RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 NOD1Q9Y239 953 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 ATP6V1DQ9Y5K8 247 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 SRPRBQ9Y5M8 271 aaKnown RBP10.39□□□□□ -0.75
PDGFC-202ENST00000422544 TRIM43BA6NCK2 446 aa10.38□□□□□ -0.75
PDGFC-202ENST00000422544 RRN3P2A6NIE6 340 aa10.38□□□□□ -0.75
PDGFC-202ENST00000422544 ZBTB42B2RXF5 422 aa10.38□□□□□ -0.75
PDGFC-202ENST00000422544 SPTLC2O15270 562 aa10.38□□□□□ -0.75
PDGFC-202ENST00000422544 DKC1O60832 514 aaKnown RBP eCLIP10.38□□□□□ -0.75
PDGFC-202ENST00000422544 YEATS4O95619 227 aa10.38□□□□□ -0.75
PDGFC-202ENST00000422544 CLTBP09497 229 aa10.38□□□□□ -0.75
PDGFC-202ENST00000422544 RPA1P27694 616 aa10.38□□□□□ -0.75
PDGFC-202ENST00000422544 HOXC8P31273 242 aa10.38□□□□□ -0.75
PDGFC-202ENST00000422544 YWHABP31946 246 aaKnown RBP10.38□□□□□ -0.75
PDGFC-202ENST00000422544 BMP8BP34820 402 aa10.38□□□□□ -0.75
PDGFC-202ENST00000422544 CCT6AP40227 531 aaKnown RBP10.38□□□□□ -0.75
PDGFC-202ENST00000422544 ADAM17P78536 824 aa10.38□□□□□ -0.75
PDGFC-202ENST00000422544 ZRSR1Q15695 479 aaKnown RBP10.38□□□□□ -0.75
PDGFC-202ENST00000422544 ECM1Q16610 540 aa10.38□□□□□ -0.75
PDGFC-202ENST00000422544 ZNF484Q5JVG2 852 aa10.38□□□□□ -0.75
PDGFC-202ENST00000422544 SPECC1Q5M775 1068 aa10.38□□□□□ -0.75
PDGFC-202ENST00000422544 MARCH8Q5T0T0 291 aa10.38□□□□□ -0.75
PDGFC-202ENST00000422544 KRT79Q5XKE5 535 aa10.38□□□□□ -0.75
PDGFC-202ENST00000422544 PLA2G4FQ68DD2 849 aa10.38□□□□□ -0.75
PDGFC-202ENST00000422544 ANO5Q75V66 913 aa10.38□□□□□ -0.75
PDGFC-202ENST00000422544 ZNF579Q8NAF0 562 aaKnown RBP10.38□□□□□ -0.75
PDGFC-202ENST00000422544 SNX29Q8TEQ0 813 aa10.38□□□□□ -0.75
PDGFC-202ENST00000422544 TRIM43Q96BQ3 446 aaPredicted RBP10.38□□□□□ -0.75
PDGFC-202ENST00000422544 MMTAG2Q9BU76 263 aaKnown RBP10.38□□□□□ -0.75
PDGFC-202ENST00000422544 NIFKQ9BYG3 293 aaKnown RBP10.38□□□□□ -0.75
PDGFC-202ENST00000422544 CSRNP2Q9H175 543 aa10.38□□□□□ -0.75
PDGFC-202ENST00000422544 TUFT1Q9NNX1 390 aa10.38□□□□□ -0.75
PDGFC-202ENST00000422544 PDLIM7Q9NR12 457 aa10.38□□□□□ -0.75
PDGFC-202ENST00000422544 SEPT9Q9UHD8 586 aaPredicted RBP10.38□□□□□ -0.75
PDGFC-202ENST00000422544 ZMYND8Q9ULU4 1186 aaPredicted RBP10.38□□□□□ -0.75
PDGFC-202ENST00000422544 STXBP5LQ9Y2K9 1186 aa10.38□□□□□ -0.75
PDGFC-202ENST00000422544 XIRP2A4UGR9 3374 aa10.38□□□□□ -0.75
PDGFC-202ENST00000422544 SCN10AQ9Y5Y9 1956 aa10.37□□□□□ -0.75
PDGFC-202ENST00000422544 PPP6R2O75170 966 aa10.37□□□□□ -0.75
PDGFC-202ENST00000422544 LYPLA2O95372 231 aa10.37□□□□□ -0.75
PDGFC-202ENST00000422544 SYN1P17600 705 aa10.37□□□□□ -0.75
PDGFC-202ENST00000422544 KLRC1P26715 233 aa10.37□□□□□ -0.75
PDGFC-202ENST00000422544 LONP1P36776 959 aaKnown RBP10.37□□□□□ -0.75
PDGFC-202ENST00000422544 NPEPPSP55786 919 aa10.37□□□□□ -0.75
PDGFC-202ENST00000422544 KRT85P78386 507 aa10.37□□□□□ -0.75
PDGFC-202ENST00000422544 TARBP2Q15633 366 aaKnown RBP10.37□□□□□ -0.75
PDGFC-202ENST00000422544 MTERF2Q49AM1 385 aa10.37□□□□□ -0.75
PDGFC-202ENST00000422544 HAUS3Q68CZ6 603 aa10.37□□□□□ -0.75
PDGFC-202ENST00000422544 GPR153Q6NV75 609 aa10.37□□□□□ -0.75
PDGFC-202ENST00000422544 POTEGQ6S5H5 508 aa10.37□□□□□ -0.75
PDGFC-202ENST00000422544 MTHFD1LQ6UB35 978 aa10.37□□□□□ -0.75
PDGFC-202ENST00000422544 RUFY4Q6ZNE9 571 aa10.37□□□□□ -0.75
PDGFC-202ENST00000422544 OTUD6AQ7L8S5 288 aa10.37□□□□□ -0.75
PDGFC-202ENST00000422544 CABP7Q86V35 215 aa10.37□□□□□ -0.75
PDGFC-202ENST00000422544 DEFB123Q8N688 67 aa10.37□□□□□ -0.75
PDGFC-202ENST00000422544 KRI1Q8N9T8 703 aaKnown RBP10.37□□□□□ -0.75
PDGFC-202ENST00000422544 PIGOQ8TEQ8 1089 aa10.37□□□□□ -0.75
PDGFC-202ENST00000422544 DHX38Q92620 1227 aaKnown RBP10.37□□□□□ -0.75
PDGFC-202ENST00000422544 WNT8BQ93098 351 aa10.37□□□□□ -0.75
PDGFC-202ENST00000422544 CEP170P1Q96L14 293 aa10.37□□□□□ -0.75
PDGFC-202ENST00000422544 AK8Q96MA6 479 aa10.37□□□□□ -0.75
PDGFC-202ENST00000422544 PLIN2Q99541 437 aa10.37□□□□□ -0.75
PDGFC-202ENST00000422544 CHMP5Q9NZZ3 219 aa10.37□□□□□ -0.75
PDGFC-202ENST00000422544 TUBE1Q9UJT0 475 aa10.37□□□□□ -0.75
PDGFC-202ENST00000422544 RCOR1Q9UKL0 485 aa10.37□□□□□ -0.75
PDGFC-202ENST00000422544 TBX21Q9UL17 535 aa10.37□□□□□ -0.75
PDGFC-202ENST00000422544 KIAA1024Q9UPX6 916 aa10.37□□□□□ -0.75
PDGFC-202ENST00000422544 NR2E3Q9Y5X4 410 aa10.37□□□□□ -0.75
PDGFC-202ENST00000422544 STK24Q9Y6E0 443 aa10.37□□□□□ -0.75
PDGFC-202ENST00000422544 MORC2Q9Y6X9 1032 aaPredicted RBP10.37□□□□□ -0.75
PDGFC-202ENST00000422544 MBLAC1A4D2B0 266 aaPredicted RBP10.36□□□□□ -0.75
PDGFC-202ENST00000422544 KIAA0355O15063 1070 aa10.36□□□□□ -0.75
PDGFC-202ENST00000422544 XRCC6P12956 609 aaKnown RBP eCLIP10.36□□□□□ -0.75
PDGFC-202ENST00000422544 ITGB8P26012 769 aa10.36□□□□□ -0.75
PDGFC-202ENST00000422544 UBA7P41226 1012 aa10.36□□□□□ -0.75
PDGFC-202ENST00000422544 ME1P48163 572 aa10.36□□□□□ -0.75
PDGFC-202ENST00000422544 PTK7Q13308 1070 aa10.36□□□□□ -0.75
PDGFC-202ENST00000422544 XKR9Q5GH70 373 aa10.36□□□□□ -0.75
PDGFC-202ENST00000422544 USP49Q70CQ1 688 aa10.36□□□□□ -0.75
PDGFC-202ENST00000422544 SERINC5Q86VE9 423 aa10.36□□□□□ -0.75
PDGFC-202ENST00000422544 SPDYE1Q8NFV5 336 aaPredicted RBP10.36□□□□□ -0.75
PDGFC-202ENST00000422544 KCNG4Q8TDN1 519 aa10.36□□□□□ -0.75
PDGFC-202ENST00000422544 LEO1Q8WVC0 666 aaPredicted RBP10.36□□□□□ -0.75
PDGFC-202ENST00000422544 EPSTI1Q96J88 318 aa10.36□□□□□ -0.75
PDGFC-202ENST00000422544 GUCD1Q96NT3 240 aa10.36□□□□□ -0.75
PDGFC-202ENST00000422544 PNMA5Q96PV4 448 aa10.36□□□□□ -0.75
PDGFC-202ENST00000422544 NACC1Q96RE7 527 aa10.36□□□□□ -0.75
PDGFC-202ENST00000422544 CEP89Q96ST8 783 aa10.36□□□□□ -0.75
PDGFC-202ENST00000422544 NOC4LQ9BVI4 516 aaKnown RBP10.36□□□□□ -0.75
PDGFC-202ENST00000422544 PPP1R12CQ9BZL4 782 aa10.36□□□□□ -0.75
PDGFC-202ENST00000422544 HIPK3Q9H422 1215 aa10.36□□□□□ -0.75
PDGFC-202ENST00000422544 CYP26B1Q9NR63 512 aa10.36□□□□□ -0.75
PDGFC-202ENST00000422544 DDX19AQ9NUU7 478 aaKnown RBP10.36□□□□□ -0.75
PDGFC-202ENST00000422544 PRKAG2Q9UGJ0 569 aa10.36□□□□□ -0.75
PDGFC-202ENST00000422544 PCDHA7Q9UN72 937 aa10.36□□□□□ -0.75
PDGFC-202ENST00000422544 PCDHA2Q9Y5H9 948 aa10.36□□□□□ -0.75
PDGFC-202ENST00000422544 COL1A2P08123 1366 aa10.36□□□□□ -0.75
PDGFC-202ENST00000422544 UMODL1Q5DID0 1318 aa10.35□□□□□ -0.75
PDGFC-202ENST00000422544 MYO9BQ13459 2157 aa10.35□□□□□ -0.75
PDGFC-202ENST00000422544 MAGEB2O15479 319 aa10.35□□□□□ -0.75
PDGFC-202ENST00000422544 CUTAO60888 179 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms