RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 RASGRP4Q8TDF6 673 aa23.12■■□□□ 1.29
PTPRU-203ENST00000415600 TRAPPC12Q8WVT3 735 aa23.12■■□□□ 1.29
PTPRU-203ENST00000415600 TMX3Q96JJ7 454 aa23.12■■□□□ 1.29
PTPRU-203ENST00000415600 OSBPL7Q9BZF2 842 aa23.12■■□□□ 1.29
PTPRU-203ENST00000415600 PCDHA4Q9UN74 947 aa23.12■■□□□ 1.29
PTPRU-203ENST00000415600 KDM3AQ9Y4C1 1321 aa23.12■■□□□ 1.29
PTPRU-203ENST00000415600 COL4A6Q14031 1691 aa23.11■■□□□ 1.29
PTPRU-203ENST00000415600 IGSF9BQ9UPX0 1349 aa23.11■■□□□ 1.29
PTPRU-203ENST00000415600 PPFIA3O75145 1194 aa23.11■■□□□ 1.29
PTPRU-203ENST00000415600 STAG3L1P0CL83 205 aa23.11■■□□□ 1.29
PTPRU-203ENST00000415600 CD52P31358 61 aa23.11■■□□□ 1.29
PTPRU-203ENST00000415600 MRPL38Q96DV4 380 aaKnown RBP23.11■■□□□ 1.29
PTPRU-203ENST00000415600 SIP14410 1827 aa23.11■■□□□ 1.29
PTPRU-203ENST00000415600 GAS7O60861 476 aa23.1■■□□□ 1.29
PTPRU-203ENST00000415600 RB1P06400 928 aa23.1■■□□□ 1.29
PTPRU-203ENST00000415600 TMEM62Q0P6H9 643 aa23.1■■□□□ 1.29
PTPRU-203ENST00000415600 GPM6BQ13491 265 aa23.1■■□□□ 1.29
PTPRU-203ENST00000415600 CUL4AQ13619 759 aa23.1■■□□□ 1.29
PTPRU-203ENST00000415600 ZNF710Q8N1W2 664 aa23.1■■□□□ 1.29
PTPRU-203ENST00000415600 RIT2Q99578 217 aa23.1■■□□□ 1.29
PTPRU-203ENST00000415600 MAFBQ9Y5Q3 323 aaPredicted RBP23.1■■□□□ 1.29
PTPRU-203ENST00000415600 ADGRA3Q8IWK6 1321 aa23.1■■□□□ 1.29
PTPRU-203ENST00000415600 H3BNC9 293 aa23.1■■□□□ 1.29
PTPRU-203ENST00000415600 MAGEB2O15479 319 aa23.1■■□□□ 1.29
PTPRU-203ENST00000415600 SFNP31947 248 aa23.1■■□□□ 1.29
PTPRU-203ENST00000415600 JAK3P52333 1124 aa23.1■■□□□ 1.29
PTPRU-203ENST00000415600 TFF2Q03403 129 aa23.1■■□□□ 1.29
PTPRU-203ENST00000415600 ANKRD1Q15327 319 aa23.1■■□□□ 1.29
PTPRU-203ENST00000415600 C11orf84Q9BUA3 381 aaPredicted RBP23.1■■□□□ 1.29
PTPRU-203ENST00000415600 FOXD4L1Q9NU39 408 aa23.1■■□□□ 1.29
PTPRU-203ENST00000415600 PADI3Q9ULW8 664 aa23.1■■□□□ 1.29
PTPRU-203ENST00000415600 GINS2Q9Y248 185 aa23.1■■□□□ 1.29
PTPRU-203ENST00000415600 COL4A4P53420 1690 aaPredicted RBP23.09■■□□□ 1.29
PTPRU-203ENST00000415600 TMOD1P28289 359 aa23.09■■□□□ 1.29
PTPRU-203ENST00000415600 BTG3Q14201 252 aaPredicted RBP23.09■■□□□ 1.29
PTPRU-203ENST00000415600 NPAS4Q8IUM7 802 aa23.09■■□□□ 1.29
PTPRU-203ENST00000415600 BLIDQ8IZY5 108 aa23.09■■□□□ 1.29
PTPRU-203ENST00000415600 ZBTB10Q96DT7 871 aa23.09■■□□□ 1.29
PTPRU-203ENST00000415600 TEKT3Q9BXF9 490 aa23.09■■□□□ 1.29
PTPRU-203ENST00000415600 AGO3Q9H9G7 860 aaKnown RBP23.09■■□□□ 1.29
PTPRU-203ENST00000415600 NRBP2Q9NSY0 501 aa23.09■■□□□ 1.29
PTPRU-203ENST00000415600 GABBR1Q9UBS5 961 aa23.09■■□□□ 1.29
PTPRU-203ENST00000415600 CTNNB1P35222 781 aa23.08■■□□□ 1.29
PTPRU-203ENST00000415600 AK2P54819 239 aa23.08■■□□□ 1.29
PTPRU-203ENST00000415600 STK3Q13188 491 aa23.08■■□□□ 1.29
PTPRU-203ENST00000415600 METTL13Q8N6R0 699 aa23.08■■□□□ 1.29
PTPRU-203ENST00000415600 TBCKQ8TEA7 893 aa23.08■■□□□ 1.29
PTPRU-203ENST00000415600 UIMC1Q96RL1 719 aa23.08■■□□□ 1.29
PTPRU-203ENST00000415600 MAP7D2Q96T17 732 aa23.08■■□□□ 1.29
PTPRU-203ENST00000415600 DISC1Q9NRI5 854 aa23.08■■□□□ 1.29
PTPRU-203ENST00000415600 LRFN2Q9ULH4 789 aa23.08■■□□□ 1.29
PTPRU-203ENST00000415600 SPTBN5Q9NRC6 3674 aaKnown RBP23.08■■□□□ 1.28
PTPRU-203ENST00000415600 GPR182O15218 404 aa23.07■■□□□ 1.28
PTPRU-203ENST00000415600 RPS6KA5O75582 802 aa23.07■■□□□ 1.28
PTPRU-203ENST00000415600 BMP1P13497 986 aa23.07■■□□□ 1.28
PTPRU-203ENST00000415600 LRCH2Q5VUJ6 765 aa23.07■■□□□ 1.28
PTPRU-203ENST00000415600 DAGLBQ8NCG7 672 aa23.07■■□□□ 1.28
PTPRU-203ENST00000415600 RDM1Q8NG50 284 aa23.07■■□□□ 1.28
PTPRU-203ENST00000415600 INTS4Q96HW7 963 aaKnown RBP23.07■■□□□ 1.28
PTPRU-203ENST00000415600 NFX1Q12986 1120 aaKnown RBP23.06■■□□□ 1.28
PTPRU-203ENST00000415600 KIAA0319LQ8IZA0 1049 aa23.06■■□□□ 1.28
PTPRU-203ENST00000415600 LENG9Q96B70 501 aa23.06■■□□□ 1.28
PTPRU-203ENST00000415600 PLVAPQ9BX97 442 aa23.06■■□□□ 1.28
PTPRU-203ENST00000415600 LMAN2LQ9H0V9 348 aa23.06■■□□□ 1.28
PTPRU-203ENST00000415600 DENND3A2RUS2 1198 aa23.06■■□□□ 1.28
PTPRU-203ENST00000415600 MSH4O15457 936 aa23.06■■□□□ 1.28
PTPRU-203ENST00000415600 DGKIO75912 1065 aa23.06■■□□□ 1.28
PTPRU-203ENST00000415600 BMPR1AP36894 532 aa23.06■■□□□ 1.28
PTPRU-203ENST00000415600 NONOQ15233 471 aaKnown RBP eCLIP23.06■■□□□ 1.28
PTPRU-203ENST00000415600 Q4G0T1 1027 aa23.06■■□□□ 1.28
PTPRU-203ENST00000415600 MOXD1Q6UVY6 613 aa23.06■■□□□ 1.28
PTPRU-203ENST00000415600 KRT25Q7Z3Z0 450 aa23.06■■□□□ 1.28
PTPRU-203ENST00000415600 CMTR2Q8IYT2 770 aaKnown RBP23.06■■□□□ 1.28
PTPRU-203ENST00000415600 WASF1Q92558 559 aa23.06■■□□□ 1.28
PTPRU-203ENST00000415600 SLC5A5Q92911 643 aa23.06■■□□□ 1.28
PTPRU-203ENST00000415600 C1orf112Q9NSG2 853 aa23.06■■□□□ 1.28
PTPRU-203ENST00000415600 TTC3P53804 2025 aa23.05■■□□□ 1.28
PTPRU-203ENST00000415600 C5orf67F2Z3F1 127 aa23.05■■□□□ 1.28
PTPRU-203ENST00000415600 ADAMTS3O15072 1205 aa23.05■■□□□ 1.28
PTPRU-203ENST00000415600 NCK2O43639 380 aa23.05■■□□□ 1.28
PTPRU-203ENST00000415600 C22orf31O95567 290 aa23.05■■□□□ 1.28
PTPRU-203ENST00000415600 KCNQ1P51787 676 aa23.05■■□□□ 1.28
PTPRU-203ENST00000415600 CRYBB1P53674 252 aaPredicted RBP23.05■■□□□ 1.28
PTPRU-203ENST00000415600 TRMT1LQ7Z2T5 733 aaKnown RBP23.05■■□□□ 1.28
PTPRU-203ENST00000415600 BANK1Q8NDB2 785 aa23.05■■□□□ 1.28
PTPRU-203ENST00000415600 CLP1Q92989 425 aaKnown RBP23.05■■□□□ 1.28
PTPRU-203ENST00000415600 UBE2ZQ9H832 354 aaPredicted RBP23.05■■□□□ 1.28
PTPRU-203ENST00000415600 LIMCH1Q9UPQ0 1083 aa23.05■■□□□ 1.28
PTPRU-203ENST00000415600 MYH9P35579 1960 aaKnown RBP23.05■■□□□ 1.28
PTPRU-203ENST00000415600 CYP3A7-CYP3A51PA0A087WV96 503 aa23.04■■□□□ 1.28
PTPRU-203ENST00000415600 CCDC194A0A1B0GVG4 234 aa23.04■■□□□ 1.28
PTPRU-203ENST00000415600 CHMP2AO43633 222 aa23.04■■□□□ 1.28
PTPRU-203ENST00000415600 ATP4AP20648 1035 aa23.04■■□□□ 1.28
PTPRU-203ENST00000415600 CYP3A7P24462 503 aa23.04■■□□□ 1.28
PTPRU-203ENST00000415600 ZNF689Q96CS4 500 aaPredicted RBP23.04■■□□□ 1.28
PTPRU-203ENST00000415600 LARP6Q9BRS8 491 aaKnown RBP23.04■■□□□ 1.28
PTPRU-203ENST00000415600 NSUN3Q9H649 340 aaKnown RBP23.04■■□□□ 1.28
PTPRU-203ENST00000415600 PCDHB7Q9Y5E2 793 aa23.04■■□□□ 1.28
PTPRU-203ENST00000415600 STK36Q9NRP7 1315 aa23.03■■□□□ 1.28
PTPRU-203ENST00000415600 ZBTB42B2RXF5 422 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms