RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 GPS2Q13227 327 aa10.61□□□□□ -0.71
NEDD1-203ENST00000429527 TPRNQ4KMQ1 711 aa10.61□□□□□ -0.71
NEDD1-203ENST00000429527 ZNF658Q5TYW1 1059 aaPredicted RBP10.61□□□□□ -0.71
NEDD1-203ENST00000429527 MCTP2Q6DN12 878 aa10.61□□□□□ -0.71
NEDD1-203ENST00000429527 CYP26C1Q6V0L0 522 aa10.61□□□□□ -0.71
NEDD1-203ENST00000429527 NSUN6Q8TEA1 469 aaKnown RBP10.61□□□□□ -0.71
NEDD1-203ENST00000429527 THAP9Q9H5L6 903 aa10.61□□□□□ -0.71
NEDD1-203ENST00000429527 PXMP2Q9NR77 195 aa10.61□□□□□ -0.71
NEDD1-203ENST00000429527 TOMM22Q9NS69 142 aa10.61□□□□□ -0.71
NEDD1-203ENST00000429527 A0A0U1RQG5 324 aaPredicted RBP10.61□□□□□ -0.71
NEDD1-203ENST00000429527 ESYT2A0FGR8 921 aa10.61□□□□□ -0.71
NEDD1-203ENST00000429527 ZEB2O60315 1214 aa10.61□□□□□ -0.71
NEDD1-203ENST00000429527 HOXC8P31273 242 aa10.61□□□□□ -0.71
NEDD1-203ENST00000429527 C1orf131Q8NDD1 294 aaKnown RBP10.61□□□□□ -0.71
NEDD1-203ENST00000429527 NUP133Q8WUM0 1156 aa10.61□□□□□ -0.71
NEDD1-203ENST00000429527 RMND1Q9NWS8 449 aa10.61□□□□□ -0.71
NEDD1-203ENST00000429527 REXO2Q9Y3B8 237 aaKnown RBP10.61□□□□□ -0.71
NEDD1-203ENST00000429527 EEF1GP26641 437 aaKnown RBP10.6□□□□□ -0.71
NEDD1-203ENST00000429527 KRT2P35908 639 aa10.6□□□□□ -0.71
NEDD1-203ENST00000429527 PRPHP41219 470 aa10.6□□□□□ -0.71
NEDD1-203ENST00000429527 PPP1R2P41236 205 aa10.6□□□□□ -0.71
NEDD1-203ENST00000429527 TNFAIP2Q03169 654 aa10.6□□□□□ -0.71
NEDD1-203ENST00000429527 PRAMEF19Q5SWL8 479 aa10.6□□□□□ -0.71
NEDD1-203ENST00000429527 WDR78Q5VTH9 848 aa10.6□□□□□ -0.71
NEDD1-203ENST00000429527 SLC26A6Q9BXS9 759 aa10.6□□□□□ -0.71
NEDD1-203ENST00000429527 GLT8D2Q9H1C3 349 aa10.6□□□□□ -0.71
NEDD1-203ENST00000429527 CUEDC2Q9H467 287 aa10.6□□□□□ -0.71
NEDD1-203ENST00000429527 PDLIM7Q9NR12 457 aa10.6□□□□□ -0.71
NEDD1-203ENST00000429527 COL20A1Q9P218 1284 aa10.6□□□□□ -0.71
NEDD1-203ENST00000429527 FEZ2Q9UHY8 353 aaPredicted RBP10.6□□□□□ -0.71
NEDD1-203ENST00000429527 ADAM21Q9UKJ8 722 aa10.6□□□□□ -0.71
NEDD1-203ENST00000429527 TBX21Q9UL17 535 aa10.6□□□□□ -0.71
NEDD1-203ENST00000429527 EIF3JO75822 258 aaKnown RBP10.6□□□□□ -0.71
NEDD1-203ENST00000429527 IVLP07476 585 aa10.6□□□□□ -0.71
NEDD1-203ENST00000429527 TGFB3P10600 412 aa10.6□□□□□ -0.71
NEDD1-203ENST00000429527 ACTN2P35609 894 aa10.6□□□□□ -0.71
NEDD1-203ENST00000429527 LONP1P36776 959 aaKnown RBP10.6□□□□□ -0.71
NEDD1-203ENST00000429527 RAD51AP2Q09MP3 1159 aa10.6□□□□□ -0.71
NEDD1-203ENST00000429527 RASIP1Q5U651 963 aa10.6□□□□□ -0.71
NEDD1-203ENST00000429527 IGSF22Q8N9C0 903 aa10.6□□□□□ -0.71
NEDD1-203ENST00000429527 CTCFLQ8NI51 663 aaPredicted RBP10.6□□□□□ -0.71
NEDD1-203ENST00000429527 SCFD2Q8WU76 684 aa10.6□□□□□ -0.71
NEDD1-203ENST00000429527 MTRQ99707 1265 aa10.6□□□□□ -0.71
NEDD1-203ENST00000429527 CAPN11Q9UMQ6 739 aa10.6□□□□□ -0.71
NEDD1-203ENST00000429527 SOWAHDA6NJG2 315 aa10.6□□□□□ -0.71
NEDD1-203ENST00000429527 LAD1O00515 517 aa10.6□□□□□ -0.71
NEDD1-203ENST00000429527 KIF5CO60282 957 aa10.6□□□□□ -0.71
NEDD1-203ENST00000429527 ERLIN1O75477 346 aa10.6□□□□□ -0.71
NEDD1-203ENST00000429527 FOSBP53539 338 aa10.6□□□□□ -0.71
NEDD1-203ENST00000429527 IRF2BP1Q8IU81 584 aa10.6□□□□□ -0.71
NEDD1-203ENST00000429527 PNKPQ96T60 521 aa10.6□□□□□ -0.71
NEDD1-203ENST00000429527 NAPGQ99747 312 aaPredicted RBP10.6□□□□□ -0.71
NEDD1-203ENST00000429527 ARID3AQ99856 593 aa10.6□□□□□ -0.71
NEDD1-203ENST00000429527 CTAGE9A4FU28 777 aa10.59□□□□□ -0.71
NEDD1-203ENST00000429527 ARVCFO00192 962 aa10.59□□□□□ -0.71
NEDD1-203ENST00000429527 TEX33O43247 280 aa10.59□□□□□ -0.71
NEDD1-203ENST00000429527 SEC31AO94979 1220 aaKnown RBP10.59□□□□□ -0.71
NEDD1-203ENST00000429527 TCP11X2Q5H9J9 407 aa10.59□□□□□ -0.71
NEDD1-203ENST00000429527 GALNT17Q6IS24 598 aa10.59□□□□□ -0.71
NEDD1-203ENST00000429527 VSIG10LQ86VR7 867 aa10.59□□□□□ -0.71
NEDD1-203ENST00000429527 MICU3Q86XE3 530 aa10.59□□□□□ -0.71
NEDD1-203ENST00000429527 HAUS4Q9H6D7 363 aa10.59□□□□□ -0.71
NEDD1-203ENST00000429527 TMEM265A0A087WTH1 108 aa10.59□□□□□ -0.71
NEDD1-203ENST00000429527 HAS3O00219 553 aa10.59□□□□□ -0.71
NEDD1-203ENST00000429527 CLK2P49760 499 aaKnown RBP10.59□□□□□ -0.71
NEDD1-203ENST00000429527 ADKP55263 362 aaKnown RBP10.59□□□□□ -0.71
NEDD1-203ENST00000429527 IKQ13123 557 aaPredicted RBP10.59□□□□□ -0.71
NEDD1-203ENST00000429527 KRT31Q15323 416 aa10.59□□□□□ -0.71
NEDD1-203ENST00000429527 FAM126BQ8IXS8 530 aa10.59□□□□□ -0.71
NEDD1-203ENST00000429527 CCDC170Q8IYT3 715 aa10.59□□□□□ -0.71
NEDD1-203ENST00000429527 SPC25Q9HBM1 224 aa10.59□□□□□ -0.71
NEDD1-203ENST00000429527 SRRM3A6NNA2 597 aaPredicted RBP10.59□□□□□ -0.71
NEDD1-203ENST00000429527 LGALS16A8MUM7 142 aa10.59□□□□□ -0.71
NEDD1-203ENST00000429527 CPT1AP50416 773 aa10.59□□□□□ -0.71
NEDD1-203ENST00000429527 FXR1P51114 621 aaKnown RBP eCLIP10.59□□□□□ -0.71
NEDD1-203ENST00000429527 PCNX4Q63HM2 1172 aa10.59□□□□□ -0.71
NEDD1-203ENST00000429527 NFRKBQ6P4R8 1299 aa10.59□□□□□ -0.71
NEDD1-203ENST00000429527 NIPA1Q7RTP0 329 aa10.59□□□□□ -0.71
NEDD1-203ENST00000429527 ADSSL1Q8N142 457 aa10.59□□□□□ -0.71
NEDD1-203ENST00000429527 SRBD1Q8N5C6 995 aaKnown RBP10.59□□□□□ -0.71
NEDD1-203ENST00000429527 CCSER1Q9C0I3 900 aa10.59□□□□□ -0.71
NEDD1-203ENST00000429527 UBA5Q9GZZ9 404 aa10.59□□□□□ -0.71
NEDD1-203ENST00000429527 RHOBTB3O94955 611 aa10.58□□□□□ -0.72
NEDD1-203ENST00000429527 GOLGA8HP0CJ92 632 aa10.58□□□□□ -0.72
NEDD1-203ENST00000429527 EPB41P11171 864 aaKnown RBP10.58□□□□□ -0.72
NEDD1-203ENST00000429527 XBP1P17861 261 aa10.58□□□□□ -0.72
NEDD1-203ENST00000429527 COPB1P53618 953 aaKnown RBP10.58□□□□□ -0.72
NEDD1-203ENST00000429527 ARHGAP1Q07960 439 aa10.58□□□□□ -0.72
NEDD1-203ENST00000429527 KCNA10Q16322 511 aa10.58□□□□□ -0.72
NEDD1-203ENST00000429527 GJC2Q5T442 439 aaPredicted RBP10.58□□□□□ -0.72
NEDD1-203ENST00000429527 TLK2Q86UE8 772 aa10.58□□□□□ -0.72
NEDD1-203ENST00000429527 OXER1Q8TDS5 423 aa10.58□□□□□ -0.72
NEDD1-203ENST00000429527 CRYGNQ8WXF5 182 aa10.58□□□□□ -0.72
NEDD1-203ENST00000429527 SYMPKQ92797 1274 aaKnown RBP10.58□□□□□ -0.72
NEDD1-203ENST00000429527 RRP36Q96EU6 259 aaKnown RBP10.58□□□□□ -0.72
NEDD1-203ENST00000429527 INPP4AQ96PE3 977 aaPredicted RBP10.58□□□□□ -0.72
NEDD1-203ENST00000429527 SH3GL2Q99962 352 aa10.58□□□□□ -0.72
NEDD1-203ENST00000429527 PDCD2LQ9BRP1 358 aa10.58□□□□□ -0.72
NEDD1-203ENST00000429527 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.58□□□□□ -0.72
NEDD1-203ENST00000429527 MYADML2A6NDP7 307 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms