RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 PGRMC1O00264 195 aaKnown RBP12.04□□□□□ -0.48
PTCH1-205ENST00000418258 MYL1P05976 194 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 EEF1B2P24534 225 aaKnown RBP12.04□□□□□ -0.48
PTCH1-205ENST00000418258 SLC39A14Q15043 492 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 ZKSCAN8Q15776 578 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-205ENST00000418258 IMPG1Q17R60 797 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 TRIM59Q8IWR1 403 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 MAN1B1Q9UKM7 699 aa12.04□□□□□ -0.48
PTCH1-205ENST00000418258 SASH1O94885 1247 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 ATICP31939 592 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 SUSD4Q5VX71 490 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 FBXO40Q9UH90 709 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 PCDHA6Q9UN73 950 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 PCDHA8Q9Y5H6 950 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 MOCS3O95396 460 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 OCM2P0CE71 109 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 OCMP0CE72 109 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-205ENST00000418258 HSPA6P17066 643 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 IFNA8P32881 189 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 EXOC1LA0A1B0GW35 172 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 E5RI56 91 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 GPC3P51654 580 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 C2orf54Q08AI8 447 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 PI16Q6UXB8 463 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 SPATA33Q96N06 139 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 LSG1Q9H089 658 aaKnown RBP12.03□□□□□ -0.48
PTCH1-205ENST00000418258 PPP1R9AQ9ULJ8 1098 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 CYP27A1Q02318 531 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 ANO4Q32M45 955 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 ADCK5Q3MIX3 580 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 NUDT18Q6ZVK8 323 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 ARHGEF25Q86VW2 580 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 DRC3Q9H069 523 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 PCDHA5Q9Y5H7 936 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 ZNF302Q9NR11 478 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 HEY1Q9Y5J3 304 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.03□□□□□ -0.48
PTCH1-205ENST00000418258 RGS12O14924 1447 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 SH2B2O14492 632 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-205ENST00000418258 TAC1P20366 129 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 PTK2BQ14289 1009 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 SLC35F6Q8N357 371 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 BHMT2Q9H2M3 363 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 RWDD2AQ9UIY3 292 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 SUFUQ9UMX1 484 aa12.03□□□□□ -0.48
PTCH1-205ENST00000418258 PYGLP06737 847 aa12.02□□□□□ -0.48
PTCH1-205ENST00000418258 KCNA1Q09470 495 aa12.02□□□□□ -0.48
PTCH1-205ENST00000418258 ATG16L1Q676U5 607 aa12.02□□□□□ -0.48
PTCH1-205ENST00000418258 MAML1Q92585 1016 aa12.02□□□□□ -0.48
PTCH1-205ENST00000418258 G3BP2Q9UN86 482 aaKnown RBP12.02□□□□□ -0.48
PTCH1-205ENST00000418258 TAF1BQ53T94 588 aaPredicted RBP12.02□□□□□ -0.48
PTCH1-205ENST00000418258 TRMT10CQ7L0Y3 403 aaKnown RBP12.02□□□□□ -0.48
PTCH1-205ENST00000418258 PBKQ96KB5 322 aa12.02□□□□□ -0.48
PTCH1-205ENST00000418258 ATG3Q9NT62 314 aa12.02□□□□□ -0.48
PTCH1-205ENST00000418258 TSR3Q9UJK0 312 aaKnown RBP12.02□□□□□ -0.48
PTCH1-205ENST00000418258 SYNMO15061 1565 aa12.02□□□□□ -0.48
PTCH1-205ENST00000418258 USP17L10C9JJH3 530 aa12.02□□□□□ -0.48
PTCH1-205ENST00000418258 ZMYND10O75800 440 aa12.02□□□□□ -0.48
PTCH1-205ENST00000418258 TMCC1O94876 653 aa12.02□□□□□ -0.48
PTCH1-205ENST00000418258 FTCDO95954 541 aa12.02□□□□□ -0.48
PTCH1-205ENST00000418258 BCAS4Q8TDM0 211 aa12.02□□□□□ -0.48
PTCH1-205ENST00000418258 MAP4K1Q92918 833 aa12.02□□□□□ -0.48
PTCH1-205ENST00000418258 NHEJ1Q9H9Q4 299 aaPredicted RBP12.02□□□□□ -0.48
PTCH1-205ENST00000418258 TEKT2Q9UIF3 430 aa12.02□□□□□ -0.48
PTCH1-205ENST00000418258 DNAJC8O75937 253 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-205ENST00000418258 PAPOLAP51003 745 aaKnown RBP12.02□□□□□ -0.49
PTCH1-205ENST00000418258 NME3Q13232 169 aa12.02□□□□□ -0.49
PTCH1-205ENST00000418258 VPS39Q96JC1 886 aa12.02□□□□□ -0.49
PTCH1-205ENST00000418258 MAP3K20Q9NYL2 800 aaKnown RBP12.02□□□□□ -0.49
PTCH1-205ENST00000418258 SLC4A7Q9Y6M7 1214 aa12.02□□□□□ -0.49
PTCH1-205ENST00000418258 KLC2Q9H0B6 622 aa12.02□□□□□ -0.49
PTCH1-205ENST00000418258 POLR3EQ9NVU0 708 aa12.02□□□□□ -0.49
PTCH1-205ENST00000418258 PRPF3O43395 683 aaKnown RBP12.02□□□□□ -0.49
PTCH1-205ENST00000418258 ASIC4Q96FT7 647 aa12.02□□□□□ -0.49
PTCH1-205ENST00000418258 CLASP1Q7Z460 1538 aa12.02□□□□□ -0.49
PTCH1-205ENST00000418258 PLEKHG1Q9ULL1 1385 aa12.02□□□□□ -0.49
PTCH1-205ENST00000418258 CYP21A2P08686 494 aa12.02□□□□□ -0.49
PTCH1-205ENST00000418258 RASGRF1Q13972 1273 aa12.02□□□□□ -0.49
PTCH1-205ENST00000418258 PPP4R3CPQ6ZMV5 832 aa12.02□□□□□ -0.49
PTCH1-205ENST00000418258 CENPUQ71F23 418 aa12.01□□□□□ -0.49
PTCH1-205ENST00000418258 HECW2Q9P2P5 1572 aa12.01□□□□□ -0.49
PTCH1-205ENST00000418258 CA4P22748 312 aa12.01□□□□□ -0.49
PTCH1-205ENST00000418258 SLCO1A2P46721 670 aa12.01□□□□□ -0.49
PTCH1-205ENST00000418258 KCNJ6P48051 423 aa12.01□□□□□ -0.49
PTCH1-205ENST00000418258 PTPN21Q16825 1174 aa12.01□□□□□ -0.49
PTCH1-205ENST00000418258 MCPH1Q8NEM0 835 aa12.01□□□□□ -0.49
PTCH1-205ENST00000418258 SP110Q9HB58 689 aa12.01□□□□□ -0.49
PTCH1-205ENST00000418258 DNAJC6O75061 913 aa12.01□□□□□ -0.49
PTCH1-205ENST00000418258 CPB1P15086 417 aa12.01□□□□□ -0.49
PTCH1-205ENST00000418258 VEPH1Q14D04 833 aa12.01□□□□□ -0.49
PTCH1-205ENST00000418258 SH3KBP1Q96B97 665 aa12.01□□□□□ -0.49
PTCH1-205ENST00000418258 ZBTB18Q99592 522 aa12.01□□□□□ -0.49
PTCH1-205ENST00000418258 SCHIP1Q9P0W5 487 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-205ENST00000418258 AFF2P51816 1311 aa12.01□□□□□ -0.49
PTCH1-205ENST00000418258 PRELPP51888 382 aa12.01□□□□□ -0.49
PTCH1-205ENST00000418258 NCLNQ969V3 563 aa12.01□□□□□ -0.49
PTCH1-205ENST00000418258 NEUROG2Q9H2A3 272 aa12.01□□□□□ -0.49
PTCH1-205ENST00000418258 SCINQ9Y6U3 715 aa12.01□□□□□ -0.49
PTCH1-205ENST00000418258 ATP7BP35670 1465 aa12.01□□□□□ -0.49
PTCH1-205ENST00000418258 IQANK1A0A1B0GTG1 560 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms