RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 DYDC2Q96IM9 177 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 ADGBQ8N7X0 1667 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 A0A0G2JLW4 131 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 PPFIA2O75334 1257 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 OCRLQ01968 901 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 RNF135Q8IUD6 432 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 ZNF513Q8N8E2 541 aaPredicted RBP11.11□□□□□ -0.63
SHPRH-206ENST00000438092 RAET1EQ8TD07 263 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 PAGE5Q96GU1 130 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 FSD1LQ9BXM9 530 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 KLHL8Q9P2G9 620 aaPredicted RBP11.11□□□□□ -0.63
SHPRH-206ENST00000438092 FAM135BQ49AJ0 1406 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 ZNF699Q32M78 642 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 TMEM179Q6ZVK1 233 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 STAG1Q8WVM7 1258 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 SPATA33Q96N06 139 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 ELP3Q9H9T3 547 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 SUFUQ9UMX1 484 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 PCDHA13Q9Y5I0 950 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 APOEP02649 317 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 GCLMP48507 274 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 KIF23Q02241 960 aaPredicted RBP11.11□□□□□ -0.63
SHPRH-206ENST00000438092 IFT88Q13099 833 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 ART3Q13508 389 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 ZNF667Q5HYK9 610 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 HIPK4Q8NE63 616 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 TRIM11Q96F44 468 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 SIK2Q9H0K1 926 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 ZCWPW1Q9H0M4 648 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 ORC6Q9Y5N6 252 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 GNAT1P11488 350 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 GCFC2P16383 781 aaKnown RBP11.11□□□□□ -0.63
SHPRH-206ENST00000438092 HDLBPQ00341 1268 aaKnown RBP11.11□□□□□ -0.63
SHPRH-206ENST00000438092 ZSCAN26Q16670 478 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 TTLL11Q8NHH1 800 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 SH2D3AQ9BRG2 576 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 PCSK1NQ9UHG2 260 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 HPCAL4Q9UM19 191 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 NEDD4P46934 1319 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 ARHGEF12Q9NZN5 1544 aa11.11□□□□□ -0.63
SHPRH-206ENST00000438092 KCNQ2O43526 872 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 HIP1RO75146 1068 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 DRP2Q13474 957 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 TMC4Q7Z404 712 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 PDCD7Q8N8D1 485 aaKnown RBP11.1□□□□□ -0.63
SHPRH-206ENST00000438092 TTC7AQ9ULT0 858 aaPredicted RBP11.1□□□□□ -0.63
SHPRH-206ENST00000438092 EEF1B2P24534 225 aaKnown RBP11.1□□□□□ -0.63
SHPRH-206ENST00000438092 VCPP55072 806 aaKnown RBP11.1□□□□□ -0.63
SHPRH-206ENST00000438092 TMEM62Q0P6H9 643 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 CAPRIN1Q14444 709 aaKnown RBP11.1□□□□□ -0.63
SHPRH-206ENST00000438092 CPB1P15086 417 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 COPB2P35606 906 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 MAPK6Q16659 721 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 SYCP2LQ5T4T6 812 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 PHLDB3Q6NSJ2 640 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 SAAL1Q96ER3 474 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 GABBR1Q9UBS5 961 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 CCDC195A0A1B0GUA6 201 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 TRIM49BA6NDI0 452 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 TSPY1Q01534 308 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 TMEM270Q6UE05 265 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 PIP4K2CQ8TBX8 421 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 CELF1Q92879 486 aaKnown RBP11.1□□□□□ -0.63
SHPRH-206ENST00000438092 CEP95Q96GE4 821 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 GSDMAQ96QA5 445 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 PLEKHF1Q96S99 279 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 EDEM3Q9BZQ6 932 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 ZNF302Q9NR11 478 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 HOXC10Q9NYD6 342 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 MINPP1Q9UNW1 487 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 TCOF1Q13428 1488 aaKnown RBP11.1□□□□□ -0.63
SHPRH-206ENST00000438092 NLRP1Q9C000 1473 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 EXOC1LA0A1B0GW35 172 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 HUS1O60921 280 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 CD2BP2O95400 341 aaKnown RBP11.1□□□□□ -0.63
SHPRH-206ENST00000438092 GPC3P51654 580 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 PYROXD1Q8WU10 500 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 SPON2Q9BUD6 331 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 YIPF2Q9BWQ6 316 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 ATP6V0A4Q9HBG4 840 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 ANAPC7Q9UJX3 599 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 CTSHP09668 335 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 ARHGEF1Q92888 912 aaKnown RBP11.1□□□□□ -0.63
SHPRH-206ENST00000438092 CUEDC2Q9H467 287 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 RNF146Q9NTX7 359 aa11.1□□□□□ -0.63
SHPRH-206ENST00000438092 RGS12O14924 1447 aa11.09□□□□□ -0.63
SHPRH-206ENST00000438092 LCP1P13796 627 aa11.09□□□□□ -0.63
SHPRH-206ENST00000438092 AP1B1Q10567 949 aa11.09□□□□□ -0.63
SHPRH-206ENST00000438092 ELMSAN1Q6PJG2 1045 aa11.09□□□□□ -0.63
SHPRH-206ENST00000438092 TCP11Q8WWU5 503 aa11.09□□□□□ -0.63
SHPRH-206ENST00000438092 DHX9Q08211 1270 aaKnown RBP11.09□□□□□ -0.63
SHPRH-206ENST00000438092 R3HDM1Q15032 1099 aaKnown RBP11.09□□□□□ -0.63
SHPRH-206ENST00000438092 FBXL13Q8NEE6 735 aa11.09□□□□□ -0.63
SHPRH-206ENST00000438092 COG4Q9H9E3 785 aa11.09□□□□□ -0.63
SHPRH-206ENST00000438092 EFCAB6Q5THR3 1501 aa11.09□□□□□ -0.63
SHPRH-206ENST00000438092 ERBB3P21860 1342 aa11.09□□□□□ -0.63
SHPRH-206ENST00000438092 PSMC5P62195 406 aa11.09□□□□□ -0.63
SHPRH-206ENST00000438092 CYB5R4Q7L1T6 521 aa11.09□□□□□ -0.63
SHPRH-206ENST00000438092 SHANK2Q9UPX8 1470 aa11.09□□□□□ -0.63
SHPRH-206ENST00000438092 E9PMD0 336 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms