RNA–Protein interactions for RNA: ENST00000424766.5

PMS1-211, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 3

Gene PMS1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-211ENST00000424766 SH3RF1Q7Z6J0 888 aa23.04■■□□□ 1.28
PMS1-211ENST00000424766 SCAND2PQ9GZW5 306 aaPredicted RBP23.04■■□□□ 1.28
PMS1-211ENST00000424766 CSRNP2Q9H175 543 aa23.04■■□□□ 1.28
PMS1-211ENST00000424766 PCDHA2Q9Y5H9 948 aa23.04■■□□□ 1.28
PMS1-211ENST00000424766 ARID2Q68CP9 1835 aa23.03■■□□□ 1.28
PMS1-211ENST00000424766 TRIM43BA6NCK2 446 aa23.03■■□□□ 1.28
PMS1-211ENST00000424766 ZBTB39O15060 712 aa23.03■■□□□ 1.28
PMS1-211ENST00000424766 BFSP2Q13515 415 aa23.03■■□□□ 1.28
PMS1-211ENST00000424766 TAF2Q6P1X5 1199 aa23.03■■□□□ 1.28
PMS1-211ENST00000424766 CABP7Q86V35 215 aa23.03■■□□□ 1.28
PMS1-211ENST00000424766 EXOC8Q8IYI6 725 aa23.03■■□□□ 1.28
PMS1-211ENST00000424766 CCDC155Q8N6L0 562 aa23.03■■□□□ 1.28
PMS1-211ENST00000424766 ZNF579Q8NAF0 562 aaKnown RBP23.03■■□□□ 1.28
PMS1-211ENST00000424766 CAGE1Q8TC20 777 aa23.03■■□□□ 1.28
PMS1-211ENST00000424766 TRIM43Q96BQ3 446 aaPredicted RBP23.03■■□□□ 1.28
PMS1-211ENST00000424766 CLIC6Q96NY7 704 aa23.03■■□□□ 1.28
PMS1-211ENST00000424766 CEP89Q96ST8 783 aa23.03■■□□□ 1.28
PMS1-211ENST00000424766 CCSER1Q9C0I3 900 aa23.03■■□□□ 1.28
PMS1-211ENST00000424766 NT5C3AQ9H0P0 336 aa23.03■■□□□ 1.28
PMS1-211ENST00000424766 PRDM5Q9NQX1 630 aaPredicted RBP23.03■■□□□ 1.28
PMS1-211ENST00000424766 CYP26B1Q9NR63 512 aa23.03■■□□□ 1.28
PMS1-211ENST00000424766 DBR1Q9UK59 544 aaKnown RBP23.03■■□□□ 1.28
PMS1-211ENST00000424766 KDM3AQ9Y4C1 1321 aa23.03■■□□□ 1.28
PMS1-211ENST00000424766 MKI67P46013 3256 aaKnown RBP23.02■■□□□ 1.28
PMS1-211ENST00000424766 SMIM35A0A1B0GVV1 85 aa23.02■■□□□ 1.28
PMS1-211ENST00000424766 CUTAO60888 179 aa23.02■■□□□ 1.28
PMS1-211ENST00000424766 RPLP2P05387 115 aaKnown RBP23.02■■□□□ 1.28
PMS1-211ENST00000424766 NCLP19338 710 aaKnown RBP23.02■■□□□ 1.28
PMS1-211ENST00000424766 RBL2Q08999 1139 aa23.02■■□□□ 1.28
PMS1-211ENST00000424766 ECM1Q16610 540 aa23.02■■□□□ 1.28
PMS1-211ENST00000424766 MTERF2Q49AM1 385 aa23.02■■□□□ 1.28
PMS1-211ENST00000424766 XKR9Q5GH70 373 aa23.02■■□□□ 1.28
PMS1-211ENST00000424766 RPAINQ86UA6 219 aa23.02■■□□□ 1.28
PMS1-211ENST00000424766 PIGOQ8TEQ8 1089 aa23.02■■□□□ 1.28
PMS1-211ENST00000424766 LEO1Q8WVC0 666 aaPredicted RBP23.02■■□□□ 1.28
PMS1-211ENST00000424766 DHX38Q92620 1227 aaKnown RBP23.02■■□□□ 1.28
PMS1-211ENST00000424766 CEP170P1Q96L14 293 aa23.02■■□□□ 1.28
PMS1-211ENST00000424766 NOC4LQ9BVI4 516 aaKnown RBP23.02■■□□□ 1.28
PMS1-211ENST00000424766 HIPK3Q9H422 1215 aa23.02■■□□□ 1.28
PMS1-211ENST00000424766 KIAA1024Q9UPX6 916 aa23.02■■□□□ 1.28
PMS1-211ENST00000424766 TMEM150BA6NC51 233 aa23.01■■□□□ 1.27
PMS1-211ENST00000424766 PITPNM1O00562 1244 aa23.01■■□□□ 1.27
PMS1-211ENST00000424766 C22orf31O95567 290 aa23.01■■□□□ 1.27
PMS1-211ENST00000424766 TIMP1P01033 207 aa23.01■■□□□ 1.27
PMS1-211ENST00000424766 RAG1P15918 1043 aa23.01■■□□□ 1.27
PMS1-211ENST00000424766 NPEPPSP55786 919 aa23.01■■□□□ 1.27
PMS1-211ENST00000424766 TBC1D8BQ0IIM8 1120 aa23.01■■□□□ 1.27
PMS1-211ENST00000424766 TRIM71Q2Q1W2 868 aaKnown RBP23.01■■□□□ 1.27
PMS1-211ENST00000424766 PLA2G4FQ68DD2 849 aa23.01■■□□□ 1.27
PMS1-211ENST00000424766 POTEGQ6S5H5 508 aa23.01■■□□□ 1.27
PMS1-211ENST00000424766 CALML4Q96GE6 196 aa23.01■■□□□ 1.27
PMS1-211ENST00000424766 SPATA32Q96LK8 384 aa23.01■■□□□ 1.27
PMS1-211ENST00000424766 JPH2Q9BR39 696 aaPredicted RBP23.01■■□□□ 1.27
PMS1-211ENST00000424766 DDX19AQ9NUU7 478 aaKnown RBP23.01■■□□□ 1.27
PMS1-211ENST00000424766 DNM3Q9UQ16 869 aa23.01■■□□□ 1.27
PMS1-211ENST00000424766 CAND2O75155 1236 aa23■■□□□ 1.27
PMS1-211ENST00000424766 MAFO75444 373 aaPredicted RBP23■■□□□ 1.27
PMS1-211ENST00000424766 ME1P48163 572 aa23■■□□□ 1.27
PMS1-211ENST00000424766 GRB10Q13322 594 aa23■■□□□ 1.27
PMS1-211ENST00000424766 RUFY4Q6ZNE9 571 aa23■■□□□ 1.27
PMS1-211ENST00000424766 RSPH3Q86UC2 560 aa23■■□□□ 1.27
PMS1-211ENST00000424766 NME8Q8N427 588 aa23■■□□□ 1.27
PMS1-211ENST00000424766 RETREG2Q8NC44 543 aa23■■□□□ 1.27
PMS1-211ENST00000424766 EPSTI1Q96J88 318 aa23■■□□□ 1.27
PMS1-211ENST00000424766 CDK5RAP3Q96JB5 506 aa23■■□□□ 1.27
PMS1-211ENST00000424766 CHAMP1Q96JM3 812 aa23■■□□□ 1.27
PMS1-211ENST00000424766 PCDHA7Q9UN72 937 aa23■■□□□ 1.27
PMS1-211ENST00000424766 A0A087WWV3 80 aa22.99■■□□□ 1.27
PMS1-211ENST00000424766 IGKV6-21A0A0C4DH24 114 aa22.99■■□□□ 1.27
PMS1-211ENST00000424766 RFC5P40937 340 aa22.99■■□□□ 1.27
PMS1-211ENST00000424766 RARRES1P49788 294 aa22.99■■□□□ 1.27
PMS1-211ENST00000424766 SPECC1Q5M775 1068 aa22.99■■□□□ 1.27
PMS1-211ENST00000424766 AXDND1Q5T1B0 1012 aaPredicted RBP22.99■■□□□ 1.27
PMS1-211ENST00000424766 EFCAB12Q6NXP0 572 aa22.99■■□□□ 1.27
PMS1-211ENST00000424766 SYMPKQ92797 1274 aaKnown RBP22.99■■□□□ 1.27
PMS1-211ENST00000424766 WNT8BQ93098 351 aa22.99■■□□□ 1.27
PMS1-211ENST00000424766 PNMA5Q96PV4 448 aa22.99■■□□□ 1.27
PMS1-211ENST00000424766 SH2D3AQ9BRG2 576 aa22.99■■□□□ 1.27
PMS1-211ENST00000424766 DHX33Q9H6R0 707 aaKnown RBP22.99■■□□□ 1.27
PMS1-211ENST00000424766 ZMYND8Q9ULU4 1186 aaPredicted RBP22.99■■□□□ 1.27
PMS1-211ENST00000424766 PDE4DIPQ5VU43 2346 aa22.98■■□□□ 1.27
PMS1-211ENST00000424766 CKBP12277 381 aa22.98■■□□□ 1.27
PMS1-211ENST00000424766 SYN1P17600 705 aa22.98■■□□□ 1.27
PMS1-211ENST00000424766 TMOD1P28289 359 aa22.98■■□□□ 1.27
PMS1-211ENST00000424766 TXLNAP40222 546 aa22.98■■□□□ 1.27
PMS1-211ENST00000424766 ZRSR1Q15695 479 aaKnown RBP22.98■■□□□ 1.27
PMS1-211ENST00000424766 TMEM119Q4V9L6 283 aa22.98■■□□□ 1.27
PMS1-211ENST00000424766 USP49Q70CQ1 688 aa22.98■■□□□ 1.27
PMS1-211ENST00000424766 KIAA0319LQ8IZA0 1049 aa22.98■■□□□ 1.27
PMS1-211ENST00000424766 LINC01465Q8N7H1 131 aa22.98■■□□□ 1.27
PMS1-211ENST00000424766 DNAJB3Q8WWF6 145 aa22.98■■□□□ 1.27
PMS1-211ENST00000424766 ZBTB10Q96DT7 871 aa22.98■■□□□ 1.27
PMS1-211ENST00000424766 CCDC43Q96MW1 224 aaKnown RBP22.98■■□□□ 1.27
PMS1-211ENST00000424766 PPP1R12CQ9BZL4 782 aa22.98■■□□□ 1.27
PMS1-211ENST00000424766 CCDC39Q9UFE4 941 aa22.98■■□□□ 1.27
PMS1-211ENST00000424766 LTBP2Q14767 1821 aa22.97■■□□□ 1.27
PMS1-211ENST00000424766 GAS2O43903 313 aaKnown RBP22.97■■□□□ 1.27
PMS1-211ENST00000424766 EYA4O95677 639 aa22.97■■□□□ 1.27
PMS1-211ENST00000424766 SELPP16109 830 aa22.97■■□□□ 1.27
PMS1-211ENST00000424766 ITGB8P26012 769 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms