RNA–Protein interactions for RNA: ENST00000418288.5

RFC4-205, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-205ENST00000418288 KRT20P35900 424 aa5.06□□□□□ -1.6
RFC4-205ENST00000418288 CLK1P49759 484 aaKnown RBP5.06□□□□□ -1.6
RFC4-205ENST00000418288 TUBP50607 506 aa5.06□□□□□ -1.6
RFC4-205ENST00000418288 DCAF7P61962 342 aa5.06□□□□□ -1.6
RFC4-205ENST00000418288 KRT83P78385 493 aa5.06□□□□□ -1.6
RFC4-205ENST00000418288 ST5P78524 1137 aa5.06□□□□□ -1.6
RFC4-205ENST00000418288 IRF9Q00978 393 aa5.06□□□□□ -1.6
RFC4-205ENST00000418288 CTBSQ01459 385 aa5.06□□□□□ -1.6
RFC4-205ENST00000418288 CACNB2Q08289 660 aaPredicted RBP5.06□□□□□ -1.6
RFC4-205ENST00000418288 FOXO1Q12778 655 aa5.06□□□□□ -1.6
RFC4-205ENST00000418288 KCNAB2Q13303 367 aa5.06□□□□□ -1.6
RFC4-205ENST00000418288 TAF12Q16514 161 aa5.06□□□□□ -1.6
RFC4-205ENST00000418288 TBC1D10BQ4KMP7 808 aaPredicted RBP5.06□□□□□ -1.6
RFC4-205ENST00000418288 ANGEL2Q5VTE6 544 aaKnown RBP5.06□□□□□ -1.6
RFC4-205ENST00000418288 MSL1Q68DK7 614 aa5.06□□□□□ -1.6
RFC4-205ENST00000418288 JMJD6Q6NYC1 403 aaPredicted RBP5.06□□□□□ -1.6
RFC4-205ENST00000418288 DSTYKQ6XUX3 929 aa5.06□□□□□ -1.6
RFC4-205ENST00000418288 LRRTM4Q86VH4 590 aa5.06□□□□□ -1.6
RFC4-205ENST00000418288 HEATR4Q86WZ0 1026 aa5.06□□□□□ -1.6
RFC4-205ENST00000418288 LIX1LQ8IVB5 337 aa5.06□□□□□ -1.6
RFC4-205ENST00000418288 SYTL1Q8IYJ3 562 aa5.06□□□□□ -1.6
RFC4-205ENST00000418288 CHCHD4Q8N4Q1 142 aa5.06□□□□□ -1.6
RFC4-205ENST00000418288 MARCH10Q8NA82 808 aaPredicted RBP5.06□□□□□ -1.6
RFC4-205ENST00000418288 RCBTB1Q8NDN9 531 aa5.06□□□□□ -1.6
RFC4-205ENST00000418288 PLBD2Q8NHP8 589 aa5.06□□□□□ -1.6
RFC4-205ENST00000418288 GOLGA1Q92805 767 aa5.06□□□□□ -1.6
RFC4-205ENST00000418288 FERMT2Q96AC1 680 aa5.06□□□□□ -1.6
RFC4-205ENST00000418288 KLHDC7BQ96G42 594 aa5.06□□□□□ -1.6
RFC4-205ENST00000418288 ZSCAN31Q96LW9 406 aaPredicted RBP5.06□□□□□ -1.6
RFC4-205ENST00000418288 FANCD2OSQ96PS1 177 aa5.06□□□□□ -1.6
RFC4-205ENST00000418288 NUDT16L1Q9BRJ7 211 aaKnown RBP5.06□□□□□ -1.6
RFC4-205ENST00000418288 ASPNQ9BXN1 380 aa5.06□□□□□ -1.6
RFC4-205ENST00000418288 LMAN2LQ9H0V9 348 aa5.06□□□□□ -1.6
RFC4-205ENST00000418288 CDIP1Q9H305 208 aa5.06□□□□□ -1.6
RFC4-205ENST00000418288 HELLSQ9NRZ9 838 aa5.06□□□□□ -1.6
RFC4-205ENST00000418288 GPATCH2Q9NW75 528 aa5.06□□□□□ -1.6
RFC4-205ENST00000418288 RNF112Q9ULX5 631 aa5.06□□□□□ -1.6
RFC4-205ENST00000418288 MAGED1Q9Y5V3 778 aaPredicted RBP5.06□□□□□ -1.6
RFC4-205ENST00000418288 BACE2Q9Y5Z0 518 aa5.06□□□□□ -1.6
RFC4-205ENST00000418288 FAM170AA1A519 330 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 SYNDIG1LA6NDD5 238 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 FAM47E-STBD1D6RA91 191 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 RBAK-RBAKDNI3L0D1 243 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 DDX3XO00571 662 aaKnown RBP eCLIP5.05□□□□□ -1.66e-13■■■□□ 17.4
RFC4-205ENST00000418288 ACKR2O00590 384 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 GSTA4O15217 222 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 MAN1A2O60476 641 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 TIPRLO75663 272 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 AMY2AP04746 511 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 PLS3P13797 630 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 HNRNPLP14866 589 aaKnown RBP eCLIP5.05□□□□□ -1.6
RFC4-205ENST00000418288 AMY2BP19961 511 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 PTX3P26022 381 aaPredicted RBP5.05□□□□□ -1.6
RFC4-205ENST00000418288 HOXC13P31276 330 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 GRK3P35626 688 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 ADH7P40394 386 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 IL12RB1P42701 662 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 ALDH9A1P49189 494 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 MANFP55145 182 aaKnown RBP5.05□□□□□ -1.6
RFC4-205ENST00000418288 JAM2P57087 298 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 KIF22Q14807 665 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 SEPT2Q15019 361 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 ZNF174Q15697 407 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 MEA1Q16626 185 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 IFI16Q16666 785 aaKnown RBP5.05□□□□□ -1.6
RFC4-205ENST00000418288 SLC35G1Q2M3R5 365 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 ZACNQ401N2 412 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 HP1BP3Q5SSJ5 553 aaPredicted RBP5.05□□□□□ -1.6
RFC4-205ENST00000418288 CCDC30Q5VVM6 783 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 PSAPL1Q6NUJ1 521 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 HHIPL2Q6UWX4 724 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 DAAM2Q86T65 1068 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 CXorf67Q86X51 503 aaPredicted RBP5.05□□□□□ -1.6
RFC4-205ENST00000418288 SNX32Q86XE0 403 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 NOSTRINQ8IVI9 506 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 SIRT2Q8IXJ6 389 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 IL22RA1Q8N6P7 574 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 KLHDC4Q8TBB5 520 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 PANK1Q8TE04 598 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 RNF141Q8WVD5 230 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 ZNF496Q96IT1 587 aaPredicted RBP5.05□□□□□ -1.6
RFC4-205ENST00000418288 ZMAT2Q96NC0 199 aaKnown RBP5.05□□□□□ -1.6
RFC4-205ENST00000418288 NT5C1BQ96P26 610 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 TREX2Q9BQ50 279 aaPredicted RBP5.05□□□□□ -1.6
RFC4-205ENST00000418288 COLEC11Q9BWP8 271 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 CARD10Q9BWT7 1032 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 SORBS1Q9BX66 1292 aaKnown RBP5.05□□□□□ -1.6
RFC4-205ENST00000418288 FOXQ1Q9C009 403 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 BRD9Q9H8M2 597 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 GIMAP2Q9UG22 337 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 MAGED2Q9UNF1 606 aaPredicted RBP5.05□□□□□ -1.6
RFC4-205ENST00000418288 LIMCH1Q9UPQ0 1083 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 STXBP5LQ9Y2K9 1186 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 SNX13Q9Y5W8 968 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 ABCC9O60706 1549 aa5.05□□□□□ -1.6
RFC4-205ENST00000418288 USP19O94966 1318 aa5.04□□□□□ -1.6
RFC4-205ENST00000418288 SLC35F4A4IF30 521 aa5.04□□□□□ -1.6
RFC4-205ENST00000418288 GOLGA6L3A6NEY3 463 aa5.04□□□□□ -1.6
RFC4-205ENST00000418288 F5H0A9 414 aaPredicted RBP5.04□□□□□ -1.6
RFC4-205ENST00000418288 H7C1W4 665 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms