RNA–Protein interactions for RNA: ENST00000419020.1

DDX39B-205, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-205ENST00000419020 IER5Q5VY09 327 aa13.48□□□□□ -0.25
DDX39B-205ENST00000419020 CCDC149Q6ZUS6 474 aa13.48□□□□□ -0.25
DDX39B-205ENST00000419020 FAM49AQ9H0Q0 323 aaPredicted RBP13.48□□□□□ -0.25
DDX39B-205ENST00000419020 EPC1Q9H2F5 836 aa13.48□□□□□ -0.25
DDX39B-205ENST00000419020 PCDHGA2Q9Y5H1 932 aa13.48□□□□□ -0.25
DDX39B-205ENST00000419020 GCN1Q92616 2671 aaKnown RBP13.48□□□□□ -0.25
DDX39B-205ENST00000419020 SOBPA7XYQ1 873 aa13.47□□□□□ -0.25
DDX39B-205ENST00000419020 LRRN2O75325 713 aa13.47□□□□□ -0.25
DDX39B-205ENST00000419020 FGRP09769 529 aa13.47□□□□□ -0.25
DDX39B-205ENST00000419020 FGFR1P11362 822 aa13.47□□□□□ -0.25
DDX39B-205ENST00000419020 EPCAMP16422 314 aa13.47□□□□□ -0.25
DDX39B-205ENST00000419020 CCND2P30279 289 aa13.47□□□□□ -0.25
DDX39B-205ENST00000419020 GHRHRQ02643 423 aa13.47□□□□□ -0.25
DDX39B-205ENST00000419020 KRT17Q04695 432 aa13.47□□□□□ -0.25
DDX39B-205ENST00000419020 TMEM62Q0P6H9 643 aa13.47□□□□□ -0.25
DDX39B-205ENST00000419020 NEDD9Q14511 834 aa13.47□□□□□ -0.25
DDX39B-205ENST00000419020 TMEM266Q2M3C6 531 aa13.47□□□□□ -0.25
DDX39B-205ENST00000419020 QRICH1Q2TAL8 776 aa13.47□□□□□ -0.25
DDX39B-205ENST00000419020 KCNT2Q6UVM3 1135 aa13.47□□□□□ -0.25
DDX39B-205ENST00000419020 LRRC55Q6ZSA7 311 aa13.47□□□□□ -0.25
DDX39B-205ENST00000419020 ADGRF4Q8IZF3 695 aa13.47□□□□□ -0.25
DDX39B-205ENST00000419020 PJA1Q8NG27 643 aa13.47□□□□□ -0.25
DDX39B-205ENST00000419020 NETO1Q8TDF5 533 aa13.47□□□□□ -0.25
DDX39B-205ENST00000419020 ATRIPQ8WXE1 791 aa13.47□□□□□ -0.25
DDX39B-205ENST00000419020 FOXQ1Q9C009 403 aa13.47□□□□□ -0.25
DDX39B-205ENST00000419020 TCP11L1Q9NUJ3 509 aa13.47□□□□□ -0.25
DDX39B-205ENST00000419020 ANAPC4Q9UJX5 808 aa13.47□□□□□ -0.25
DDX39B-205ENST00000419020 TRPV2Q9Y5S1 764 aa13.47□□□□□ -0.25
DDX39B-205ENST00000419020 N4BP1O75113 896 aaKnown RBP13.46□□□□□ -0.25
DDX39B-205ENST00000419020 PROS1P07225 676 aa13.46□□□□□ -0.25
DDX39B-205ENST00000419020 SRFP11831 508 aa13.46□□□□□ -0.25
DDX39B-205ENST00000419020 KCNA4P22459 653 aa13.46□□□□□ -0.25
DDX39B-205ENST00000419020 MARK3P27448 753 aa13.46□□□□□ -0.25
DDX39B-205ENST00000419020 HOXA13P31271 388 aaPredicted RBP13.46□□□□□ -0.25
DDX39B-205ENST00000419020 PPM1AP35813 382 aa13.46□□□□□ -0.25
DDX39B-205ENST00000419020 SHC2P98077 582 aa13.46□□□□□ -0.25
DDX39B-205ENST00000419020 SP4Q02446 784 aa13.46□□□□□ -0.25
DDX39B-205ENST00000419020 SEMA3FQ13275 785 aa13.46□□□□□ -0.25
DDX39B-205ENST00000419020 RRP12Q5JTH9 1297 aaKnown RBP13.46□□□□□ -0.25
DDX39B-205ENST00000419020 GPR149Q86SP6 731 aa13.46□□□□□ -0.25
DDX39B-205ENST00000419020 SIRT2Q8IXJ6 389 aa13.46□□□□□ -0.25
DDX39B-205ENST00000419020 SLC44A3Q8N4M1 653 aa13.46□□□□□ -0.25
DDX39B-205ENST00000419020 ZBTB44Q8NCP5 570 aa13.46□□□□□ -0.25
DDX39B-205ENST00000419020 GPR152Q8TDT2 470 aa13.46□□□□□ -0.25
DDX39B-205ENST00000419020 ARHGEF3Q9NR81 526 aa13.46□□□□□ -0.25
DDX39B-205ENST00000419020 FBXO4Q9UKT5 387 aa13.46□□□□□ -0.25
DDX39B-205ENST00000419020 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.46□□□□□ -0.25
DDX39B-205ENST00000419020 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.45□□□□□ -0.26
DDX39B-205ENST00000419020 SPATA31C2B4DYI2 1134 aa13.45□□□□□ -0.26
DDX39B-205ENST00000419020 C9IYK1 514 aa13.45□□□□□ -0.26
DDX39B-205ENST00000419020 CA8P35219 290 aa13.45□□□□□ -0.26
DDX39B-205ENST00000419020 CSTF1Q05048 431 aaKnown RBP13.45□□□□□ -0.26
DDX39B-205ENST00000419020 NFX1Q12986 1120 aaKnown RBP13.45□□□□□ -0.26
DDX39B-205ENST00000419020 SLC24A5Q71RS6 500 aa13.45□□□□□ -0.26
DDX39B-205ENST00000419020 CABP7Q86V35 215 aa13.45□□□□□ -0.26
DDX39B-205ENST00000419020 ZNF558Q96NG5 402 aa13.45□□□□□ -0.26
DDX39B-205ENST00000419020 ADAM2Q99965 735 aa13.45□□□□□ -0.26
DDX39B-205ENST00000419020 RGS18Q9NS28 235 aa13.45□□□□□ -0.26
DDX39B-205ENST00000419020 TOMM22Q9NS69 142 aa13.45□□□□□ -0.26
DDX39B-205ENST00000419020 SPG21Q9NZD8 308 aa13.45□□□□□ -0.26
DDX39B-205ENST00000419020 MYH6P13533 1939 aa13.45□□□□□ -0.26
DDX39B-205ENST00000419020 DENND3A2RUS2 1198 aa13.44□□□□□ -0.26
DDX39B-205ENST00000419020 M0QZ92 97 aa13.44□□□□□ -0.26
DDX39B-205ENST00000419020 LAMTOR5O43504 91 aa13.44□□□□□ -0.26
DDX39B-205ENST00000419020 LILRB5O75023 590 aa13.44□□□□□ -0.26
DDX39B-205ENST00000419020 CXCL14O95715 111 aa13.44□□□□□ -0.26
DDX39B-205ENST00000419020 RPLP2P05387 115 aaKnown RBP13.44□□□□□ -0.26
DDX39B-205ENST00000419020 IGBP1P78318 339 aa13.44□□□□□ -0.26
DDX39B-205ENST00000419020 SPEM2Q0P670 501 aa13.44□□□□□ -0.26
DDX39B-205ENST00000419020 NONOQ15233 471 aaKnown RBP eCLIP13.44□□□□□ -0.26
DDX39B-205ENST00000419020 LETM2Q2VYF4 491 aa13.44□□□□□ -0.26
DDX39B-205ENST00000419020 SLC22A17Q8WUG5 538 aa13.44□□□□□ -0.26
DDX39B-205ENST00000419020 TTC14Q96N46 770 aa13.44□□□□□ -0.26
DDX39B-205ENST00000419020 INPP4AQ96PE3 977 aaPredicted RBP13.44□□□□□ -0.26
DDX39B-205ENST00000419020 CELF4Q9BZC1 486 aaKnown RBP13.44□□□□□ -0.26
DDX39B-205ENST00000419020 C1orf112Q9NSG2 853 aa13.44□□□□□ -0.26
DDX39B-205ENST00000419020 ECHDC1Q9NTX5 307 aa13.44□□□□□ -0.26
DDX39B-205ENST00000419020 SPATA6Q9NWH7 488 aaPredicted RBP13.44□□□□□ -0.26
DDX39B-205ENST00000419020 ZMIZ1Q9ULJ6 1067 aa13.44□□□□□ -0.26
DDX39B-205ENST00000419020 PCDHA1Q9Y5I3 950 aa13.44□□□□□ -0.26
DDX39B-205ENST00000419020 IGF2RP11717 2491 aa13.44□□□□□ -0.26
DDX39B-205ENST00000419020 C2orf16Q68DN1 1984 aa13.43□□□□□ -0.26
DDX39B-205ENST00000419020 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.43□□□□□ -0.26
DDX39B-205ENST00000419020 TCF7P36402 384 aaPredicted RBP13.43□□□□□ -0.26
DDX39B-205ENST00000419020 MRPS9P82933 396 aaKnown RBP13.43□□□□□ -0.26
DDX39B-205ENST00000419020 GNPTABQ3T906 1256 aa13.43□□□□□ -0.26
DDX39B-205ENST00000419020 N4BP2L1Q5TBK1 243 aaPredicted RBP13.43□□□□□ -0.26
DDX39B-205ENST00000419020 DCLRE1AQ6PJP8 1040 aa13.43□□□□□ -0.26
DDX39B-205ENST00000419020 SLC39A11Q8N1S5 342 aa13.43□□□□□ -0.26
DDX39B-205ENST00000419020 AUTS2Q8WXX7 1259 aa13.43□□□□□ -0.26
DDX39B-205ENST00000419020 NELL1Q92832 810 aa13.43□□□□□ -0.26
DDX39B-205ENST00000419020 GLG1Q92896 1179 aa13.43□□□□□ -0.26
DDX39B-205ENST00000419020 CASD1Q96PB1 797 aa13.43□□□□□ -0.26
DDX39B-205ENST00000419020 SFXN1Q9H9B4 322 aa13.43□□□□□ -0.26
DDX39B-205ENST00000419020 JMJD4Q9H9V9 463 aa13.43□□□□□ -0.26
DDX39B-205ENST00000419020 ATP6V0A4Q9HBG4 840 aa13.43□□□□□ -0.26
DDX39B-205ENST00000419020 TMEM161AQ9NX61 479 aa13.43□□□□□ -0.26
DDX39B-205ENST00000419020 ZSCAN32Q9NX65 697 aa13.43□□□□□ -0.26
DDX39B-205ENST00000419020 MAP3K20Q9NYL2 800 aaKnown RBP13.43□□□□□ -0.26
DDX39B-205ENST00000419020 ERAP1Q9NZ08 941 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms