RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 APAF1O14727 1248 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 SNX2O60749 519 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 FZD7O75084 574 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 RFPL1O75677 317 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 IGHDP01880 384 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 HSP90AB1P08238 724 aaKnown RBP4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 ITGA4P13612 1032 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 TNFAIP3P21580 790 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 ATICP31939 592 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 MMP14P50281 582 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 CASP7P55210 303 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 ZNF280AP59817 542 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 TAF11Q15544 211 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 FAM133BQ5BKY9 247 aaKnown RBP4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 DACT2Q5SW24 774 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 JAKMIP3Q5VZ66 844 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 TSHZ3Q63HK5 1081 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 MZT2AQ6P582 158 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 STRA8Q7Z7C7 330 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 STK32CQ86UX6 486 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 REXO1Q8N1G1 1221 aaKnown RBP4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 CHCHD4Q8N4Q1 142 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 OTUD6BQ8N6M0 293 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 FRS2Q8WU20 508 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 NELL1Q92832 810 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 CHMP4CQ96CF2 233 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 MTMR8Q96EF0 704 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 SCLT1Q96NL6 688 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 NELL2Q99435 816 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 YIPF4Q9BSR8 244 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 CCDC8Q9H0W5 538 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 CSRNP2Q9H175 543 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 KMT5AQ9NQR1 393 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 GULP1Q9UBP9 304 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 PGAP2Q9UHJ9 254 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 FHOD1Q9Y613 1164 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 MORC2Q9Y6X9 1032 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 PHLDB1Q86UU1 1377 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 DDIT3P35638 169 aa4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 TSPAN7P41732 249 aa4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 RENBPP51606 427 aa4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 PMS1P54277 932 aaKnown RBP4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 EIF5P55010 431 aaKnown RBP4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 CHAF1AQ13111 956 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 DDX10Q13206 875 aaKnown RBP4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 TCIRG1Q13488 830 aa4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 SLC9A5Q14940 896 aa4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 KRT72Q14CN4 511 aa4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 SPECC1Q5M775 1068 aa4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 WDR45BQ5MNZ6 344 aa4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 LARP1BQ659C4 914 aaKnown RBP4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 WWC2Q6AWC2 1192 aa4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 CCDC81Q6ZN84 652 aa4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 LHFPL2Q6ZUX7 228 aa4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 MAATS1Q7Z4T9 603 aa4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 NECAB2Q7Z6G3 386 aa4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 ZBTB46Q86UZ6 589 aa4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 PALM2Q8IXS6 379 aa4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 Q8N1X5 172 aa4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 NETO2Q8NC67 525 aa4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 NLGN2Q8NFZ4 835 aa4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 CPA5Q8WXQ8 436 aa4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 SMARCC1Q92922 1105 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 SYT3Q9BQG1 590 aa4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 GORASP1Q9BQQ3 440 aa4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 NT5C1AQ9BXI3 368 aa4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 FBLN5Q9UBX5 448 aa4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 MAPRE3Q9UPY8 281 aa4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 SIT1Q9Y3P8 196 aa4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 HS3ST3A1Q9Y663 406 aa4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 DGKBQ9Y6T7 804 aa4.34□□□□□ -1.71
HMGB1P12-201ENST00000438594 MEIS3P2A8K0S8 358 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 STXBP3O00186 592 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 ZBTB7AO95365 584 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 AGR2O95994 175 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 AMHP03971 560 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 C8BP07358 591 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 ACRP10323 421 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 ZSCAN20P17040 1043 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 CD247P20963 164 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 THBS2P35442 1172 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 TDO2P48775 406 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 GTF2A2P52657 109 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 NUCB1Q02818 461 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 ITKQ08881 620 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 SSRP1Q08945 709 aaKnown RBP4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 WASHC5Q12768 1159 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 PABPC4Q13310 644 aaKnown RBP eCLIP4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 BIRC3Q13489 604 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 SEPT2Q15019 361 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 DPY19L1Q2PZI1 675 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 GLIPR1L2Q4G1C9 344 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 FBXW10Q5XX13 1052 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 CXorf57Q6NSI4 855 aaKnown RBP4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 ZNF585AQ6P3V2 769 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 CRIP3Q6Q6R5 217 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 CD300LDQ6UXZ3 194 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 PPFIBP1Q86W92 1011 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 CPNE8Q86YQ8 564 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 HSCBQ8IWL3 235 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms