RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 RB1P06400 928 aa7.18□□□□□ -1.26
USP54-202ENST00000413442 RFC5P40937 340 aa7.18□□□□□ -1.26
USP54-202ENST00000413442 WDR5P61964 334 aaKnown RBP7.18□□□□□ -1.26
USP54-202ENST00000413442 HTRA4P83105 476 aaPredicted RBP7.18□□□□□ -1.26
USP54-202ENST00000413442 ZNF200P98182 395 aaPredicted RBP7.18□□□□□ -1.26
USP54-202ENST00000413442 MGAT3Q09327 533 aa7.18□□□□□ -1.26
USP54-202ENST00000413442 TBC1D8BQ0IIM8 1120 aa7.18□□□□□ -1.26
USP54-202ENST00000413442 MKRN4PQ13434 485 aaPredicted RBP7.18□□□□□ -1.26
USP54-202ENST00000413442 GNL2Q13823 731 aaKnown RBP7.18□□□□□ -1.26
USP54-202ENST00000413442 TARBP2Q15633 366 aaKnown RBP7.18□□□□□ -1.26
USP54-202ENST00000413442 NAALADL2Q58DX5 795 aa7.18□□□□□ -1.26
USP54-202ENST00000413442 RILPL1Q5EBL4 403 aa7.18□□□□□ -1.26
USP54-202ENST00000413442 FBXO47Q5MNV8 452 aa7.18□□□□□ -1.26
USP54-202ENST00000413442 PIK3AP1Q6ZUJ8 805 aa7.18□□□□□ -1.26
USP54-202ENST00000413442 ZNF410Q86VK4 478 aa7.18□□□□□ -1.26
USP54-202ENST00000413442 CCDC60Q8IWA6 550 aaPredicted RBP7.18□□□□□ -1.26
USP54-202ENST00000413442 KIAA0319LQ8IZA0 1049 aa7.18□□□□□ -1.26
USP54-202ENST00000413442 NECAB1Q8N987 351 aa7.18□□□□□ -1.26
USP54-202ENST00000413442 RASGRP4Q8TDF6 673 aa7.18□□□□□ -1.26
USP54-202ENST00000413442 DNAJB3Q8WWF6 145 aa7.18□□□□□ -1.26
USP54-202ENST00000413442 TCP11Q8WWU5 503 aa7.18□□□□□ -1.26
USP54-202ENST00000413442 INTS4Q96HW7 963 aaKnown RBP7.18□□□□□ -1.26
USP54-202ENST00000413442 LARP6Q9BRS8 491 aaKnown RBP7.18□□□□□ -1.26
USP54-202ENST00000413442 BACH2Q9BYV9 841 aa7.18□□□□□ -1.26
USP54-202ENST00000413442 TSPYL2Q9H2G4 693 aaPredicted RBP7.18□□□□□ -1.26
USP54-202ENST00000413442 ELAC1Q9H777 363 aaKnown RBP7.18□□□□□ -1.26
USP54-202ENST00000413442 CHST12Q9NRB3 414 aa7.18□□□□□ -1.26
USP54-202ENST00000413442 ANKEF1Q9NU02 776 aa7.18□□□□□ -1.26
USP54-202ENST00000413442 PKD2L1Q9P0L9 805 aa7.18□□□□□ -1.26
USP54-202ENST00000413442 CXXC1Q9P0U4 656 aaPredicted RBP7.18□□□□□ -1.26
USP54-202ENST00000413442 MICAL3Q7RTP6 2002 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 COL4A6Q14031 1691 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 IGKV6-21A0A0C4DH24 114 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 ENPP3O14638 875 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 HOXA2O43364 376 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 SORBS3O60504 671 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 NEMFO60524 1076 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 MAFO75444 373 aaPredicted RBP7.17□□□□□ -1.26
USP54-202ENST00000413442 TDP2O95551 362 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 EOMESO95936 686 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 BMP15O95972 392 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 ZSCAN20P17040 1043 aaPredicted RBP7.17□□□□□ -1.26
USP54-202ENST00000413442 ATP4AP20648 1035 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 KCNA4P22459 653 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 MARK3P27448 753 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 PRPHP41219 470 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 NCBP1Q09161 790 aaKnown RBP7.17□□□□□ -1.26
USP54-202ENST00000413442 HIC1Q14526 733 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 MXD4Q14582 209 aaPredicted RBP7.17□□□□□ -1.26
USP54-202ENST00000413442 CALCRLQ16602 461 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 CSPP1Q1MSJ5 1256 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 TMEM266Q2M3C6 531 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 EFCAB12Q6NXP0 572 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 TRIM50Q86XT4 487 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 NOSTRINQ8IVI9 506 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 CCDC83Q8IWF9 413 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 TET1Q8NFU7 2136 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 ERMNQ8TAM6 284 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 SLC7A3Q8WY07 619 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 HAS1Q92839 578 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 AIFM3Q96NN9 605 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 MTMR9Q96QG7 549 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 TGS1Q96RS0 853 aaKnown RBP7.17□□□□□ -1.26
USP54-202ENST00000413442 CDX2Q99626 313 aaPredicted RBP7.17□□□□□ -1.26
USP54-202ENST00000413442 HSD17B14Q9BPX1 270 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 TRAIPQ9BWF2 469 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 UNC45AQ9H3U1 944 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 TTC12Q9H892 705 aaPredicted RBP7.17□□□□□ -1.26
USP54-202ENST00000413442 TUFT1Q9NNX1 390 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 DACT1Q9NYF0 836 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 STK39Q9UEW8 545 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 CDY2AQ9Y6F7 541 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 LOXHD1Q8IVV2 1947 aa7.17□□□□□ -1.26
USP54-202ENST00000413442 GBF1Q92538 1859 aa7.16□□□□□ -1.26
USP54-202ENST00000413442 FSD2A1L4K1 749 aa7.16□□□□□ -1.26
USP54-202ENST00000413442 DDX11L8A8MPP1 907 aa7.16□□□□□ -1.26
USP54-202ENST00000413442 ZBTB42B2RXF5 422 aa7.16□□□□□ -1.26
USP54-202ENST00000413442 DDX39AO00148 427 aaKnown RBP7.16□□□□□ -1.26
USP54-202ENST00000413442 NCK2O43639 380 aa7.16□□□□□ -1.26
USP54-202ENST00000413442 GTPBP6O43824 516 aaPredicted RBP7.16□□□□□ -1.26
USP54-202ENST00000413442 RPS6KA5O75582 802 aa7.16□□□□□ -1.26
USP54-202ENST00000413442 C22orf31O95567 290 aa7.16□□□□□ -1.26
USP54-202ENST00000413442 SCP2P22307 547 aa7.16□□□□□ -1.26
USP54-202ENST00000413442 EIF4BP23588 611 aaKnown RBP7.16□□□□□ -1.26
USP54-202ENST00000413442 AXLP30530 894 aa7.16□□□□□ -1.26
USP54-202ENST00000413442 ERVK-21P61565 698 aa7.16□□□□□ -1.26
USP54-202ENST00000413442 IGBP1P78318 339 aa7.16□□□□□ -1.26
USP54-202ENST00000413442 FAM189BP81408 668 aa7.16□□□□□ -1.26
USP54-202ENST00000413442 PAK2Q13177 524 aa7.16□□□□□ -1.26
USP54-202ENST00000413442 NR5A1Q13285 461 aa7.16□□□□□ -1.26
USP54-202ENST00000413442 LPIN1Q14693 890 aa7.16□□□□□ -1.26
USP54-202ENST00000413442 MBTPS1Q14703 1052 aa7.16□□□□□ -1.26
USP54-202ENST00000413442 AAK1Q2M2I8 961 aa7.16□□□□□ -1.26
USP54-202ENST00000413442 PPP2R2DQ66LE6 453 aa7.16□□□□□ -1.26
USP54-202ENST00000413442 ARL6IP4Q66PJ3 421 aaKnown RBP7.16□□□□□ -1.26
USP54-202ENST00000413442 HAUS3Q68CZ6 603 aa7.16□□□□□ -1.26
USP54-202ENST00000413442 SLC24A5Q71RS6 500 aa7.16□□□□□ -1.26
USP54-202ENST00000413442 NPAS4Q8IUM7 802 aa7.16□□□□□ -1.26
USP54-202ENST00000413442 LINC01465Q8N7H1 131 aa7.16□□□□□ -1.26
USP54-202ENST00000413442 CNNM3Q8NE01 707 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms