RNA–Protein interactions for RNA: ENST00000415670.1

CDC42EP1-202, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-202ENST00000415670 NLRP5P59047 1200 aa18.86■□□□□ 0.61
CDC42EP1-202ENST00000415670 GUCY1B3Q02153 619 aa18.86■□□□□ 0.61
CDC42EP1-202ENST00000415670 SMAD4Q13485 552 aaKnown RBP18.86■□□□□ 0.61
CDC42EP1-202ENST00000415670 LPIN1Q14693 890 aa18.86■□□□□ 0.61
CDC42EP1-202ENST00000415670 FAM26DQ5JW98 314 aa18.86■□□□□ 0.61
CDC42EP1-202ENST00000415670 TRIM67Q6ZTA4 783 aa18.86■□□□□ 0.61
CDC42EP1-202ENST00000415670 RBM23Q86U06 439 aaKnown RBP18.86■□□□□ 0.61
CDC42EP1-202ENST00000415670 LMBR1Q8WVP7 490 aa18.86■□□□□ 0.61
CDC42EP1-202ENST00000415670 LINC01599Q8WXQ3 324 aa18.86■□□□□ 0.61
CDC42EP1-202ENST00000415670 ZNF689Q96CS4 500 aaPredicted RBP18.86■□□□□ 0.61
CDC42EP1-202ENST00000415670 GPR20Q99678 358 aa18.86■□□□□ 0.61
CDC42EP1-202ENST00000415670 ZMYND12Q9H0C1 365 aa18.86■□□□□ 0.61
CDC42EP1-202ENST00000415670 CIZ1Q9ULV3 898 aaPredicted RBP18.86■□□□□ 0.61
CDC42EP1-202ENST00000415670 KCNJ14Q9UNX9 436 aa18.86■□□□□ 0.61
CDC42EP1-202ENST00000415670 MYO15AQ9UKN7 3530 aa18.86■□□□□ 0.61
CDC42EP1-202ENST00000415670 ZDBF2Q9HCK1 2354 aa18.85■□□□□ 0.61
CDC42EP1-202ENST00000415670 GLP2RO95838 553 aa18.85■□□□□ 0.61
CDC42EP1-202ENST00000415670 MMP1P03956 469 aa18.85■□□□□ 0.61
CDC42EP1-202ENST00000415670 GHRHRQ02643 423 aa18.85■□□□□ 0.61
CDC42EP1-202ENST00000415670 NPY5RQ15761 445 aa18.85■□□□□ 0.61
CDC42EP1-202ENST00000415670 GALNT17Q6IS24 598 aa18.85■□□□□ 0.61
CDC42EP1-202ENST00000415670 BARX2Q9UMQ3 279 aaPredicted RBP18.85■□□□□ 0.61
CDC42EP1-202ENST00000415670 MTMR6Q9Y217 621 aa18.85■□□□□ 0.61
CDC42EP1-202ENST00000415670 MRPL42Q9Y6G3 142 aaKnown RBP18.85■□□□□ 0.61
CDC42EP1-202ENST00000415670 KMT2EQ8IZD2 1858 aa18.85■□□□□ 0.61
CDC42EP1-202ENST00000415670 TTC3P53804 2025 aa18.84■□□□□ 0.61
CDC42EP1-202ENST00000415670 ADGRA3Q8IWK6 1321 aa18.84■□□□□ 0.61
CDC42EP1-202ENST00000415670 VPS37CA5D8V6 355 aaPredicted RBP18.84■□□□□ 0.61
CDC42EP1-202ENST00000415670 SMCO2A6NFE2 343 aa18.84■□□□□ 0.61
CDC42EP1-202ENST00000415670 ITGB1P05556 798 aa18.84■□□□□ 0.61
CDC42EP1-202ENST00000415670 CCND2P30279 289 aa18.84■□□□□ 0.61
CDC42EP1-202ENST00000415670 ADCY7P51828 1080 aa18.84■□□□□ 0.61
CDC42EP1-202ENST00000415670 ZXDAP98168 799 aa18.84■□□□□ 0.61
CDC42EP1-202ENST00000415670 MGAT3Q09327 533 aa18.84■□□□□ 0.61
CDC42EP1-202ENST00000415670 DAGLBQ8NCG7 672 aa18.84■□□□□ 0.61
CDC42EP1-202ENST00000415670 SPPL3Q8TCT6 385 aa18.84■□□□□ 0.61
CDC42EP1-202ENST00000415670 CLP1Q92989 425 aaKnown RBP18.84■□□□□ 0.61
CDC42EP1-202ENST00000415670 MAF1Q9H063 256 aa18.84■□□□□ 0.61
CDC42EP1-202ENST00000415670 GLT8D2Q9H1C3 349 aa18.84■□□□□ 0.61
CDC42EP1-202ENST00000415670 EHMT1Q9H9B1 1298 aa18.84■□□□□ 0.61
CDC42EP1-202ENST00000415670 AGO3Q9H9G7 860 aaKnown RBP18.84■□□□□ 0.61
CDC42EP1-202ENST00000415670 C6orf50Q9HD87 102 aa18.84■□□□□ 0.61
CDC42EP1-202ENST00000415670 KAT6AQ92794 2004 aa18.84■□□□□ 0.61
CDC42EP1-202ENST00000415670 RB1P06400 928 aa18.83■□□□□ 0.6
CDC42EP1-202ENST00000415670 GNA11P29992 359 aa18.83■□□□□ 0.6
CDC42EP1-202ENST00000415670 NDUFV1P49821 464 aa18.83■□□□□ 0.6
CDC42EP1-202ENST00000415670 NUCB2P80303 420 aa18.83■□□□□ 0.6
CDC42EP1-202ENST00000415670 PKP1Q13835 747 aa18.83■□□□□ 0.6
CDC42EP1-202ENST00000415670 BTG3Q14201 252 aaPredicted RBP18.83■□□□□ 0.6
CDC42EP1-202ENST00000415670 SAFBQ15424 915 aaKnown RBP eCLIP18.83■□□□□ 0.6
CDC42EP1-202ENST00000415670 PAN2Q504Q3 1202 aaKnown RBP18.83■□□□□ 0.6
CDC42EP1-202ENST00000415670 TEX2Q8IWB9 1127 aa18.83■□□□□ 0.6
CDC42EP1-202ENST00000415670 CUL5Q93034 780 aa18.83■□□□□ 0.6
CDC42EP1-202ENST00000415670 C11orf84Q9BUA3 381 aaPredicted RBP18.83■□□□□ 0.6
CDC42EP1-202ENST00000415670 PSTPIP2Q9H939 334 aa18.83■□□□□ 0.6
CDC42EP1-202ENST00000415670 RIC8AQ9NPQ8 531 aa18.83■□□□□ 0.6
CDC42EP1-202ENST00000415670 PCDHA4Q9UN74 947 aa18.83■□□□□ 0.6
CDC42EP1-202ENST00000415670 LOXHD1Q8IVV2 1947 aa18.82■□□□□ 0.6
CDC42EP1-202ENST00000415670 PLXNA4Q9HCM2 1894 aa18.82■□□□□ 0.6
CDC42EP1-202ENST00000415670 SPATA31C2B4DYI2 1134 aa18.82■□□□□ 0.6
CDC42EP1-202ENST00000415670 LOC730098B7Z3J9 87 aa18.82■□□□□ 0.6
CDC42EP1-202ENST00000415670 NOP56O00567 594 aaKnown RBP18.82■□□□□ 0.6
CDC42EP1-202ENST00000415670 PER2O15055 1255 aa18.82■□□□□ 0.6
CDC42EP1-202ENST00000415670 DGKIO75912 1065 aa18.82■□□□□ 0.6
CDC42EP1-202ENST00000415670 PDGFBP01127 241 aaPredicted RBP18.82■□□□□ 0.6
CDC42EP1-202ENST00000415670 TGFB3P10600 412 aa18.82■□□□□ 0.6
CDC42EP1-202ENST00000415670 KRT2P35908 639 aa18.82■□□□□ 0.6
CDC42EP1-202ENST00000415670 NRIP1P48552 1158 aa18.82■□□□□ 0.6
CDC42EP1-202ENST00000415670 KCNV1Q6PIU1 500 aa18.82■□□□□ 0.6
CDC42EP1-202ENST00000415670 BMP8AQ7Z5Y6 402 aa18.82■□□□□ 0.6
CDC42EP1-202ENST00000415670 DIS3L2Q8IYB7 885 aaKnown RBP18.82■□□□□ 0.6
CDC42EP1-202ENST00000415670 BLIDQ8IZY5 108 aa18.82■□□□□ 0.6
CDC42EP1-202ENST00000415670 SAMD3Q8N6K7 520 aa18.82■□□□□ 0.6
CDC42EP1-202ENST00000415670 KLHL23Q8NBE8 558 aa18.82■□□□□ 0.6
CDC42EP1-202ENST00000415670 VN1R2Q8NFZ6 395 aa18.82■□□□□ 0.6
CDC42EP1-202ENST00000415670 BICD2Q8TD16 824 aa18.82■□□□□ 0.6
CDC42EP1-202ENST00000415670 DNAJB3Q8WWF6 145 aa18.82■□□□□ 0.6
CDC42EP1-202ENST00000415670 BRMS1Q9HCU9 246 aa18.82■□□□□ 0.6
CDC42EP1-202ENST00000415670 DMDP11532 3685 aa18.81■□□□□ 0.6
CDC42EP1-202ENST00000415670 M0R2N6 131 aa18.81■□□□□ 0.6
CDC42EP1-202ENST00000415670 NCK2O43639 380 aa18.81■□□□□ 0.6
CDC42EP1-202ENST00000415670 EYA4O95677 639 aa18.81■□□□□ 0.6
CDC42EP1-202ENST00000415670 BRD1O95696 1058 aa18.81■□□□□ 0.6
CDC42EP1-202ENST00000415670 ZSCAN22P10073 491 aaPredicted RBP18.81■□□□□ 0.6
CDC42EP1-202ENST00000415670 IBSPP21815 317 aaPredicted RBP18.81■□□□□ 0.6
CDC42EP1-202ENST00000415670 MARK3P27448 753 aa18.81■□□□□ 0.6
CDC42EP1-202ENST00000415670 MARCH8Q5T0T0 291 aa18.81■□□□□ 0.6
CDC42EP1-202ENST00000415670 APBB2Q92870 758 aa18.81■□□□□ 0.6
CDC42EP1-202ENST00000415670 RPGRIP1Q96KN7 1286 aa18.81■□□□□ 0.6
CDC42EP1-202ENST00000415670 LMAN2LQ9H0V9 348 aa18.81■□□□□ 0.6
CDC42EP1-202ENST00000415670 FOXP1Q9H334 677 aaPredicted RBP18.81■□□□□ 0.6
CDC42EP1-202ENST00000415670 CHMP5Q9NZZ3 219 aa18.81■□□□□ 0.6
CDC42EP1-202ENST00000415670 USP15Q9Y4E8 981 aaPredicted RBP18.81■□□□□ 0.6
CDC42EP1-202ENST00000415670 VPS13AQ96RL7 3174 aa18.8■□□□□ 0.6
CDC42EP1-202ENST00000415670 BTBD18B2RXH4 712 aa18.8■□□□□ 0.6
CDC42EP1-202ENST00000415670 GCOM1H8Y6P7 765 aaPredicted RBP18.8■□□□□ 0.6
CDC42EP1-202ENST00000415670 PIK3CDO00329 1044 aa18.8■□□□□ 0.6
CDC42EP1-202ENST00000415670 ADAMTS3O15072 1205 aa18.8■□□□□ 0.6
CDC42EP1-202ENST00000415670 ATP9AO75110 1047 aa18.8■□□□□ 0.6
CDC42EP1-202ENST00000415670 POLR2MP0CAP2 368 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms