RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 FCER1AP12319 257 aa11.45□□□□□ -0.58
COL12A1-203ENST00000416123 ATP1A3P13637 1013 aa11.45□□□□□ -0.58
COL12A1-203ENST00000416123 GCLMP48507 274 aa11.45□□□□□ -0.58
COL12A1-203ENST00000416123 ETF1P62495 437 aaKnown RBP11.45□□□□□ -0.58
COL12A1-203ENST00000416123 KRT31Q15323 416 aa11.45□□□□□ -0.58
COL12A1-203ENST00000416123 LRRC43Q8N309 656 aa11.45□□□□□ -0.58
COL12A1-203ENST00000416123 FAM84BQ96KN1 310 aaPredicted RBP11.45□□□□□ -0.58
COL12A1-203ENST00000416123 NGRNQ9NPE2 291 aaKnown RBP11.45□□□□□ -0.58
COL12A1-203ENST00000416123 HOMER3Q9NSC5 361 aa11.45□□□□□ -0.58
COL12A1-203ENST00000416123 DAAM1Q9Y4D1 1078 aa11.45□□□□□ -0.58
COL12A1-203ENST00000416123 GNAT1P11488 350 aa11.45□□□□□ -0.58
COL12A1-203ENST00000416123 EPHB1P54762 984 aa11.45□□□□□ -0.58
COL12A1-203ENST00000416123 RNF10Q8N5U6 811 aaKnown RBP11.45□□□□□ -0.58
COL12A1-203ENST00000416123 LINC00116Q8NCU8 138 aa11.45□□□□□ -0.58
COL12A1-203ENST00000416123 AFG1LQ8WV93 481 aa11.45□□□□□ -0.58
COL12A1-203ENST00000416123 CAPS2Q9BXY5 557 aa11.45□□□□□ -0.58
COL12A1-203ENST00000416123 NPHP3-ACAD11A0A0J9YXS1 232 aa11.45□□□□□ -0.58
COL12A1-203ENST00000416123 THOC5Q13769 683 aaKnown RBP11.45□□□□□ -0.58
COL12A1-203ENST00000416123 PPP6R3Q5H9R7 873 aaPredicted RBP11.45□□□□□ -0.58
COL12A1-203ENST00000416123 PDCD6IPQ8WUM4 868 aaKnown RBP11.45□□□□□ -0.58
COL12A1-203ENST00000416123 LMCD1Q9NZU5 365 aa11.45□□□□□ -0.58
COL12A1-203ENST00000416123 PIK3R2O00459 728 aa11.45□□□□□ -0.58
COL12A1-203ENST00000416123 MAPK6Q16659 721 aa11.45□□□□□ -0.58
COL12A1-203ENST00000416123 ZNF699Q32M78 642 aa11.45□□□□□ -0.58
COL12A1-203ENST00000416123 RASSF4Q9H2L5 321 aa11.45□□□□□ -0.58
COL12A1-203ENST00000416123 WDR46O15213 610 aaKnown RBP11.44□□□□□ -0.58
COL12A1-203ENST00000416123 KRT33BQ14525 404 aa11.44□□□□□ -0.58
COL12A1-203ENST00000416123 PADI6Q6TGC4 694 aa11.44□□□□□ -0.58
COL12A1-203ENST00000416123 SAAL1Q96ER3 474 aa11.44□□□□□ -0.58
COL12A1-203ENST00000416123 LMNB2Q03252 620 aa11.44□□□□□ -0.58
COL12A1-203ENST00000416123 IQCB1Q15051 598 aa11.44□□□□□ -0.58
COL12A1-203ENST00000416123 THEM5Q8N1Q8 247 aa11.44□□□□□ -0.58
COL12A1-203ENST00000416123 PRCPP42785 496 aa11.44□□□□□ -0.58
COL12A1-203ENST00000416123 HMGCS2P54868 508 aa11.44□□□□□ -0.58
COL12A1-203ENST00000416123 TRIM68Q6AZZ1 485 aa11.44□□□□□ -0.58
COL12A1-203ENST00000416123 MB21D1Q8N884 522 aa11.44□□□□□ -0.58
COL12A1-203ENST00000416123 GIMAP8Q8ND71 665 aaPredicted RBP11.44□□□□□ -0.58
COL12A1-203ENST00000416123 EXT2Q93063 718 aa11.44□□□□□ -0.58
COL12A1-203ENST00000416123 SH2D3AQ9BRG2 576 aa11.44□□□□□ -0.58
COL12A1-203ENST00000416123 GOLPH3LQ9H4A5 285 aa11.44□□□□□ -0.58
COL12A1-203ENST00000416123 ZKSCAN8Q15776 578 aaPredicted RBP11.44□□□□□ -0.58
COL12A1-203ENST00000416123 ARMCX2Q7L311 632 aa11.44□□□□□ -0.58
COL12A1-203ENST00000416123 VCXQ9H320 206 aa11.44□□□□□ -0.58
COL12A1-203ENST00000416123 GPC3P51654 580 aa11.44□□□□□ -0.58
COL12A1-203ENST00000416123 ARHGAP4P98171 946 aa11.44□□□□□ -0.58
COL12A1-203ENST00000416123 CUL4AQ13619 759 aa11.44□□□□□ -0.58
COL12A1-203ENST00000416123 TTLL4Q14679 1199 aa11.44□□□□□ -0.58
COL12A1-203ENST00000416123 RMDN2Q96LZ7 410 aa11.44□□□□□ -0.58
COL12A1-203ENST00000416123 ZBBXA8MT70 800 aa11.44□□□□□ -0.58
COL12A1-203ENST00000416123 GSG1L2A8MUP6 293 aa11.44□□□□□ -0.58
COL12A1-203ENST00000416123 NBPF26B4DH59 902 aa11.44□□□□□ -0.58
COL12A1-203ENST00000416123 ABCD1P33897 745 aa11.44□□□□□ -0.58
COL12A1-203ENST00000416123 NBPF10Q6P3W6 841 aaKnown RBP11.44□□□□□ -0.58
COL12A1-203ENST00000416123 DGKHQ86XP1 1220 aa11.44□□□□□ -0.58
COL12A1-203ENST00000416123 NBPF15Q8N660 670 aa11.44□□□□□ -0.58
COL12A1-203ENST00000416123 SPATA17Q96L03 361 aa11.44□□□□□ -0.58
COL12A1-203ENST00000416123 MOSPD1Q9UJG1 213 aa11.44□□□□□ -0.58
COL12A1-203ENST00000416123 TSR3Q9UJK0 312 aaKnown RBP11.44□□□□□ -0.58
COL12A1-203ENST00000416123 NOC2LQ9Y3T9 749 aaKnown RBP11.44□□□□□ -0.58
COL12A1-203ENST00000416123 SMAD1Q15797 465 aaKnown RBP11.44□□□□□ -0.58
COL12A1-203ENST00000416123 SLFN12LQ6IEE8 588 aa11.44□□□□□ -0.58
COL12A1-203ENST00000416123 CCNE1P24864 410 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 CLEC10AQ8IUN9 316 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 TDRD7Q8NHU6 1098 aaKnown RBP11.43□□□□□ -0.58
COL12A1-203ENST00000416123 ECEL1O95672 775 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 CDC26Q8NHZ8 85 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 CNOT7Q9UIV1 285 aaKnown RBP11.43□□□□□ -0.58
COL12A1-203ENST00000416123 WDR64B1ANS9 1081 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 AKR1B1P15121 316 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 BBOF1Q8ND07 529 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 POLR3FQ9H1D9 316 aaPredicted RBP11.43□□□□□ -0.58
COL12A1-203ENST00000416123 GOLGA8MH3BSY2 632 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 IKBKBO14920 756 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 CREB3O43889 395 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 PMLP29590 882 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 SOX5P35711 763 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 MSH2P43246 934 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 LRRC63Q05C16 580 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 COASYQ13057 564 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 TMEM270Q6UE05 265 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 MICALL2Q8IY33 904 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 RASSF2P50749 326 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 AP3B2Q13367 1082 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 SP8Q8IXZ3 490 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 RAD54LQ92698 747 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 RAB3IPQ96QF0 476 aaPredicted RBP11.43□□□□□ -0.58
COL12A1-203ENST00000416123 HEY1Q9Y5J3 304 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 NDUFA10O95299 355 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 SERPINB6P35237 376 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 SURF1Q15526 300 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 QRICH1Q2TAL8 776 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 ZNF667Q5HYK9 610 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 RAB44Q7Z6P3 723 aaPredicted RBP11.43□□□□□ -0.58
COL12A1-203ENST00000416123 NSUN6Q8TEA1 469 aaKnown RBP11.43□□□□□ -0.58
COL12A1-203ENST00000416123 LXNQ9BS40 222 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 ADAMTS1Q9UHI8 967 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 EIF3CLB5ME19 914 aaKnown RBP11.43□□□□□ -0.58
COL12A1-203ENST00000416123 TDP2O95551 362 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 MYL1P05976 194 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 PHKA2P46019 1235 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms