RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 MRPL4Q9BYD3 311 aaKnown RBP15.02□□□□□ -0.01
RPL28-202ENST00000426763 SLC12A2P55011 1212 aa15.02□□□□□ -0.01
RPL28-202ENST00000426763 ELF2Q15723 593 aa15.02□□□□□ -0.01
RPL28-202ENST00000426763 KNOP1Q1ED39 458 aaKnown RBP15.02□□□□□ -0.01
RPL28-202ENST00000426763 KAZNQ674X7 775 aa15.02□□□□□ -0.01
RPL28-202ENST00000426763 CHST13Q8NET6 341 aa15.02□□□□□ -0.01
RPL28-202ENST00000426763 PLCB1Q9NQ66 1216 aa15.02□□□□□ -0.01
RPL28-202ENST00000426763 SCAF8Q9UPN6 1271 aaKnown RBP15.02□□□□□ -0.01
RPL28-202ENST00000426763 SPDYE2BA6NHP3 402 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 EYA4O95677 639 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 SPDYE6P0CI01 402 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 HPDP32754 393 aaPredicted RBP15.01□□□□□ -0.01
RPL28-202ENST00000426763 OR6B2Q6IFH4 312 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 P3H4Q92791 437 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 RUNDC3BQ96NL0 473 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 UBR1Q8IWV7 1749 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 SREBF2Q12772 1141 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 RFX6Q8HWS3 928 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 PALM2Q8IXS6 379 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 BBS5Q8N3I7 341 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 GPRC5AQ8NFJ5 357 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 OR6B3Q8NGW1 331 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 PPM1EQ8WY54 764 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 GOLPH3LQ9H4A5 285 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 ZNF148Q9UQR1 794 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 PP2D1A8MPX8 630 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 H7C0C1 242 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 GIPC1O14908 333 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 TBX3O15119 743 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 ATP5OP48047 213 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 DENND2CQ68D51 928 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 BEST2Q8NFU1 509 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 DDX41Q9UJV9 622 aaKnown RBP15.01□□□□□ -0.01
RPL28-202ENST00000426763 NR3C2P08235 984 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 IL1R1P14778 569 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 SETDB1Q15047 1291 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 BBOF1Q8ND07 529 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 ZBTB9Q96C00 473 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 EIF3CLB5ME19 914 aaKnown RBP15.01□□□□□ -0.01
RPL28-202ENST00000426763 MAP7D1Q3KQU3 841 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 THEM5Q8N1Q8 247 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 EIF3CQ99613 913 aaKnown RBP15.01□□□□□ -0.01
RPL28-202ENST00000426763 FAM213AQ9BRX8 229 aa15.01□□□□□ -0.01
RPL28-202ENST00000426763 C3P01024 1663 aa15□□□□□ -0.01
RPL28-202ENST00000426763 GGPS1O95749 300 aa15□□□□□ -0.01
RPL28-202ENST00000426763 GPC3P51654 580 aa15□□□□□ -0.01
RPL28-202ENST00000426763 LMNB2Q03252 620 aa15□□□□□ -0.01
RPL28-202ENST00000426763 KRT12Q99456 494 aa15□□□□□ -0.01
RPL28-202ENST00000426763 TIPINQ9BVW5 301 aa15□□□□□ -0.01
RPL28-202ENST00000426763 JMJD4Q9H9V9 463 aa15□□□□□ -0.01
RPL28-202ENST00000426763 INPP5FQ9Y2H2 1132 aa15□□□□□ -0.01
RPL28-202ENST00000426763 STXBP3O00186 592 aa15□□□□□ -0.01
RPL28-202ENST00000426763 KRT15P19012 456 aa15□□□□□ -0.01
RPL28-202ENST00000426763 CAP2P40123 477 aa15□□□□□ -0.01
RPL28-202ENST00000426763 URGCPQ8TCY9 931 aa15□□□□□ -0.01
RPL28-202ENST00000426763 U2AF2P26368 475 aaKnown RBP eCLIP15□□□□□ -0.01
RPL28-202ENST00000426763 CASP1P29466 404 aa15□□□□□ -0.01
RPL28-202ENST00000426763 YWHABP31946 246 aaKnown RBP15□□□□□ -0.01
RPL28-202ENST00000426763 MAN1A1P33908 653 aa15□□□□□ -0.01
RPL28-202ENST00000426763 PHBP35232 272 aa15□□□□□ -0.01
RPL28-202ENST00000426763 EIF4A3P38919 411 aaKnown RBP15□□□□□ -0.01
RPL28-202ENST00000426763 NAALADL2Q58DX5 795 aa15□□□□□ -0.01
RPL28-202ENST00000426763 AFAP1L2Q8N4X5 818 aa15□□□□□ -0.01
RPL28-202ENST00000426763 TSC1Q92574 1164 aa15□□□□□ -0.01
RPL28-202ENST00000426763 PRCPP42785 496 aa14.99□□□□□ -0.01
RPL28-202ENST00000426763 CYFIP1Q7L576 1253 aa14.99□□□□□ -0.01
RPL28-202ENST00000426763 FBXO41Q8TF61 875 aa14.99□□□□□ -0.01
RPL28-202ENST00000426763 VPS33BQ9H267 617 aa14.99□□□□□ -0.01
RPL28-202ENST00000426763 GH1P01241 217 aa14.99□□□□□ -0.01
RPL28-202ENST00000426763 CXCL9Q07325 125 aa14.99□□□□□ -0.01
RPL28-202ENST00000426763 GOLGA8FQ08AF8 430 aa14.99□□□□□ -0.01
RPL28-202ENST00000426763 GOLGA8DPQ0D2H9 430 aa14.99□□□□□ -0.01
RPL28-202ENST00000426763 BIRC2Q13490 618 aa14.99□□□□□ -0.01
RPL28-202ENST00000426763 XKR3Q5GH77 459 aa14.99□□□□□ -0.01
RPL28-202ENST00000426763 ADAT2Q7Z6V5 191 aaKnown RBP14.99□□□□□ -0.01
RPL28-202ENST00000426763 NHEJ1Q9H9Q4 299 aaPredicted RBP14.99□□□□□ -0.01
RPL28-202ENST00000426763 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.99□□□□□ -0.01
RPL28-202ENST00000426763 NRBP1Q9UHY1 535 aa14.99□□□□□ -0.01
RPL28-202ENST00000426763 PPP2R3BQ9Y5P8 575 aa14.99□□□□□ -0.01
RPL28-202ENST00000426763 ATF2P15336 505 aa14.99□□□□□ -0.01
RPL28-202ENST00000426763 EPHX2P34913 555 aa14.99□□□□□ -0.01
RPL28-202ENST00000426763 VPS41P49754 854 aa14.99□□□□□ -0.01
RPL28-202ENST00000426763 GTF2A2P52657 109 aa14.99□□□□□ -0.01
RPL28-202ENST00000426763 EFNA5P52803 228 aa14.99□□□□□ -0.01
RPL28-202ENST00000426763 PRPSAP1Q14558 356 aa14.99□□□□□ -0.01
RPL28-202ENST00000426763 CTAGE3PQ8IX95 158 aa14.99□□□□□ -0.01
RPL28-202ENST00000426763 RNF139Q8WU17 664 aa14.99□□□□□ -0.01
RPL28-202ENST00000426763 SLC26A4O43511 780 aa14.99□□□□□ -0.01
RPL28-202ENST00000426763 VIMP08670 466 aaKnown RBP14.99□□□□□ -0.01
RPL28-202ENST00000426763 ARL4AP40617 200 aa14.99□□□□□ -0.01
RPL28-202ENST00000426763 ZNF699Q32M78 642 aa14.99□□□□□ -0.01
RPL28-202ENST00000426763 FYB2Q5VWT5 728 aa14.99□□□□□ -0.01
RPL28-202ENST00000426763 GCNAQ96QF7 691 aa14.99□□□□□ -0.01
RPL28-202ENST00000426763 RTFDC1Q9BY42 306 aaPredicted RBP14.99□□□□□ -0.01
RPL28-202ENST00000426763 PASKQ96RG2 1323 aa14.99□□□□□ -0.01
RPL28-202ENST00000426763 HIP1RO75146 1068 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 PTPN21Q16825 1174 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 CCDC121Q6ZUS5 278 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 TXNRD3Q86VQ6 643 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 GUF1Q8N442 669 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms