RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 TINF2Q9BSI4 451 aa7.72□□□□□ -1.17
C9orf3-205ENST00000427193 ASH2LQ9UBL3 628 aa7.72□□□□□ -1.17
C9orf3-205ENST00000427193 CEP350Q5VT06 3117 aa7.72□□□□□ -1.17
C9orf3-205ENST00000427193 NRXN1Q9ULB1 1477 aa7.72□□□□□ -1.17
C9orf3-205ENST00000427193 PIK3R4Q99570 1358 aa7.71□□□□□ -1.17
C9orf3-205ENST00000427193 PTCH1Q13635 1447 aa7.71□□□□□ -1.17
C9orf3-205ENST00000427193 MLLT6P55198 1093 aaPredicted RBP7.71□□□□□ -1.18
C9orf3-205ENST00000427193 PKN3Q6P5Z2 889 aa7.71□□□□□ -1.18
C9orf3-205ENST00000427193 MCF2L2Q86YR7 1114 aa7.71□□□□□ -1.18
C9orf3-205ENST00000427193 MBD6Q96DN6 1003 aa7.71□□□□□ -1.18
C9orf3-205ENST00000427193 IER2Q9BTL4 223 aa7.71□□□□□ -1.18
C9orf3-205ENST00000427193 SLC6A20Q9NP91 592 aa7.71□□□□□ -1.18
C9orf3-205ENST00000427193 FTSJ1Q9UET6 329 aa7.71□□□□□ -1.18
C9orf3-205ENST00000427193 CROTQ9UKG9 612 aa7.71□□□□□ -1.18
C9orf3-205ENST00000427193 TMEM131LA2VDJ0 1609 aa7.7□□□□□ -1.18
C9orf3-205ENST00000427193 TNFRSF1AP19438 455 aa7.7□□□□□ -1.18
C9orf3-205ENST00000427193 ZEB1P37275 1124 aaPredicted RBP7.7□□□□□ -1.18
C9orf3-205ENST00000427193 ZCCHC14Q8WYQ9 949 aaKnown RBP7.7□□□□□ -1.18
C9orf3-205ENST00000427193 SGSM3Q96HU1 749 aa7.7□□□□□ -1.18
C9orf3-205ENST00000427193 ADAMTS13Q76LX8 1427 aa7.69□□□□□ -1.18
C9orf3-205ENST00000427193 DLX3O60479 287 aa7.69□□□□□ -1.18
C9orf3-205ENST00000427193 HSP90AA2PQ14568 343 aaPredicted RBP7.69□□□□□ -1.18
C9orf3-205ENST00000427193 LIMS2Q7Z4I7 341 aa7.69□□□□□ -1.18
C9orf3-205ENST00000427193 KLHL36Q8N4N3 616 aa7.69□□□□□ -1.18
C9orf3-205ENST00000427193 DVL3Q92997 716 aaPredicted RBP7.69□□□□□ -1.18
C9orf3-205ENST00000427193 PHF20Q9BVI0 1012 aa7.69□□□□□ -1.18
C9orf3-205ENST00000427193 WASF3Q9UPY6 502 aa7.69□□□□□ -1.18
C9orf3-205ENST00000427193 RPGRIP1LQ68CZ1 1315 aa7.69□□□□□ -1.18
C9orf3-205ENST00000427193 MYOM2P54296 1465 aa7.68□□□□□ -1.18
C9orf3-205ENST00000427193 MATN3O15232 486 aa7.68□□□□□ -1.18
C9orf3-205ENST00000427193 R3HDM1Q15032 1099 aaKnown RBP7.68□□□□□ -1.18
C9orf3-205ENST00000427193 DDR2Q16832 855 aa7.68□□□□□ -1.18
C9orf3-205ENST00000427193 TMC5Q6UXY8 1006 aa7.68□□□□□ -1.18
C9orf3-205ENST00000427193 USP53Q70EK8 1073 aa7.68□□□□□ -1.18
C9orf3-205ENST00000427193 CELF2-AS1Q8N7Q2 184 aa7.68□□□□□ -1.18
C9orf3-205ENST00000427193 PIP4K2CQ8TBX8 421 aa7.68□□□□□ -1.18
C9orf3-205ENST00000427193 HNRNPLLQ8WVV9 542 aaKnown RBP7.68□□□□□ -1.18
C9orf3-205ENST00000427193 JAM3Q9BX67 310 aa7.68□□□□□ -1.18
C9orf3-205ENST00000427193 PPP4R1LQ9P1A2 415 aa7.68□□□□□ -1.18
C9orf3-205ENST00000427193 NUB1Q9Y5A7 615 aa7.68□□□□□ -1.18
C9orf3-205ENST00000427193 UTRNP46939 3433 aa7.68□□□□□ -1.18
C9orf3-205ENST00000427193 GPRASP1Q5JY77 1395 aa7.68□□□□□ -1.18
C9orf3-205ENST00000427193 PRAG1Q86YV5 1406 aa7.68□□□□□ -1.18
C9orf3-205ENST00000427193 NEXMIFQ5QGS0 1516 aa7.68□□□□□ -1.18
C9orf3-205ENST00000427193 IQCA1LA6NCM1 817 aa7.67□□□□□ -1.18
C9orf3-205ENST00000427193 MSCO60682 206 aa7.67□□□□□ -1.18
C9orf3-205ENST00000427193 NBPF8Q3BBV2 869 aa7.67□□□□□ -1.18
C9orf3-205ENST00000427193 TRMT10BQ6PF06 316 aaKnown RBP7.67□□□□□ -1.18
C9orf3-205ENST00000427193 OTOP3Q7RTS5 596 aa7.67□□□□□ -1.18
C9orf3-205ENST00000427193 KBTBD2Q8IY47 623 aa7.67□□□□□ -1.18
C9orf3-205ENST00000427193 DCAF4Q8WV16 495 aa7.67□□□□□ -1.18
C9orf3-205ENST00000427193 ZFYVE21Q9BQ24 234 aa7.67□□□□□ -1.18
C9orf3-205ENST00000427193 AARSD1Q9BTE6 412 aaKnown RBP7.67□□□□□ -1.18
C9orf3-205ENST00000427193 BARX1Q9HBU1 254 aaPredicted RBP7.67□□□□□ -1.18
C9orf3-205ENST00000427193 DLL4Q9NR61 685 aa7.67□□□□□ -1.18
C9orf3-205ENST00000427193 ST7Q9NRC1 585 aa7.67□□□□□ -1.18
C9orf3-205ENST00000427193 PTPRUQ92729 1446 aa7.67□□□□□ -1.18
C9orf3-205ENST00000427193 RIMS2Q9UQ26 1411 aa7.67□□□□□ -1.18
C9orf3-205ENST00000427193 LAMC1P11047 1609 aa7.67□□□□□ -1.18
C9orf3-205ENST00000427193 NPEPPSL1A6NEC2 478 aa7.66□□□□□ -1.18
C9orf3-205ENST00000427193 SLC27A2O14975 620 aa7.66□□□□□ -1.18
C9orf3-205ENST00000427193 DNAJA1P31689 397 aaKnown RBP7.66□□□□□ -1.18
C9orf3-205ENST00000427193 EPHB4P54760 987 aa7.66□□□□□ -1.18
C9orf3-205ENST00000427193 C1QTNF8P60827 252 aa7.66□□□□□ -1.18
C9orf3-205ENST00000427193 PPP2CBP62714 309 aa7.66□□□□□ -1.18
C9orf3-205ENST00000427193 PPP2CAP67775 309 aa7.66□□□□□ -1.18
C9orf3-205ENST00000427193 ZXDAP98168 799 aa7.66□□□□□ -1.18
C9orf3-205ENST00000427193 NFATC3Q12968 1075 aa7.66□□□□□ -1.18
C9orf3-205ENST00000427193 KIZQ2M2Z5 673 aa7.66□□□□□ -1.18
C9orf3-205ENST00000427193 VASNQ6EMK4 673 aa7.66□□□□□ -1.18
C9orf3-205ENST00000427193 ARHGEF18Q6ZSZ5 1173 aa7.66□□□□□ -1.18
C9orf3-205ENST00000427193 ANKS3Q6ZW76 656 aa7.66□□□□□ -1.18
C9orf3-205ENST00000427193 PROSER1Q86XN7 944 aa7.66□□□□□ -1.18
C9orf3-205ENST00000427193 DTX3Q8N9I9 347 aa7.66□□□□□ -1.18
C9orf3-205ENST00000427193 SLC43A3Q8NBI5 491 aa7.66□□□□□ -1.18
C9orf3-205ENST00000427193 PDGFDQ9GZP0 370 aaPredicted RBP7.66□□□□□ -1.18
C9orf3-205ENST00000427193 PPARGC1AQ9UBK2 798 aaKnown RBP7.66□□□□□ -1.18
C9orf3-205ENST00000427193 ST6GALNAC2Q9UJ37 374 aa7.66□□□□□ -1.18
C9orf3-205ENST00000427193 TONSLQ96HA7 1378 aa7.66□□□□□ -1.18
C9orf3-205ENST00000427193 PIK3C2GO75747 1445 aa7.66□□□□□ -1.18
C9orf3-205ENST00000427193 RALGAPBQ86X10 1494 aa7.66□□□□□ -1.18
C9orf3-205ENST00000427193 CHGBP05060 677 aa7.65□□□□□ -1.18
C9orf3-205ENST00000427193 FGFR1P11362 822 aa7.65□□□□□ -1.18
C9orf3-205ENST00000427193 GRK2P25098 689 aa7.65□□□□□ -1.18
C9orf3-205ENST00000427193 GRK3P35626 688 aa7.65□□□□□ -1.18
C9orf3-205ENST00000427193 LBX2Q6XYB7 198 aa7.65□□□□□ -1.18
C9orf3-205ENST00000427193 UHMK1Q8TAS1 419 aaKnown RBP7.65□□□□□ -1.18
C9orf3-205ENST00000427193 IGDCC4Q8TDY8 1250 aa7.65□□□□□ -1.18
C9orf3-205ENST00000427193 CLEC4DQ8WXI8 215 aa7.65□□□□□ -1.18
C9orf3-205ENST00000427193 GMLQ99445 158 aa7.65□□□□□ -1.18
C9orf3-205ENST00000427193 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.65□□□□□ -1.18
C9orf3-205ENST00000427193 IFT172Q9UG01 1749 aa7.65□□□□□ -1.18
C9orf3-205ENST00000427193 COL22A1Q8NFW1 1626 aaPredicted RBP7.64□□□□□ -1.19
C9orf3-205ENST00000427193 ADGRF5Q8IZF2 1346 aa7.64□□□□□ -1.19
C9orf3-205ENST00000427193 COL6A1P12109 1028 aa7.64□□□□□ -1.19
C9orf3-205ENST00000427193 SPIRE1Q08AE8 756 aa7.64□□□□□ -1.19
C9orf3-205ENST00000427193 CIR1Q86X95 450 aaPredicted RBP7.64□□□□□ -1.19
C9orf3-205ENST00000427193 UNC5CLQ8IV45 518 aa7.64□□□□□ -1.19
C9orf3-205ENST00000427193 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.64□□□□□ -1.19
C9orf3-205ENST00000427193 ST13P5Q8NFI4 369 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms