RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 HDAC9Q9UKV0 1011 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 PLAAQ9Y263 795 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 NFS1Q9Y697 457 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 UBR3Q6ZT12 1888 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 KIF13BQ9NQT8 1826 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 UCHL3P15374 230 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 NMT1P30419 496 aaKnown RBP7.86□□□□□ -1.15
COL28A1-202ENST00000430711 MARCKSL1P49006 195 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 LLGL1Q15334 1064 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 TMEM266Q2M3C6 531 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 CRY2Q49AN0 593 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 SLC9C1Q4G0N8 1177 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 PPP4R3AQ6IN85 833 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 TADA2BQ86TJ2 420 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 ETNPPLQ8TBG4 499 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 RPGRQ92834 1020 aaKnown RBP7.86□□□□□ -1.15
COL28A1-202ENST00000430711 CCDC47Q96A33 483 aaKnown RBP7.86□□□□□ -1.15
COL28A1-202ENST00000430711 ARHGEF26Q96DR7 871 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 ALS2CR12Q96Q35 445 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 SH2D3AQ9BRG2 576 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 ANO3Q9BYT9 981 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 TRIM31Q9BZY9 425 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 CENPHQ9H3R5 247 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 ACP6Q9NPH0 428 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 NENFQ9UMX5 172 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 PLIN4Q96Q06 1357 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 FOXO6A8MYZ6 492 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 KIF3CO14782 793 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 ZBTB5O15062 677 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 TTI1O43156 1089 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 DAPK3O43293 454 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 TGFB1I1O43294 461 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 CEP104O60308 925 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 GFPT2O94808 682 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 SERPINB2P05120 415 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 TRIM49P0CI25 452 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 TRIM49CP0CI26 452 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 EEF2P13639 858 aaKnown RBP7.86□□□□□ -1.15
COL28A1-202ENST00000430711 LSP1P33241 339 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 HSD17B3P37058 310 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 ITIH3Q06033 890 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 ZNF211Q13398 564 aaPredicted RBP7.86□□□□□ -1.15
COL28A1-202ENST00000430711 PDIA5Q14554 519 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 EPHA7Q15375 998 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 ASIC2Q16515 512 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 TTC31Q49AM3 519 aaPredicted RBP7.86□□□□□ -1.15
COL28A1-202ENST00000430711 RC3H1Q5TC82 1133 aaKnown RBP7.86□□□□□ -1.15
COL28A1-202ENST00000430711 IQCEQ6IPM2 695 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 APOBEC3HQ6NTF7 200 aaKnown RBP7.86□□□□□ -1.15
COL28A1-202ENST00000430711 CCDC84Q86UT8 332 aaPredicted RBP7.86□□□□□ -1.15
COL28A1-202ENST00000430711 ZC3H3Q8IXZ2 948 aaKnown RBP7.86□□□□□ -1.15
COL28A1-202ENST00000430711 ZDHHC14Q8IZN3 488 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 SPICE1Q8N0Z3 855 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 CRYGNQ8WXF5 182 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 DCBLD2Q96PD2 775 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 ACBD3Q9H3P7 528 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 USP40Q9NVE5 1235 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 NAGPAQ9UK23 515 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 NOC2LQ9Y3T9 749 aaKnown RBP7.86□□□□□ -1.15
COL28A1-202ENST00000430711 QSER1Q2KHR3 1735 aa7.86□□□□□ -1.15
COL28A1-202ENST00000430711 FRMD3A2A2Y4 597 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 KIF4AO95239 1232 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 TTLL1O95922 423 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 CALCAP01258 141 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 SHBGP04278 402 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 TUBBP07437 444 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 LDHCP07864 332 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 TUBB4BP68371 445 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 SKOR1P84550 965 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 ZNF844Q08AG5 666 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 ITGB3BPQ13352 177 aaPredicted RBP7.85□□□□□ -1.15
COL28A1-202ENST00000430711 BYSLQ13895 437 aaKnown RBP7.85□□□□□ -1.15
COL28A1-202ENST00000430711 CTTNQ14247 550 aaKnown RBP7.85□□□□□ -1.15
COL28A1-202ENST00000430711 SEPT2Q15019 361 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 CDC37Q16543 378 aaPredicted RBP7.85□□□□□ -1.15
COL28A1-202ENST00000430711 CFAP221Q4G0U5 840 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 CBWD6Q4V339 395 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 ASPRV1Q53RT3 343 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 CBWD3Q5JTY5 395 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 CBWD5Q5RIA9 395 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 CEP85LQ5SZL2 805 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 HYIQ5T013 277 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 TRAPPC3LQ5T215 181 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 EMBQ6PCB8 327 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 EPM2AIP1Q7L775 607 aaPredicted RBP7.85□□□□□ -1.15
COL28A1-202ENST00000430711 GOLGA6L1Q8N7Z2 621 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 CUL5Q93034 780 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 SLC35C1Q96A29 364 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 GPR88Q9GZN0 384 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 DPH5Q9H2P9 285 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 DBNDD1Q9H9R9 158 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 AIPL1Q9NZN9 384 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 SERPINB13Q9UIV8 391 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 PPP1R9AQ9ULJ8 1098 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 PCDHB8Q9UN66 801 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 COG5Q9UP83 839 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 PCDHB13Q9Y5F0 798 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 PCDHA1Q9Y5I3 950 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 CHMP2AO43633 222 aa7.85□□□□□ -1.15
COL28A1-202ENST00000430711 MARCH6O60337 910 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms