RNA–Protein interactions for RNA: ENST00000427174.5

RPUSD3-205, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-205ENST00000427174 MED24O75448 989 aa24.1■■□□□ 1.45
RPUSD3-205ENST00000427174 CHRDL2Q6WN34 429 aa24.1■■□□□ 1.45
RPUSD3-205ENST00000427174 DTHD1Q6ZMT9 781 aa24.1■■□□□ 1.45
RPUSD3-205ENST00000427174 C16orf59Q7L2K0 433 aa24.1■■□□□ 1.45
RPUSD3-205ENST00000427174 CATSPER3Q86XQ3 398 aa24.1■■□□□ 1.45
RPUSD3-205ENST00000427174 TUFT1Q9NNX1 390 aa24.1■■□□□ 1.45
RPUSD3-205ENST00000427174 MORC2Q9Y6X9 1032 aaPredicted RBP24.1■■□□□ 1.45
RPUSD3-205ENST00000427174 BRD1O95696 1058 aa24.09■■□□□ 1.45
RPUSD3-205ENST00000427174 RPA1P27694 616 aa24.09■■□□□ 1.45
RPUSD3-205ENST00000427174 THPOP40225 353 aa24.09■■□□□ 1.45
RPUSD3-205ENST00000427174 MBTPS1Q14703 1052 aa24.09■■□□□ 1.45
RPUSD3-205ENST00000427174 FAM26DQ5JW98 314 aa24.09■■□□□ 1.45
RPUSD3-205ENST00000427174 LRRC8DQ7L1W4 858 aa24.09■■□□□ 1.45
RPUSD3-205ENST00000427174 TPH2Q8IWU9 490 aa24.09■■□□□ 1.45
RPUSD3-205ENST00000427174 RETREG2Q8NC44 543 aa24.09■■□□□ 1.45
RPUSD3-205ENST00000427174 USP28Q96RU2 1077 aa24.09■■□□□ 1.45
RPUSD3-205ENST00000427174 LRWD1Q9UFC0 647 aa24.09■■□□□ 1.45
RPUSD3-205ENST00000427174 SEPT9Q9UHD8 586 aaPredicted RBP24.09■■□□□ 1.45
RPUSD3-205ENST00000427174 IGKV6-21A0A0C4DH24 114 aa24.08■■□□□ 1.45
RPUSD3-205ENST00000427174 DDX11L8A8MPP1 907 aa24.08■■□□□ 1.45
RPUSD3-205ENST00000427174 ZBTB39O15060 712 aa24.08■■□□□ 1.45
RPUSD3-205ENST00000427174 YWHABP31946 246 aaKnown RBP24.08■■□□□ 1.45
RPUSD3-205ENST00000427174 DDIT3P35638 169 aa24.08■■□□□ 1.45
RPUSD3-205ENST00000427174 PPIGQ13427 754 aaKnown RBP eCLIP24.08■■□□□ 1.45
RPUSD3-205ENST00000427174 DNAJB3Q8WWF6 145 aa24.08■■□□□ 1.45
RPUSD3-205ENST00000427174 MMTAG2Q9BU76 263 aaKnown RBP24.08■■□□□ 1.45
RPUSD3-205ENST00000427174 IL23AQ9NPF7 189 aa24.08■■□□□ 1.45
RPUSD3-205ENST00000427174 MICAL3Q7RTP6 2002 aa24.08■■□□□ 1.44
RPUSD3-205ENST00000427174 MAGEB2O15479 319 aa24.07■■□□□ 1.44
RPUSD3-205ENST00000427174 RPLP2P05387 115 aaKnown RBP24.07■■□□□ 1.44
RPUSD3-205ENST00000427174 MUTP22033 750 aa24.07■■□□□ 1.44
RPUSD3-205ENST00000427174 RFC2P35250 354 aa24.07■■□□□ 1.44
RPUSD3-205ENST00000427174 NASPP49321 788 aaPredicted RBP24.07■■□□□ 1.44
RPUSD3-205ENST00000427174 MGAT3Q09327 533 aa24.07■■□□□ 1.44
RPUSD3-205ENST00000427174 FOXD4L5Q5VV16 416 aaPredicted RBP24.07■■□□□ 1.44
RPUSD3-205ENST00000427174 PLA2G4FQ68DD2 849 aa24.07■■□□□ 1.44
RPUSD3-205ENST00000427174 KIAA0319LQ8IZA0 1049 aa24.07■■□□□ 1.44
RPUSD3-205ENST00000427174 ZNF579Q8NAF0 562 aaKnown RBP24.07■■□□□ 1.44
RPUSD3-205ENST00000427174 ERMNQ8TAM6 284 aa24.07■■□□□ 1.44
RPUSD3-205ENST00000427174 FOXD4L4Q8WXT5 416 aaPredicted RBP24.07■■□□□ 1.44
RPUSD3-205ENST00000427174 SH2D3AQ9BRG2 576 aa24.07■■□□□ 1.44
RPUSD3-205ENST00000427174 RAB34Q9BZG1 259 aa24.07■■□□□ 1.44
RPUSD3-205ENST00000427174 CYP26B1Q9NR63 512 aa24.07■■□□□ 1.44
RPUSD3-205ENST00000427174 COLQQ9Y215 455 aaPredicted RBP24.07■■□□□ 1.44
RPUSD3-205ENST00000427174 PTPRSQ13332 1948 aa24.06■■□□□ 1.44
RPUSD3-205ENST00000427174 VWA3AA6NCI4 1184 aa24.06■■□□□ 1.44
RPUSD3-205ENST00000427174 PP2D1A8MPX8 630 aa24.06■■□□□ 1.44
RPUSD3-205ENST00000427174 PARNO95453 639 aaKnown RBP24.06■■□□□ 1.44
RPUSD3-205ENST00000427174 CXCL10P02778 98 aa24.06■■□□□ 1.44
RPUSD3-205ENST00000427174 NPEPPSP55786 919 aa24.06■■□□□ 1.44
RPUSD3-205ENST00000427174 ECM1Q16610 540 aa24.06■■□□□ 1.44
RPUSD3-205ENST00000427174 MTERF2Q49AM1 385 aa24.06■■□□□ 1.44
RPUSD3-205ENST00000427174 UBE2OQ9C0C9 1292 aaKnown RBP24.06■■□□□ 1.44
RPUSD3-205ENST00000427174 PPME1Q9Y570 386 aa24.06■■□□□ 1.44
RPUSD3-205ENST00000427174 RSPH10B2B2RC85 870 aa24.05■■□□□ 1.44
RPUSD3-205ENST00000427174 NBNO60934 754 aa24.05■■□□□ 1.44
RPUSD3-205ENST00000427174 MAFO75444 373 aaPredicted RBP24.05■■□□□ 1.44
RPUSD3-205ENST00000427174 CHRNA1P02708 482 aa24.05■■□□□ 1.44
RPUSD3-205ENST00000427174 RSPH10BP0C881 870 aa24.05■■□□□ 1.44
RPUSD3-205ENST00000427174 XRCC6P12956 609 aaKnown RBP eCLIP24.05■■□□□ 1.44
RPUSD3-205ENST00000427174 GRIN1Q05586 938 aa24.05■■□□□ 1.44
RPUSD3-205ENST00000427174 SLC39A14Q15043 492 aa24.05■■□□□ 1.44
RPUSD3-205ENST00000427174 HAUS3Q68CZ6 603 aa24.05■■□□□ 1.44
RPUSD3-205ENST00000427174 NME8Q8N427 588 aa24.05■■□□□ 1.44
RPUSD3-205ENST00000427174 OSBPL7Q9BZF2 842 aa24.05■■□□□ 1.44
RPUSD3-205ENST00000427174 FAM49AQ9H0Q0 323 aaPredicted RBP24.05■■□□□ 1.44
RPUSD3-205ENST00000427174 ANKEF1Q9NU02 776 aa24.05■■□□□ 1.44
RPUSD3-205ENST00000427174 STK24Q9Y6E0 443 aa24.05■■□□□ 1.44
RPUSD3-205ENST00000427174 CTSHP09668 335 aa24.04■■□□□ 1.44
RPUSD3-205ENST00000427174 CDC25AP30304 524 aa24.04■■□□□ 1.44
RPUSD3-205ENST00000427174 TBC1D8BQ0IIM8 1120 aa24.04■■□□□ 1.44
RPUSD3-205ENST00000427174 MKRN4PQ13434 485 aaPredicted RBP24.04■■□□□ 1.44
RPUSD3-205ENST00000427174 TMEM240Q5SV17 173 aa24.04■■□□□ 1.44
RPUSD3-205ENST00000427174 POTEGQ6S5H5 508 aa24.04■■□□□ 1.44
RPUSD3-205ENST00000427174 OTUD6AQ7L8S5 288 aa24.04■■□□□ 1.44
RPUSD3-205ENST00000427174 RSPH3Q86UC2 560 aa24.04■■□□□ 1.44
RPUSD3-205ENST00000427174 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.04■■□□□ 1.448e-7■■■■■ 32.7
RPUSD3-205ENST00000427174 DHX33Q9H6R0 707 aaKnown RBP24.04■■□□□ 1.44
RPUSD3-205ENST00000427174 FBXO2Q9UK22 296 aaPredicted RBP24.04■■□□□ 1.44
RPUSD3-205ENST00000427174 KDM3AQ9Y4C1 1321 aa24.04■■□□□ 1.44
RPUSD3-205ENST00000427174 RBAK-RBAKDNI3L0D1 243 aa24.03■■□□□ 1.44
RPUSD3-205ENST00000427174 PFKMP08237 780 aa24.03■■□□□ 1.44
RPUSD3-205ENST00000427174 ACRP10323 421 aa24.03■■□□□ 1.44
RPUSD3-205ENST00000427174 CCT6AP40227 531 aaKnown RBP24.03■■□□□ 1.44
RPUSD3-205ENST00000427174 RARRES1P49788 294 aa24.03■■□□□ 1.44
RPUSD3-205ENST00000427174 MRPS6P82932 125 aaKnown RBP24.03■■□□□ 1.44
RPUSD3-205ENST00000427174 CEBPZQ03701 1054 aaKnown RBP24.03■■□□□ 1.44
RPUSD3-205ENST00000427174 C9orf50Q5SZB4 431 aa24.03■■□□□ 1.44
RPUSD3-205ENST00000427174 HYIQ5T013 277 aa24.03■■□□□ 1.44
RPUSD3-205ENST00000427174 EFCAB12Q6NXP0 572 aa24.03■■□□□ 1.44
RPUSD3-205ENST00000427174 RPUSD2Q8IZ73 545 aaKnown RBP24.03■■□□□ 1.44
RPUSD3-205ENST00000427174 LRRC71Q8N4P6 559 aa24.03■■□□□ 1.44
RPUSD3-205ENST00000427174 LINC00301Q8NCQ3 95 aa24.03■■□□□ 1.44
RPUSD3-205ENST00000427174 SNX29Q8TEQ0 813 aa24.03■■□□□ 1.44
RPUSD3-205ENST00000427174 PIGOQ8TEQ8 1089 aa24.03■■□□□ 1.44
RPUSD3-205ENST00000427174 CEP170P1Q96L14 293 aa24.03■■□□□ 1.44
RPUSD3-205ENST00000427174 AK8Q96MA6 479 aa24.03■■□□□ 1.44
RPUSD3-205ENST00000427174 ZNF396Q96N95 335 aaPredicted RBP24.03■■□□□ 1.44
RPUSD3-205ENST00000427174 DBR1Q9UK59 544 aaKnown RBP24.03■■□□□ 1.44
RPUSD3-205ENST00000427174 SRPRBQ9Y5M8 271 aaKnown RBP24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms