RNA–Protein interactions for RNA: ENST00000420377.6

PTPN22-202, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN22, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-202ENST00000420377 GRAMD2AQ8IUY3 354 aa4.54□□□□□ -1.68
PTPN22-202ENST00000420377 SYCP3Q8IZU3 236 aa4.54□□□□□ -1.68
PTPN22-202ENST00000420377 RNF10Q8N5U6 811 aaKnown RBP4.54□□□□□ -1.68
PTPN22-202ENST00000420377 TRIML2Q8N7C3 387 aa4.54□□□□□ -1.68
PTPN22-202ENST00000420377 SMARCC2Q8TAQ2 1214 aa4.54□□□□□ -1.68
PTPN22-202ENST00000420377 GDAP1Q8TB36 358 aa4.54□□□□□ -1.68
PTPN22-202ENST00000420377 DHX38Q92620 1227 aaKnown RBP4.54□□□□□ -1.68
PTPN22-202ENST00000420377 DPF3Q92784 378 aa4.54□□□□□ -1.68
PTPN22-202ENST00000420377 NELL1Q92832 810 aa4.54□□□□□ -1.68
PTPN22-202ENST00000420377 THAP11Q96EK4 314 aa4.54□□□□□ -1.68
PTPN22-202ENST00000420377 CFAP36Q96G28 342 aa4.54□□□□□ -1.68
PTPN22-202ENST00000420377 USP26Q9BXU7 913 aa4.54□□□□□ -1.68
PTPN22-202ENST00000420377 EIF2AQ9BY44 585 aaKnown RBP4.54□□□□□ -1.68
PTPN22-202ENST00000420377 DNAI2Q9GZS0 605 aa4.54□□□□□ -1.68
PTPN22-202ENST00000420377 ACBD3Q9H3P7 528 aa4.54□□□□□ -1.68
PTPN22-202ENST00000420377 TUT1Q9H6E5 874 aaKnown RBP4.54□□□□□ -1.68
PTPN22-202ENST00000420377 OGDHLQ9ULD0 1010 aa4.54□□□□□ -1.68
PTPN22-202ENST00000420377 PCDHB2Q9Y5E7 798 aa4.54□□□□□ -1.68
PTPN22-202ENST00000420377 DDX60LQ5H9U9 1706 aaKnown RBP4.54□□□□□ -1.68
PTPN22-202ENST00000420377 CCDC162PA2VCL2 907 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 A6NJY4 79 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 H0YC42 278 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 PSMD14O00487 310 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 SNPHO15079 494 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 MGAMO43451 1857 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 KCNJ13O60928 360 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 PTCD1O75127 700 aaKnown RBP4.53□□□□□ -1.68
PTPN22-202ENST00000420377 SMNDC1O75940 238 aaKnown RBP eCLIP4.53□□□□□ -1.68
PTPN22-202ENST00000420377 CCNYL3P0C7X3 344 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 PCP11498 1178 aaKnown RBP4.53□□□□□ -1.68
PTPN22-202ENST00000420377 ATF7P17544 494 aaPredicted RBP4.53□□□□□ -1.68
PTPN22-202ENST00000420377 HALP42357 657 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 CASP2P42575 452 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 XDHP47989 1333 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 TPD52P55327 224 aaPredicted RBP4.53□□□□□ -1.68
PTPN22-202ENST00000420377 FCGRTP55899 365 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 PPATQ06203 517 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 LRP8Q14114 963 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 TOMM20Q15388 145 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 PTPRNQ16849 979 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 SHROOM1Q2M3G4 852 aaPredicted RBP4.53□□□□□ -1.68
PTPN22-202ENST00000420377 LRRFIP1Q32MZ4 808 aaKnown RBP4.53□□□□□ -1.68
PTPN22-202ENST00000420377 FKBP15Q5T1M5 1219 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 CYP26C1Q6V0L0 522 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 FAM83AQ86UY5 434 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 ANKMY2Q8IV38 441 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 MOGAT1Q96PD6 335 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 SERINC2Q96SA4 455 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 SLC5A4Q9NY91 659 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 STAP2Q9UGK3 403 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 FAM184BQ9ULE4 1060 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 ZNF148Q9UQR1 794 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 SH3TC1Q8TE82 1336 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 BTBD11A6QL63 1104 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 PRSS47A8MTI9 375 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 B4DLN1 442 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 PAHP00439 452 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 XRCC5P13010 732 aaKnown RBP4.53□□□□□ -1.68
PTPN22-202ENST00000420377 JUNDP17535 347 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 TRAPPC10P48553 1259 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 DR1Q01658 176 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 RAPGEF1Q13905 1077 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 BCL2A1Q16548 175 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 LINC01559Q495D7 138 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 SPECC1Q5M775 1068 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 ARMC4Q5T2S8 1044 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 NEPROQ6NW34 567 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 DGLUCYQ7Z3D6 616 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 CARNMT1Q8N4J0 409 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 GALNT6Q8NCL4 622 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 FLCNQ8NFG4 579 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 TPCN2Q8NHX9 752 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 RSAD2Q8WXG1 361 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 CDKL2Q92772 493 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 SDCCAG3Q96C92 435 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 CCT7Q99832 543 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 PLA2G12BQ9BX93 195 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 PCDH12Q9NPG4 1184 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 CUEDC1Q9NWM3 386 aaPredicted RBP4.53□□□□□ -1.68
PTPN22-202ENST00000420377 DDX56Q9NY93 547 aaKnown RBP4.53□□□□□ -1.68
PTPN22-202ENST00000420377 ATXN10Q9UBB4 475 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 EVLQ9UI08 416 aaPredicted RBP4.53□□□□□ -1.68
PTPN22-202ENST00000420377 ZNF112Q9UJU3 913 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 COG5Q9UP83 839 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 DAAM1Q9Y4D1 1078 aa4.53□□□□□ -1.68
PTPN22-202ENST00000420377 POTEB3A0JP26 581 aa4.52□□□□□ -1.69
PTPN22-202ENST00000420377 SOWAHDA6NJG2 315 aa4.52□□□□□ -1.69
PTPN22-202ENST00000420377 SFI1A8K8P3 1242 aa4.52□□□□□ -1.69
PTPN22-202ENST00000420377 YDJCA8MPS7 323 aa4.52□□□□□ -1.69
PTPN22-202ENST00000420377 TBX3O15119 743 aa4.52□□□□□ -1.69
PTPN22-202ENST00000420377 WDR46O15213 610 aaKnown RBP4.52□□□□□ -1.69
PTPN22-202ENST00000420377 TEX28O15482 410 aa4.52□□□□□ -1.69
PTPN22-202ENST00000420377 ST18O60284 1047 aa4.52□□□□□ -1.69
PTPN22-202ENST00000420377 ECE2O60344 883 aa4.52□□□□□ -1.69
PTPN22-202ENST00000420377 NMT2O60551 498 aa4.52□□□□□ -1.69
PTPN22-202ENST00000420377 GFPT2O94808 682 aa4.52□□□□□ -1.69
PTPN22-202ENST00000420377 STAU1O95793 577 aaKnown RBP4.52□□□□□ -1.69
PTPN22-202ENST00000420377 SFTPCP11686 197 aa4.52□□□□□ -1.69
PTPN22-202ENST00000420377 GZMAP12544 262 aa4.52□□□□□ -1.69
PTPN22-202ENST00000420377 SLC16A2P36021 539 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms