RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 GINS2Q9Y248 185 aa8.99□□□□□ -0.97
HLA-DPA1-241ENST00000417724 LZTS1Q9Y250 596 aa8.99□□□□□ -0.97
HLA-DPA1-241ENST00000417724 NR2E1Q9Y466 385 aa8.99□□□□□ -0.97
HLA-DPA1-241ENST00000417724 PCDHA8Q9Y5H6 950 aa8.99□□□□□ -0.97
HLA-DPA1-241ENST00000417724 RIF1Q5UIP0 2472 aaKnown RBP8.99□□□□□ -0.97
HLA-DPA1-241ENST00000417724 SPTBN4Q9H254 2564 aa8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 C9IYK1 514 aa8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 H0Y858 1186 aa8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 CALM1P0DP23 149 aa8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 CALM2P0DP24 149 aa8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 CALM3P0DP25 149 aa8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 LAG3P18627 525 aa8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 TECP42680 631 aa8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 ANTXR2P58335 489 aa8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 ACTR2P61160 394 aa8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 RBM10P98175 930 aaKnown RBP8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 PTH1RQ03431 593 aa8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 FAM102BQ5T8I3 360 aa8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 ANKRD54Q6NXT1 300 aa8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 CASC1Q6TDU7 716 aa8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 NFXL1Q6ZNB6 911 aa8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 SRBD1Q8N5C6 995 aaKnown RBP8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 COLGALT1Q8NBJ5 622 aa8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 VN1R2Q8NFZ6 395 aa8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 RIPOR3Q96MK2 946 aa8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 MXRA8Q9BRK3 442 aa8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 MYL10Q9BUA6 226 aa8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 ATP6V0A4Q9HBG4 840 aa8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 LY9Q9HBG7 655 aa8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 ERVK-5Q9HDB9 667 aa8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 NGRNQ9NPE2 291 aaKnown RBP8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 TYW1Q9NV66 732 aaKnown RBP8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 TMEM161AQ9NX61 479 aa8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 ST3GAL5Q9UNP4 418 aa8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 NOC2LQ9Y3T9 749 aaKnown RBP8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 NFASCO94856 1347 aa8.98□□□□□ -0.97
HLA-DPA1-241ENST00000417724 FAM186AA6NE01 2351 aa8.97□□□□□ -0.97
HLA-DPA1-241ENST00000417724 CCDC69A6NI79 296 aa8.97□□□□□ -0.97
HLA-DPA1-241ENST00000417724 PROB1E7EW31 1015 aa8.97□□□□□ -0.97
HLA-DPA1-241ENST00000417724 FSCN2O14926 492 aa8.97□□□□□ -0.97
HLA-DPA1-241ENST00000417724 HBP1O60381 514 aa8.97□□□□□ -0.97
HLA-DPA1-241ENST00000417724 MGEA5O60502 916 aa8.97□□□□□ -0.97
HLA-DPA1-241ENST00000417724 ATG7O95352 703 aa8.97□□□□□ -0.97
HLA-DPA1-241ENST00000417724 PLEKHA8P1O95397 391 aa8.97□□□□□ -0.97
HLA-DPA1-241ENST00000417724 FAM189BP81408 668 aa8.97□□□□□ -0.97
HLA-DPA1-241ENST00000417724 PLCB3Q01970 1234 aa8.97□□□□□ -0.97
HLA-DPA1-241ENST00000417724 KRT17Q04695 432 aa8.97□□□□□ -0.97
HLA-DPA1-241ENST00000417724 KCNC3Q14003 757 aa8.97□□□□□ -0.97
HLA-DPA1-241ENST00000417724 UBE2SQ16763 222 aa8.97□□□□□ -0.97
HLA-DPA1-241ENST00000417724 TPRNQ4KMQ1 711 aa8.97□□□□□ -0.97
HLA-DPA1-241ENST00000417724 FAM160B1Q5W0V3 765 aa8.97□□□□□ -0.97
HLA-DPA1-241ENST00000417724 CES5AQ6NT32 575 aa8.97□□□□□ -0.97
HLA-DPA1-241ENST00000417724 SYCE2Q6PIF2 218 aa8.97□□□□□ -0.97
HLA-DPA1-241ENST00000417724 TEX2Q8IWB9 1127 aa8.97□□□□□ -0.97
HLA-DPA1-241ENST00000417724 MB21D2Q8IYB1 491 aaPredicted RBP8.97□□□□□ -0.97
HLA-DPA1-241ENST00000417724 UBALD2Q8IYN6 164 aa8.97□□□□□ -0.97
HLA-DPA1-241ENST00000417724 KIAA0319LQ8IZA0 1049 aa8.97□□□□□ -0.97
HLA-DPA1-241ENST00000417724 CMTR1Q8N1G2 835 aaKnown RBP8.97□□□□□ -0.97
HLA-DPA1-241ENST00000417724 MRPS27Q92552 414 aaKnown RBP8.97□□□□□ -0.97
HLA-DPA1-241ENST00000417724 TCF25Q9BQ70 676 aa8.97□□□□□ -0.97
HLA-DPA1-241ENST00000417724 ELAC1Q9H777 363 aaKnown RBP8.97□□□□□ -0.97
HLA-DPA1-241ENST00000417724 CDHR5Q9HBB8 845 aa8.97□□□□□ -0.97
HLA-DPA1-241ENST00000417724 ENTPD7Q9NQZ7 604 aa8.97□□□□□ -0.97
HLA-DPA1-241ENST00000417724 TAF6LQ9Y6J9 622 aa8.97□□□□□ -0.97
HLA-DPA1-241ENST00000417724 MYH9P35579 1960 aaKnown RBP8.97□□□□□ -0.97
HLA-DPA1-241ENST00000417724 MEIS1O00470 390 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 BACH1O14867 736 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 HOXA2O43364 376 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 GALR2O43603 387 aaPredicted RBP8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 PRC1O43663 620 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 FOSP01100 380 aaPredicted RBP8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ARP10275 920 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 CHMLP26374 656 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 MCM5P33992 734 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 PPM1AP35813 382 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 CRYBB1P53674 252 aaPredicted RBP8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ITIH3Q06033 890 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 APOBRQ0VD83 1088 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 MTMR3Q13615 1198 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 BMS1Q14692 1282 aaKnown RBP8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 CEP55Q53EZ4 464 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ZNF484Q5JVG2 852 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 TTC22Q5TAA0 569 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 PLPP4Q5VZY2 271 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 LLGL2Q6P1M3 1020 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 KCNT2Q6UVM3 1135 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 TMC7Q7Z402 723 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 HEATR3Q7Z4Q2 680 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 CCDC82Q8N4S0 544 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 KREMEN2Q8NCW0 462 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 CYP2W1Q8TAV3 490 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 MAP4K1Q92918 833 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 TMEM87BQ96K49 555 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 NECTIN4Q96NY8 510 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 APOL5Q9BWW9 433 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 TMEM117Q9H0C3 514 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ADAM7Q9H2U9 754 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 CWH43Q9H720 699 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 TSHZ2Q9NRE2 1034 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 SPG21Q9NZD8 308 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms