RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 SHBGP04278 402 aa9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 PDIA3P30101 505 aaKnown RBP9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 CDC25AP30304 524 aa9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 EMP3P54852 163 aa9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 RTP1P59025 263 aa9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 KRT31Q15323 416 aa9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 TTF1Q15361 905 aaPredicted RBP9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 CWF19L2Q2TBE0 894 aaKnown RBP9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 KRT71Q3SY84 523 aa9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 KSR2Q6VAB6 950 aa9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 ZC3H18Q86VM9 953 aaKnown RBP9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 CACTIN-AS1Q8N1I8 211 aa9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 SLC17A8Q8NDX2 589 aa9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 FAM13CQ8NE31 585 aa9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 OR2W6PQ8NHA6 318 aa9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 USP33Q8TEY7 942 aa9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 SCG3Q8WXD2 468 aaKnown RBP9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 SRPK1Q96SB4 655 aaKnown RBP9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 ASCC2Q9H1I8 757 aaPredicted RBP9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 PKD1L3Q7Z443 1732 aa9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 MRC1P22897 1456 aa9.59□□□□□ -0.88
CDC42BPA-206ENST00000429440 A0A1W2PQC6 194 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 TTC26A0AVF1 554 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 MACROD2A1Z1Q3 448 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 ZSCAN5CA6NGD5 496 aaPredicted RBP9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 MATN2O00339 956 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 FOXN1O15353 648 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 MGEA5O60502 916 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 AFPP02771 609 aaKnown RBP9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 GSTT2P0CG29 244 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 GSTT2BP0CG30 244 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 COPB1P53618 953 aaKnown RBP9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 EXOSC10Q01780 885 aaKnown RBP9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 ZNF827Q17R98 1081 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 SH3D19Q5HYK7 790 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 SNX30Q5VWJ9 437 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 ANKRD13BQ86YJ7 626 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 FBXL16Q8N461 479 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 FITM2Q8N6M3 262 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 FNDC8Q8TC99 324 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 TRPC4APQ8TEL6 797 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 NELFBQ8WX92 580 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 PGM2Q96G03 612 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 MPP4Q96JB8 637 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 INTS9Q9NV88 658 aaKnown RBP9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 STK32BQ9NY57 414 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 UTYO14607 1347 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 XIRP1Q702N8 1843 aaKnown RBP9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 BHMG1C9JSJ3 638 aaPredicted RBP9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 CBFA2T3O75081 653 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 PYGMP11217 842 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 ECHS1P30084 290 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 TXKP42681 527 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 ZC2HC1CQ53FD0 456 aaPredicted RBP9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 TTC39AQ5SRH9 613 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 NFRKBQ6P4R8 1299 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 LRP10Q7Z4F1 713 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 PPFIBP2Q8ND30 876 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 SUPT20HQ8NEM7 779 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 CASP10Q92851 521 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 SH2D4AQ9H788 454 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 PRKAG3Q9UGI9 489 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 TFR2Q9UP52 801 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 ZNF711Q9Y462 761 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 PASKQ96RG2 1323 aa9.58□□□□□ -0.88
CDC42BPA-206ENST00000429440 MYCLP1P12525 358 aaPredicted RBP9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 GNAT2P19087 354 aa9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 TNNC1P63316 161 aa9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 SLC39A6Q13433 755 aa9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 EAPPQ56P03 285 aaPredicted RBP9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 RNF43Q68DV7 783 aa9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 CCDC174Q6PII3 467 aa9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 ST13P4Q8IZP2 240 aaPredicted RBP9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 ADAM7Q9H2U9 754 aa9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 SCHIP1Q9P0W5 487 aaPredicted RBP9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 PNMA3Q9UL41 463 aa9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 TRIM33Q9UPN9 1127 aa9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 DUSP10Q9Y6W6 482 aa9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 DCCP43146 1447 aa9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 KIF28PB7ZC32 967 aa9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 ZFYP08048 801 aaPredicted RBP9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 POTEIP0CG38 1075 aa9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 CDK4P11802 303 aa9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 AP1B1Q10567 949 aa9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 SAFBQ15424 915 aaKnown RBP eCLIP9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 GJC2Q5T442 439 aaPredicted RBP9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 ZNF790Q6PG37 636 aa9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 CROCCP2Q86T23 111 aa9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 PASD1Q8IV76 773 aa9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 CROCCP3Q8IVE0 287 aa9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 ZBED8Q8IZ13 594 aa9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 GAB3Q8WWW8 586 aa9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 DGCR14Q96DF8 476 aaKnown RBP9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 MAP3K14Q99558 947 aa9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 ZNF184Q99676 751 aaPredicted RBP9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 CCT7Q99832 543 aa9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 NACAP1Q9BZK3 213 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms