RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 BTG3Q14201 252 aaPredicted RBP10.3□□□□□ -0.76
HDAC9-211ENST00000430454 TCTN1Q2MV58 587 aa10.3□□□□□ -0.76
HDAC9-211ENST00000430454 EPC2Q52LR7 807 aa10.3□□□□□ -0.76
HDAC9-211ENST00000430454 TIGD5Q53EQ6 642 aa10.3□□□□□ -0.76
HDAC9-211ENST00000430454 NPAS4Q8IUM7 802 aa10.3□□□□□ -0.76
HDAC9-211ENST00000430454 CCDC60Q8IWA6 550 aaPredicted RBP10.3□□□□□ -0.76
HDAC9-211ENST00000430454 TMEM192Q8IY95 271 aa10.3□□□□□ -0.76
HDAC9-211ENST00000430454 EXOC8Q8IYI6 725 aa10.3□□□□□ -0.76
HDAC9-211ENST00000430454 METTL13Q8N6R0 699 aa10.3□□□□□ -0.76
HDAC9-211ENST00000430454 RASGRP4Q8TDF6 673 aa10.3□□□□□ -0.76
HDAC9-211ENST00000430454 TBCKQ8TEA7 893 aa10.3□□□□□ -0.76
HDAC9-211ENST00000430454 SLC5A5Q92911 643 aa10.3□□□□□ -0.76
HDAC9-211ENST00000430454 PPP2R3CQ969Q6 453 aa10.3□□□□□ -0.76
HDAC9-211ENST00000430454 JPH2Q9BR39 696 aaPredicted RBP10.3□□□□□ -0.76
HDAC9-211ENST00000430454 C11orf84Q9BUA3 381 aaPredicted RBP10.3□□□□□ -0.76
HDAC9-211ENST00000430454 LMAN2LQ9H0V9 348 aa10.3□□□□□ -0.76
HDAC9-211ENST00000430454 SUGCTQ9HAC7 445 aa10.3□□□□□ -0.76
HDAC9-211ENST00000430454 C1orf112Q9NSG2 853 aa10.3□□□□□ -0.76
HDAC9-211ENST00000430454 GABBR1Q9UBS5 961 aa10.3□□□□□ -0.76
HDAC9-211ENST00000430454 IGSF9BQ9UPX0 1349 aa10.3□□□□□ -0.76
HDAC9-211ENST00000430454 TET1Q8NFU7 2136 aa10.3□□□□□ -0.76
HDAC9-211ENST00000430454 DOCK5Q9H7D0 1870 aa10.3□□□□□ -0.76
HDAC9-211ENST00000430454 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.29□□□□□ -0.76
HDAC9-211ENST00000430454 DENND3A2RUS2 1198 aa10.29□□□□□ -0.76
HDAC9-211ENST00000430454 H3BNC9 293 aa10.29□□□□□ -0.76
HDAC9-211ENST00000430454 TNFRSF10AO00220 468 aa10.29□□□□□ -0.76
HDAC9-211ENST00000430454 MSH4O15457 936 aa10.29□□□□□ -0.76
HDAC9-211ENST00000430454 BAG4O95429 457 aaKnown RBP10.29□□□□□ -0.76
HDAC9-211ENST00000430454 OATP04181 439 aa10.29□□□□□ -0.76
HDAC9-211ENST00000430454 CD52P31358 61 aa10.29□□□□□ -0.76
HDAC9-211ENST00000430454 CRYBB1P53674 252 aaPredicted RBP10.29□□□□□ -0.76
HDAC9-211ENST00000430454 TMEM62Q0P6H9 643 aa10.29□□□□□ -0.76
HDAC9-211ENST00000430454 NFX1Q12986 1120 aaKnown RBP10.29□□□□□ -0.76
HDAC9-211ENST00000430454 GPM6BQ13491 265 aa10.29□□□□□ -0.76
HDAC9-211ENST00000430454 NAALADL2Q58DX5 795 aa10.29□□□□□ -0.76
HDAC9-211ENST00000430454 MIER3Q7Z3K6 550 aa10.29□□□□□ -0.76
HDAC9-211ENST00000430454 ADAMTS19Q8TE59 1207 aa10.29□□□□□ -0.76
HDAC9-211ENST00000430454 TRAPPC12Q8WVT3 735 aa10.29□□□□□ -0.76
HDAC9-211ENST00000430454 MRPL38Q96DV4 380 aaKnown RBP10.29□□□□□ -0.76
HDAC9-211ENST00000430454 FAM20AQ96MK3 541 aa10.29□□□□□ -0.76
HDAC9-211ENST00000430454 PLVAPQ9BX97 442 aa10.29□□□□□ -0.76
HDAC9-211ENST00000430454 AAASQ9NRG9 546 aa10.29□□□□□ -0.76
HDAC9-211ENST00000430454 DDX25Q9UHL0 483 aaKnown RBP10.29□□□□□ -0.76
HDAC9-211ENST00000430454 PADI3Q9ULW8 664 aa10.29□□□□□ -0.76
HDAC9-211ENST00000430454 FAM50BQ9Y247 325 aa10.29□□□□□ -0.76
HDAC9-211ENST00000430454 GINS2Q9Y248 185 aa10.29□□□□□ -0.76
HDAC9-211ENST00000430454 PCDHB7Q9Y5E2 793 aa10.29□□□□□ -0.76
HDAC9-211ENST00000430454 ADGRA3Q8IWK6 1321 aa10.29□□□□□ -0.76
HDAC9-211ENST00000430454 MYO9BQ13459 2157 aa10.28□□□□□ -0.76
HDAC9-211ENST00000430454 EPOPA6NHQ4 379 aa10.28□□□□□ -0.76
HDAC9-211ENST00000430454 HOXA2O43364 376 aa10.28□□□□□ -0.76
HDAC9-211ENST00000430454 CHMP2AO43633 222 aa10.28□□□□□ -0.76
HDAC9-211ENST00000430454 PPFIA3O75145 1194 aa10.28□□□□□ -0.76
HDAC9-211ENST00000430454 ZSCAN20P17040 1043 aaPredicted RBP10.28□□□□□ -0.76
HDAC9-211ENST00000430454 CTNNB1P35222 781 aa10.28□□□□□ -0.76
HDAC9-211ENST00000430454 TBC1D8BQ0IIM8 1120 aa10.28□□□□□ -0.76
HDAC9-211ENST00000430454 PUS10Q3MIT2 529 aaKnown RBP10.28□□□□□ -0.76
HDAC9-211ENST00000430454 NEK8Q86SG6 692 aa10.28□□□□□ -0.76
HDAC9-211ENST00000430454 CMTR2Q8IYT2 770 aaKnown RBP10.28□□□□□ -0.76
HDAC9-211ENST00000430454 KIAA0319LQ8IZA0 1049 aa10.28□□□□□ -0.76
HDAC9-211ENST00000430454 GDPD5Q8WTR4 605 aa10.28□□□□□ -0.76
HDAC9-211ENST00000430454 LENG9Q96B70 501 aa10.28□□□□□ -0.76
HDAC9-211ENST00000430454 SCLT1Q96NL6 688 aa10.28□□□□□ -0.76
HDAC9-211ENST00000430454 C17orf80Q9BSJ5 609 aa10.28□□□□□ -0.76
HDAC9-211ENST00000430454 ORC3Q9UBD5 711 aaPredicted RBP10.28□□□□□ -0.76
HDAC9-211ENST00000430454 AKT3Q9Y243 479 aa10.28□□□□□ -0.76
HDAC9-211ENST00000430454 PPME1Q9Y570 386 aa10.28□□□□□ -0.76
HDAC9-211ENST00000430454 COL4A6Q14031 1691 aa10.28□□□□□ -0.76
HDAC9-211ENST00000430454 TBX3O15119 743 aa10.27□□□□□ -0.77
HDAC9-211ENST00000430454 LPXNO60711 386 aa10.27□□□□□ -0.77
HDAC9-211ENST00000430454 ARHGEF15O94989 841 aa10.27□□□□□ -0.77
HDAC9-211ENST00000430454 C22orf31O95567 290 aa10.27□□□□□ -0.77
HDAC9-211ENST00000430454 BMPR1AP36894 532 aa10.27□□□□□ -0.77
HDAC9-211ENST00000430454 SARSP49591 514 aaKnown RBP10.27□□□□□ -0.77
HDAC9-211ENST00000430454 AK2P54819 239 aa10.27□□□□□ -0.77
HDAC9-211ENST00000430454 PRKCEQ02156 737 aa10.27□□□□□ -0.77
HDAC9-211ENST00000430454 SCRN1Q12765 414 aa10.27□□□□□ -0.77
HDAC9-211ENST00000430454 SAFBQ15424 915 aaKnown RBP eCLIP10.27□□□□□ -0.77
HDAC9-211ENST00000430454 CSPP1Q1MSJ5 1256 aa10.27□□□□□ -0.77
HDAC9-211ENST00000430454 LETM2Q2VYF4 491 aa10.27□□□□□ -0.77
HDAC9-211ENST00000430454 XKR3Q5GH77 459 aa10.27□□□□□ -0.77
HDAC9-211ENST00000430454 PPP4R3AQ6IN85 833 aa10.27□□□□□ -0.77
HDAC9-211ENST00000430454 EFCAB12Q6NXP0 572 aa10.27□□□□□ -0.77
HDAC9-211ENST00000430454 SLC24A5Q71RS6 500 aa10.27□□□□□ -0.77
HDAC9-211ENST00000430454 TRMT1LQ7Z2T5 733 aaKnown RBP10.27□□□□□ -0.77
HDAC9-211ENST00000430454 SLFN12Q8IYM2 578 aa10.27□□□□□ -0.77
HDAC9-211ENST00000430454 UIMC1Q96RL1 719 aa10.27□□□□□ -0.77
HDAC9-211ENST00000430454 UHRF1Q96T88 793 aaPredicted RBP10.27□□□□□ -0.77
HDAC9-211ENST00000430454 LARP6Q9BRS8 491 aaKnown RBP10.27□□□□□ -0.77
HDAC9-211ENST00000430454 PHF20Q9BVI0 1012 aa10.27□□□□□ -0.77
HDAC9-211ENST00000430454 INO80BQ9C086 356 aaPredicted RBP10.27□□□□□ -0.77
HDAC9-211ENST00000430454 AGO3Q9H9G7 860 aaKnown RBP10.27□□□□□ -0.77
HDAC9-211ENST00000430454 PRDM6Q9NQX0 595 aa10.27□□□□□ -0.77
HDAC9-211ENST00000430454 TPCN1Q9ULQ1 816 aa10.27□□□□□ -0.77
HDAC9-211ENST00000430454 MICAL3Q7RTP6 2002 aa10.26□□□□□ -0.77
HDAC9-211ENST00000430454 CARNS1A5YM72 827 aa10.26□□□□□ -0.77
HDAC9-211ENST00000430454 C5orf67F2Z3F1 127 aa10.26□□□□□ -0.77
HDAC9-211ENST00000430454 CCNT1O60563 726 aaKnown RBP10.26□□□□□ -0.77
HDAC9-211ENST00000430454 PSMD10O75832 226 aa10.26□□□□□ -0.77
HDAC9-211ENST00000430454 DGKIO75912 1065 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms