RNA–Protein interactions for RNA: ENST00000439009.1

LINC00578-201, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-201ENST00000439009 ODR4Q5SWX8 454 aa9.03□□□□□ -0.96
LINC00578-201ENST00000439009 FAM102BQ5T8I3 360 aa9.03□□□□□ -0.96
LINC00578-201ENST00000439009 RALYLQ86SE5 291 aaKnown RBP9.03□□□□□ -0.96
LINC00578-201ENST00000439009 TMTC2Q8N394 836 aa9.03□□□□□ -0.96
LINC00578-201ENST00000439009 COLGALT1Q8NBJ5 622 aa9.03□□□□□ -0.96
LINC00578-201ENST00000439009 CTCFLQ8NI51 663 aaPredicted RBP9.03□□□□□ -0.96
LINC00578-201ENST00000439009 MICAL1Q8TDZ2 1067 aa9.03□□□□□ -0.96
LINC00578-201ENST00000439009 RIPOR3Q96MK2 946 aa9.03□□□□□ -0.96
LINC00578-201ENST00000439009 MXRA8Q9BRK3 442 aa9.03□□□□□ -0.96
LINC00578-201ENST00000439009 CWH43Q9H720 699 aa9.03□□□□□ -0.96
LINC00578-201ENST00000439009 CDHR5Q9HBB8 845 aa9.03□□□□□ -0.96
LINC00578-201ENST00000439009 NGRNQ9NPE2 291 aaKnown RBP9.03□□□□□ -0.96
LINC00578-201ENST00000439009 TYW1Q9NV66 732 aaKnown RBP9.03□□□□□ -0.96
LINC00578-201ENST00000439009 TMEM260Q9NX78 707 aa9.03□□□□□ -0.96
LINC00578-201ENST00000439009 SEC63Q9UGP8 760 aaKnown RBP9.03□□□□□ -0.96
LINC00578-201ENST00000439009 LRFN2Q9ULH4 789 aa9.03□□□□□ -0.96
LINC00578-201ENST00000439009 PCDHA6Q9UN73 950 aa9.03□□□□□ -0.96
LINC00578-201ENST00000439009 NOC2LQ9Y3T9 749 aaKnown RBP9.03□□□□□ -0.96
LINC00578-201ENST00000439009 PCDHA8Q9Y5H6 950 aa9.03□□□□□ -0.96
LINC00578-201ENST00000439009 BAZ2BQ9UIF8 2168 aaKnown RBP9.03□□□□□ -0.96
LINC00578-201ENST00000439009 GVINP1Q7Z2Y8 2422 aa9.02□□□□□ -0.97
LINC00578-201ENST00000439009 MYH6P13533 1939 aa9.02□□□□□ -0.97
LINC00578-201ENST00000439009 TBKBP1A7MCY6 615 aa9.02□□□□□ -0.97
LINC00578-201ENST00000439009 MEIS1O00470 390 aa9.02□□□□□ -0.97
LINC00578-201ENST00000439009 GPR182O15218 404 aa9.02□□□□□ -0.97
LINC00578-201ENST00000439009 HBP1O60381 514 aa9.02□□□□□ -0.97
LINC00578-201ENST00000439009 RPS6KA5O75582 802 aa9.02□□□□□ -0.97
LINC00578-201ENST00000439009 PLEKHA8P1O95397 391 aa9.02□□□□□ -0.97
LINC00578-201ENST00000439009 SRGAP2BP0DMP2 458 aa9.02□□□□□ -0.97
LINC00578-201ENST00000439009 LAG3P18627 525 aa9.02□□□□□ -0.97
LINC00578-201ENST00000439009 CHMLP26374 656 aa9.02□□□□□ -0.97
LINC00578-201ENST00000439009 KLRC1P26715 233 aa9.02□□□□□ -0.97
LINC00578-201ENST00000439009 NBL1P41271 181 aa9.02□□□□□ -0.97
LINC00578-201ENST00000439009 LIFRP42702 1097 aa9.02□□□□□ -0.97
LINC00578-201ENST00000439009 ITGB3BPQ13352 177 aaPredicted RBP9.02□□□□□ -0.97
LINC00578-201ENST00000439009 TMEM266Q2M3C6 531 aa9.02□□□□□ -0.97
LINC00578-201ENST00000439009 ABHD15Q6UXT9 468 aa9.02□□□□□ -0.97
LINC00578-201ENST00000439009 UBALD2Q8IYN6 164 aa9.02□□□□□ -0.97
LINC00578-201ENST00000439009 CYP2W1Q8TAV3 490 aa9.02□□□□□ -0.97
LINC00578-201ENST00000439009 TRAPPC12Q8WVT3 735 aa9.02□□□□□ -0.97
LINC00578-201ENST00000439009 TMEM40Q8WWA1 233 aa9.02□□□□□ -0.97
LINC00578-201ENST00000439009 RUFY2Q8WXA3 655 aa9.02□□□□□ -0.97
LINC00578-201ENST00000439009 MRPS27Q92552 414 aaKnown RBP9.02□□□□□ -0.97
LINC00578-201ENST00000439009 ATOH1Q92858 354 aaPredicted RBP9.02□□□□□ -0.97
LINC00578-201ENST00000439009 MAP4K1Q92918 833 aa9.02□□□□□ -0.97
LINC00578-201ENST00000439009 ADAM2Q99965 735 aa9.02□□□□□ -0.97
LINC00578-201ENST00000439009 FAM86C1Q9NVL1 165 aa9.02□□□□□ -0.97
LINC00578-201ENST00000439009 TMEM161AQ9NX61 479 aa9.02□□□□□ -0.97
LINC00578-201ENST00000439009 PUF60Q9UHX1 559 aaKnown RBP9.02□□□□□ -0.97
LINC00578-201ENST00000439009 ST3GAL5Q9UNP4 418 aa9.02□□□□□ -0.97
LINC00578-201ENST00000439009 TRPC6Q9Y210 931 aa9.02□□□□□ -0.97
LINC00578-201ENST00000439009 CACNA1AO00555 2505 aa9.02□□□□□ -0.97
LINC00578-201ENST00000439009 ZNF292O60281 2723 aa9.02□□□□□ -0.97
LINC00578-201ENST00000439009 COL1A2P08123 1366 aa9.01□□□□□ -0.97
LINC00578-201ENST00000439009 DENND3A2RUS2 1198 aa9.01□□□□□ -0.97
LINC00578-201ENST00000439009 SPDYE3A6NKU9 549 aa9.01□□□□□ -0.97
LINC00578-201ENST00000439009 ZBTB42B2RXF5 422 aa9.01□□□□□ -0.97
LINC00578-201ENST00000439009 H0Y858 1186 aa9.01□□□□□ -0.97
LINC00578-201ENST00000439009 SGSM2O43147 1006 aa9.01□□□□□ -0.97
LINC00578-201ENST00000439009 GPR32O75388 356 aa9.01□□□□□ -0.97
LINC00578-201ENST00000439009 ARP10275 920 aa9.01□□□□□ -0.97
LINC00578-201ENST00000439009 GSPT1P15170 499 aaKnown RBP9.01□□□□□ -0.97
LINC00578-201ENST00000439009 TECP42680 631 aa9.01□□□□□ -0.97
LINC00578-201ENST00000439009 CRYBB1P53674 252 aaPredicted RBP9.01□□□□□ -0.97
LINC00578-201ENST00000439009 ITIH3Q06033 890 aa9.01□□□□□ -0.97
LINC00578-201ENST00000439009 NFX1Q12986 1120 aaKnown RBP9.01□□□□□ -0.97
LINC00578-201ENST00000439009 UBE2SQ16763 222 aa9.01□□□□□ -0.97
LINC00578-201ENST00000439009 CEP55Q53EZ4 464 aa9.01□□□□□ -0.97
LINC00578-201ENST00000439009 ZNF484Q5JVG2 852 aa9.01□□□□□ -0.97
LINC00578-201ENST00000439009 LRRC55Q6ZSA7 311 aa9.01□□□□□ -0.97
LINC00578-201ENST00000439009 NIPA1Q7RTP0 329 aa9.01□□□□□ -0.97
LINC00578-201ENST00000439009 THNSL1Q8IYQ7 743 aa9.01□□□□□ -0.97
LINC00578-201ENST00000439009 KREMEN2Q8NCW0 462 aa9.01□□□□□ -0.97
LINC00578-201ENST00000439009 NECTIN4Q96NY8 510 aa9.01□□□□□ -0.97
LINC00578-201ENST00000439009 CASD1Q96PB1 797 aa9.01□□□□□ -0.97
LINC00578-201ENST00000439009 SDF4Q9BRK5 362 aa9.01□□□□□ -0.97
LINC00578-201ENST00000439009 MYL10Q9BUA6 226 aa9.01□□□□□ -0.97
LINC00578-201ENST00000439009 TMEM117Q9H0C3 514 aa9.01□□□□□ -0.97
LINC00578-201ENST00000439009 ADAM7Q9H2U9 754 aa9.01□□□□□ -0.97
LINC00578-201ENST00000439009 ATP6V0A4Q9HBG4 840 aa9.01□□□□□ -0.97
LINC00578-201ENST00000439009 AGO4Q9HCK5 861 aaKnown RBP9.01□□□□□ -0.97
LINC00578-201ENST00000439009 RNF19AQ9NV58 838 aa9.01□□□□□ -0.97
LINC00578-201ENST00000439009 PKD2L1Q9P0L9 805 aa9.01□□□□□ -0.97
LINC00578-201ENST00000439009 SORCS3Q9UPU3 1222 aa9.01□□□□□ -0.97
LINC00578-201ENST00000439009 NR2E1Q9Y466 385 aa9.01□□□□□ -0.97
LINC00578-201ENST00000439009 FAM186AA6NE01 2351 aa9□□□□□ -0.97
LINC00578-201ENST00000439009 HIDE1A8MVS5 230 aa9□□□□□ -0.97
LINC00578-201ENST00000439009 SH2B2O14492 632 aaPredicted RBP9□□□□□ -0.97
LINC00578-201ENST00000439009 DHX15O43143 795 aaKnown RBP9□□□□□ -0.97
LINC00578-201ENST00000439009 HOXA2O43364 376 aa9□□□□□ -0.97
LINC00578-201ENST00000439009 CCNE2O96020 404 aa9□□□□□ -0.97
LINC00578-201ENST00000439009 FOSP01100 380 aaPredicted RBP9□□□□□ -0.97
LINC00578-201ENST00000439009 PDGFBP01127 241 aaPredicted RBP9□□□□□ -0.97
LINC00578-201ENST00000439009 CALM1P0DP23 149 aa9□□□□□ -0.97
LINC00578-201ENST00000439009 CALM2P0DP24 149 aa9□□□□□ -0.97
LINC00578-201ENST00000439009 CALM3P0DP25 149 aa9□□□□□ -0.97
LINC00578-201ENST00000439009 FGFR1P11362 822 aa9□□□□□ -0.97
LINC00578-201ENST00000439009 ATP4AP20648 1035 aa9□□□□□ -0.97
LINC00578-201ENST00000439009 PDE4AP27815 886 aa9□□□□□ -0.97
LINC00578-201ENST00000439009 PPM1AP35813 382 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms