ 0.33
DHFR-201ENST00000439211 SBK1Q52WX2 424 aa17.1■□□□□ 0.33
DHFR-201ENST00000439211 SLF2Q8IX21 1173 aa17.1■□□□□ 0.33
DHFR-201ENST00000439211 MAGEF1Q9HAY2 307 aa17.1■□□□□ 0.33
DHFR-201ENST00000439211 SPDYE5A6NIY4 337 aa17.1■□□□□ 0.33
DHFR-201ENST00000439211 COQ9O75208 318 aa17.1■□□□□ 0.33
DHFR-201ENST00000439211 MAGEA8P43361 318 aa17.1■□□□□ 0.33
DHFR-201ENST00000439211 SERPINB4P48594 390 aa17.1■□□□□ 0.33
DHFR-201ENST00000439211 MTA1Q13330 715 aa17.1■□□□□ 0.33
DHFR-201ENST00000439211 DPP8Q6V1X1 898 aaPredicted RBP17.1■□□□□ 0.33
DHFR-201ENST00000439211 CCDC65Q8IXS2 484 aa17.1■□□□□ 0.33
DHFR-201ENST00000439211 UHMK1Q8TAS1 419 aaKnown RBP17.1■□□□□ 0.33
DHFR-201ENST00000439211 TBC1D5Q92609 795 aa17.1■□□□□ 0.33
DHFR-201ENST00000439211 ADAMTS1Q9UHI8 967 aa17.1■□□□□ 0.33
DHFR-201ENST00000439211 PACSIN2Q9UNF0 486 aaPredicted RBP17.1■□□□□ 0.33
DHFR-201ENST00000439211 ADAMTSL3P82987 1691 aa17.1■□□□□ 0.33
DHFR-201ENST00000439211 CCDC160A6NGH7 325 aa17.1■□□□□ 0.33
DHFR-201ENST00000439211 MYMKA6NI61 221 aa17.1■□□□□ 0.33
DHFR-201ENST00000439211 CDC37Q16543 378 aaPredicted RBP17.1■□□□□ 0.33
DHFR-201ENST00000439211 LINC00116Q8NCU8 138 aa17.1■□□□□ 0.33
DHFR-201ENST00000439211 SLC17A8Q8NDX2 589 aa17.1■□□□□ 0.33
DHFR-201ENST00000439211 KIAA1024Q9UPX6 916 aa17.1■□□□□ 0.33
DHFR-201ENST00000439211 HNRNPCP07910 306 aaKnown RBP eCLIP17.09■□□□□ 0.33
DHFR-201ENST00000439211 PLCG2P16885 1265 aa17.09■□□□□ 0.33
DHFR-201ENST00000439211 RPS6KC1Q96S38 1066 aa17.09■□□□□ 0.33
DHFR-201ENST00000439211 PAGR1Q9BTK6 254 aa17.09■□□□□ 0.33
DHFR-201ENST00000439211 IQCGQ9H095 443 aaKnown RBP17.09■□□□□ 0.33
DHFR-201ENST00000439211 GTF2IP78347 998 aa17.09■□□□□ 0.33
DHFR-201ENST00000439211 NFIXQ14938 502 aa17.09■□□□□ 0.33
DHFR-201ENST00000439211 INTS8Q75QN2 995 aaKnown RBP17.09■□□□□ 0.33
DHFR-201ENST00000439211 IQCKQ8N0W5 287 aa17.09■□□□□ 0.33
DHFR-201ENST00000439211 CCT6BQ92526 530 aa17.09■□□□□ 0.33
DHFR-201ENST00000439211 DDX25Q9UHL0 483 aaKnown RBP17.09■□□□□ 0.33
DHFR-201ENST00000439211 ZNF232Q9UNY5 417 aa17.09■□□□□ 0.33
DHFR-201ENST00000439211 ZNF142P52746 1687 aaPredicted RBP17.09■□□□□ 0.33
DHFR-201ENST00000439211 MYH2Q9UKX2 1941 aa17.09■□□□□ 0.33
DHFR-201ENST00000439211 IMPDH2P12268 514 aa17.09■□□□□ 0.33
DHFR-201ENST00000439211 MTMR3Q13615 1198 aa17.09■□□□□ 0.33
DHFR-201ENST00000439211 PPFIBP2Q8ND30 876 aa17.09■□□□□ 0.33
DHFR-201ENST00000439211 OPTNQ96CV9 577 aa17.09■□□□□ 0.33
DHFR-201ENST00000439211 XPO6Q96QU8 1125 aaKnown RBP17.09■□□□□ 0.33
DHFR-201ENST00000439211 TMBIM4Q9HC24 238 aa17.09■□□□□ 0.33
DHFR-201ENST00000439211 CEP104O60308 925 aa17.08■□□□□ 0.33
DHFR-201ENST00000439211 SUN1O94901 812 aa17.08■□□□□ 0.33
DHFR-201ENST00000439211 UBOX5O94941 541 aa17.08■□□□□ 0.33
DHFR-201ENST00000439211 OATP04181 439 aa17.08■□□□□ 0.33
DHFR-201ENST00000439211 RASA1P20936 1047 aa17.08■□□□□ 0.33
DHFR-201ENST00000439211 SLC1A4P43007 532 aa17.08■□□□□ 0.33
DHFR-201ENST00000439211 ZC3H18Q86VM9 953 aaKnown RBP17.08■□□□□ 0.33
DHFR-201ENST00000439211 RAB3IPQ96QF0 476 aaPredicted RBP17.08■□□□□ 0.33
DHFR-201ENST00000439211 LBHD1Q9BQE6 289 aaPredicted RBP17.08■□□□□ 0.33
DHFR-201ENST00000439211 GALNT8Q9NY28 637 aa17.08■□□□□ 0.33
DHFR-201ENST00000439211 SLC5A4Q9NY91 659 aa17.08■□□□□ 0.33
DHFR-201ENST00000439211 INTUQ9ULD6 942 aa17.08■□□□□ 0.33
DHFR-201ENST00000439211 KLRC4O43908 158 aa17.08■□□□□ 0.32
DHFR-201ENST00000439211 RNF220Q5VTB9 566 aa17.08■□□□□ 0.32
DHFR-201ENST00000439211 NUGGCQ68CJ6 796 aa17.08■□□□□ 0.32
DHFR-201ENST00000439211 GPBP1Q86WP2 473 aa17.08■□□□□ 0.32
DHFR-201ENST00000439211 FAM133AQ8N9E0 248 aa17.08■□□□□ 0.32
DHFR-201ENST00000439211 KCNK3O14649 394 aa17.08■□□□□ 0.32
DHFR-201ENST00000439211 MSH2P43246 934 aa17.08■□□□□ 0.32
DHFR-201ENST00000439211 FKBP3Q00688 224 aaKnown RBP17.08■□□□□ 0.32
DHFR-201ENST00000439211 FAM47EQ6ZV65 393 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms