RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 LRRIQ3A6PVS8 624 aaPredicted RBP12.56□□□□□ -0.4
CECR3-201ENST00000428828 EIF3HO15372 352 aaKnown RBP eCLIP12.56□□□□□ -0.4
CECR3-201ENST00000428828 MARCH6O60337 910 aa12.56□□□□□ -0.4
CECR3-201ENST00000428828 ITGB5P18084 799 aa12.56□□□□□ -0.4
CECR3-201ENST00000428828 CCT5P48643 541 aa12.56□□□□□ -0.4
CECR3-201ENST00000428828 FLT3LGP49771 235 aa12.56□□□□□ -0.4
CECR3-201ENST00000428828 SLC8A3P57103 927 aa12.56□□□□□ -0.4
CECR3-201ENST00000428828 VSNL1P62760 191 aa12.56□□□□□ -0.4
CECR3-201ENST00000428828 ADCY2Q08462 1091 aa12.56□□□□□ -0.4
CECR3-201ENST00000428828 PTGDRQ13258 359 aa12.56□□□□□ -0.4
CECR3-201ENST00000428828 BIRC2Q13490 618 aa12.56□□□□□ -0.4
CECR3-201ENST00000428828 CALCRLQ16602 461 aa12.56□□□□□ -0.4
CECR3-201ENST00000428828 CEP55Q53EZ4 464 aa12.56□□□□□ -0.4
CECR3-201ENST00000428828 SEPT14Q6ZU15 432 aa12.56□□□□□ -0.4
CECR3-201ENST00000428828 VSIG10LQ86VR7 867 aa12.56□□□□□ -0.4
CECR3-201ENST00000428828 FBXO16Q8IX29 292 aaPredicted RBP12.56□□□□□ -0.4
CECR3-201ENST00000428828 FAM76AQ8TAV0 307 aa12.56□□□□□ -0.4
CECR3-201ENST00000428828 N4BP2L2Q92802 583 aaPredicted RBP12.56□□□□□ -0.4
CECR3-201ENST00000428828 CLIC6Q96NY7 704 aa12.56□□□□□ -0.4
CECR3-201ENST00000428828 IWS1Q96ST2 819 aa12.56□□□□□ -0.4
CECR3-201ENST00000428828 NAP1L4Q99733 375 aaKnown RBP12.56□□□□□ -0.4
CECR3-201ENST00000428828 TMEM60Q9H2L4 133 aa12.56□□□□□ -0.4
CECR3-201ENST00000428828 FLRT1Q9NZU1 646 aa12.56□□□□□ -0.4
CECR3-201ENST00000428828 MYO1AQ9UBC5 1043 aa12.56□□□□□ -0.4
CECR3-201ENST00000428828 ODF2LQ9ULJ1 636 aa12.56□□□□□ -0.4
CECR3-201ENST00000428828 CEP131Q9UPN4 1083 aa12.56□□□□□ -0.4
CECR3-201ENST00000428828 ASB14A6NK59 587 aa12.55□□□□□ -0.4
CECR3-201ENST00000428828 B4DLN1 442 aa12.55□□□□□ -0.4
CECR3-201ENST00000428828 SORBS3O60504 671 aa12.55□□□□□ -0.4
CECR3-201ENST00000428828 MTMR1Q13613 665 aa12.55□□□□□ -0.4
CECR3-201ENST00000428828 PPP4R3AQ6IN85 833 aa12.55□□□□□ -0.4
CECR3-201ENST00000428828 MICALCLQ6ZW33 695 aa12.55□□□□□ -0.4
CECR3-201ENST00000428828 USP6NLQ92738 828 aa12.55□□□□□ -0.4
CECR3-201ENST00000428828 MXRA8Q9BRK3 442 aa12.55□□□□□ -0.4
CECR3-201ENST00000428828 SDF4Q9BRK5 362 aa12.55□□□□□ -0.4
CECR3-201ENST00000428828 NAA15Q9BXJ9 866 aaKnown RBP12.55□□□□□ -0.4
CECR3-201ENST00000428828 HSD3B7Q9H2F3 369 aa12.55□□□□□ -0.4
CECR3-201ENST00000428828 IGLV3-22A0A075B6J6 115 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 TARSL2A2RTX5 802 aaKnown RBP12.54□□□□□ -0.4
CECR3-201ENST00000428828 CTAGE15A4D2H0 777 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 TTC36A6NLP5 189 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 CCDC175P0C221 793 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 CTAGE8P0CG41 777 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 ARP10275 920 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 EDNRBP24530 442 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 CIITAP33076 1130 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 MYL5Q02045 173 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 PTPAQ15257 358 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 CTAGE6Q86UF2 777 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 CTAGE4Q8IX94 777 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 IGSF22Q8N9C0 903 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 LINC00301Q8NCQ3 95 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 TATDN2Q93075 761 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 LENG9Q96B70 501 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 SH3GL3Q99963 347 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 TINF2Q9BSI4 451 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 HPCAL4Q9UM19 191 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 UBIAD1Q9Y5Z9 338 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 HTTP42858 3142 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 CYP3A7-CYP3A51PA0A087WV96 503 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 SRRM3A6NNA2 597 aaPredicted RBP12.54□□□□□ -0.4
CECR3-201ENST00000428828 SPTLC2O15270 562 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 MEFVO15553 781 aaPredicted RBP12.54□□□□□ -0.4
CECR3-201ENST00000428828 KIF5CO60282 957 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 NEBLO76041 1014 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 RGS20O76081 388 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 KIAA0754O94854 1291 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 OR52Z1P0C646 297 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 CYP3A7P24462 503 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 TXKP42681 527 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 ME1P48163 572 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 SLC39A14Q15043 492 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 Q4G0T1 1027 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 MOXD1Q6UVY6 613 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 NLRX1Q86UT6 975 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 COG1Q8WTW3 980 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 SH3GL2Q99962 352 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 BATF3Q9NR55 127 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 KCNH7Q9NS40 1196 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.54□□□□□ -0.4
CECR3-201ENST00000428828 SRRDQ9UH36 339 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 DIS3Q9Y2L1 958 aaKnown RBP12.54□□□□□ -0.4
CECR3-201ENST00000428828 SH3BP1Q9Y3L3 701 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 TRIM17Q9Y577 477 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 CAPN7Q9Y6W3 813 aa12.54□□□□□ -0.4
CECR3-201ENST00000428828 DDX39AO00148 427 aaKnown RBP12.53□□□□□ -0.4
CECR3-201ENST00000428828 MEIS1O00470 390 aa12.53□□□□□ -0.4
CECR3-201ENST00000428828 FOXN1O15353 648 aa12.53□□□□□ -0.4
CECR3-201ENST00000428828 MSH4O15457 936 aa12.53□□□□□ -0.4
CECR3-201ENST00000428828 RASSF9O75901 435 aa12.53□□□□□ -0.4
CECR3-201ENST00000428828 YEATS4O95619 227 aa12.53□□□□□ -0.4
CECR3-201ENST00000428828 HOXC6P09630 235 aa12.53□□□□□ -0.4
CECR3-201ENST00000428828 HSPA1AP0DMV8 641 aaKnown RBP12.53□□□□□ -0.4
CECR3-201ENST00000428828 HSPA1BP0DMV9 641 aaKnown RBP12.53□□□□□ -0.4
CECR3-201ENST00000428828 ELNP15502 786 aa12.53□□□□□ -0.4
CECR3-201ENST00000428828 HOXD10P28358 340 aa12.53□□□□□ -0.4
CECR3-201ENST00000428828 SKOR1P84550 965 aa12.53□□□□□ -0.4
CECR3-201ENST00000428828 ATP2C1P98194 919 aaPredicted RBP12.53□□□□□ -0.4
CECR3-201ENST00000428828 GNPTABQ3T906 1256 aa12.53□□□□□ -0.4
CECR3-201ENST00000428828 XRRA1Q6P2D8 792 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms