RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 CYP2C9P11712 490 aa19.1■□□□□ 0.65
PTPRC-206ENST00000413409 SSTR3P32745 418 aaPredicted RBP19.1■□□□□ 0.65
PTPRC-206ENST00000413409 TNFAIP2Q03169 654 aa19.1■□□□□ 0.65
PTPRC-206ENST00000413409 AP3B2Q13367 1082 aa19.1■□□□□ 0.65
PTPRC-206ENST00000413409 CUL4BQ13620 913 aa19.1■□□□□ 0.65
PTPRC-206ENST00000413409 NOLC1Q14978 699 aaKnown RBP eCLIP19.1■□□□□ 0.65
PTPRC-206ENST00000413409 KARSQ15046 597 aaKnown RBP19.1■□□□□ 0.65
PTPRC-206ENST00000413409 LEXMQ3ZCV2 418 aa19.1■□□□□ 0.65
PTPRC-206ENST00000413409 NAALADL2Q58DX5 795 aa19.1■□□□□ 0.65
PTPRC-206ENST00000413409 SYDE2Q5VT97 1194 aa19.1■□□□□ 0.65
PTPRC-206ENST00000413409 RRAGBQ5VZM2 374 aa19.1■□□□□ 0.65
PTPRC-206ENST00000413409 POTEBQ6S5H4 581 aa19.1■□□□□ 0.65
PTPRC-206ENST00000413409 CABP7Q86V35 215 aa19.1■□□□□ 0.65
PTPRC-206ENST00000413409 IGSF22Q8N9C0 903 aa19.1■□□□□ 0.65
PTPRC-206ENST00000413409 GDPD5Q8WTR4 605 aa19.1■□□□□ 0.65
PTPRC-206ENST00000413409 SLC9A7Q96T83 725 aa19.1■□□□□ 0.65
PTPRC-206ENST00000413409 COL4A4P53420 1690 aaPredicted RBP19.1■□□□□ 0.65
PTPRC-206ENST00000413409 LCHNA4D1U4 455 aa19.09■□□□□ 0.65
PTPRC-206ENST00000413409 PFKMP08237 780 aa19.09■□□□□ 0.65
PTPRC-206ENST00000413409 BMP3P12645 472 aa19.09■□□□□ 0.65
PTPRC-206ENST00000413409 ATP1A3P13637 1013 aa19.09■□□□□ 0.65
PTPRC-206ENST00000413409 KCNB1Q14721 858 aa19.09■□□□□ 0.65
PTPRC-206ENST00000413409 CALCRLQ16602 461 aa19.09■□□□□ 0.65
PTPRC-206ENST00000413409 FSCN1Q16658 493 aaKnown RBP19.09■□□□□ 0.65
PTPRC-206ENST00000413409 TMEM266Q2M3C6 531 aa19.09■□□□□ 0.65
PTPRC-206ENST00000413409 TMEM63BQ5T3F8 832 aa19.09■□□□□ 0.65
PTPRC-206ENST00000413409 PHOSPHO2Q8TCD6 241 aa19.09■□□□□ 0.65
PTPRC-206ENST00000413409 CACTINQ8WUQ7 758 aaKnown RBP19.09■□□□□ 0.65
PTPRC-206ENST00000413409 NUP88Q99567 741 aaPredicted RBP19.09■□□□□ 0.65
PTPRC-206ENST00000413409 MTRQ99707 1265 aa19.09■□□□□ 0.65
PTPRC-206ENST00000413409 GTPBP4Q9BZE4 634 aaKnown RBP19.09■□□□□ 0.65
PTPRC-206ENST00000413409 RAB34Q9BZG1 259 aa19.09■□□□□ 0.65
PTPRC-206ENST00000413409 PSTPIP2Q9H939 334 aa19.09■□□□□ 0.65
PTPRC-206ENST00000413409 TRMT13Q9NUP7 481 aaKnown RBP19.09■□□□□ 0.65
PTPRC-206ENST00000413409 KBTBD4Q9NVX7 518 aa19.09■□□□□ 0.65
PTPRC-206ENST00000413409 NFE2L3Q9Y4A8 694 aa19.09■□□□□ 0.65
PTPRC-206ENST00000413409 TERF1P54274 439 aa19.08■□□□□ 0.65
PTPRC-206ENST00000413409 TRAF1Q13077 416 aa19.08■□□□□ 0.65
PTPRC-206ENST00000413409 SPATA1Q5VX52 437 aa19.08■□□□□ 0.65
PTPRC-206ENST00000413409 MOXD1Q6UVY6 613 aa19.08■□□□□ 0.65
PTPRC-206ENST00000413409 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.08■□□□□ 0.65
PTPRC-206ENST00000413409 LRRC8AQ8IWT6 810 aa19.08■□□□□ 0.65
PTPRC-206ENST00000413409 RASSF8Q8NHQ8 419 aa19.08■□□□□ 0.65
PTPRC-206ENST00000413409 AMNQ9BXJ7 453 aa19.08■□□□□ 0.65
PTPRC-206ENST00000413409 FANCLQ9NW38 375 aa19.08■□□□□ 0.65
PTPRC-206ENST00000413409 LMCD1Q9NZU5 365 aa19.08■□□□□ 0.65
PTPRC-206ENST00000413409 PPP1R3GB7ZBB8 358 aa19.07■□□□□ 0.64
PTPRC-206ENST00000413409 SLC26A4O43511 780 aa19.07■□□□□ 0.64
PTPRC-206ENST00000413409 SERPINC1P01008 464 aa19.07■□□□□ 0.64
PTPRC-206ENST00000413409 RPN1P04843 607 aaKnown RBP19.07■□□□□ 0.64
PTPRC-206ENST00000413409 KCNA5P22460 613 aa19.07■□□□□ 0.64
PTPRC-206ENST00000413409 UBASH3AP57075 661 aa19.07■□□□□ 0.64
PTPRC-206ENST00000413409 CNTN2Q02246 1040 aa19.07■□□□□ 0.64
PTPRC-206ENST00000413409 UBE2SQ16763 222 aa19.07■□□□□ 0.64
PTPRC-206ENST00000413409 ZNF658Q5TYW1 1059 aaPredicted RBP19.07■□□□□ 0.64
PTPRC-206ENST00000413409 TLK2Q86UE8 772 aa19.07■□□□□ 0.64
PTPRC-206ENST00000413409 SLF1Q9BQI6 1058 aa19.07■□□□□ 0.64
PTPRC-206ENST00000413409 SEZ6LQ9BYH1 1024 aa19.07■□□□□ 0.64
PTPRC-206ENST00000413409 GOPCQ9HD26 462 aa19.07■□□□□ 0.64
PTPRC-206ENST00000413409 MYH7BA7E2Y1 1941 aa19.06■□□□□ 0.64
PTPRC-206ENST00000413409 PP2D1A8MPX8 630 aa19.06■□□□□ 0.64
PTPRC-206ENST00000413409 DYNC1LI2O43237 492 aaPredicted RBP19.06■□□□□ 0.64
PTPRC-206ENST00000413409 DCXO43602 365 aa19.06■□□□□ 0.64
PTPRC-206ENST00000413409 EDIL3O43854 480 aa19.06■□□□□ 0.64
PTPRC-206ENST00000413409 RAD21O60216 631 aa19.06■□□□□ 0.64
PTPRC-206ENST00000413409 TDP2O95551 362 aa19.06■□□□□ 0.64
PTPRC-206ENST00000413409 SMPD1P17405 629 aa19.06■□□□□ 0.64
PTPRC-206ENST00000413409 PLCG1P19174 1290 aa19.06■□□□□ 0.64
PTPRC-206ENST00000413409 LRMPQ12912 555 aa19.06■□□□□ 0.64
PTPRC-206ENST00000413409 PDIA5Q14554 519 aa19.06■□□□□ 0.64
PTPRC-206ENST00000413409 HFE2Q6ZVN8 426 aa19.06■□□□□ 0.64
PTPRC-206ENST00000413409 TMC6Q7Z403 805 aa19.06■□□□□ 0.64
PTPRC-206ENST00000413409 CPXCR1Q8N123 301 aa19.06■□□□□ 0.64
PTPRC-206ENST00000413409 STK17AQ9UEE5 414 aa19.06■□□□□ 0.64
PTPRC-206ENST00000413409 PCDHA1Q9Y5I3 950 aa19.06■□□□□ 0.64
PTPRC-206ENST00000413409 ZDBF2Q9HCK1 2354 aa19.06■□□□□ 0.64
PTPRC-206ENST00000413409 TET1Q8NFU7 2136 aa19.06■□□□□ 0.64
PTPRC-206ENST00000413409 GRXCR2A6NFK2 248 aa19.05■□□□□ 0.64
PTPRC-206ENST00000413409 ATP2A1O14983 1001 aa19.05■□□□□ 0.64
PTPRC-206ENST00000413409 SLC37A4O43826 429 aa19.05■□□□□ 0.64
PTPRC-206ENST00000413409 PLA2G6O60733 806 aa19.05■□□□□ 0.64
PTPRC-206ENST00000413409 ACTN1P12814 892 aa19.05■□□□□ 0.64
PTPRC-206ENST00000413409 CD44P16070 742 aaKnown RBP19.05■□□□□ 0.64
PTPRC-206ENST00000413409 CASP1P29466 404 aa19.05■□□□□ 0.64
PTPRC-206ENST00000413409 PTCRAQ6ISU1 281 aaPredicted RBP19.05■□□□□ 0.64
PTPRC-206ENST00000413409 TMCO2Q7Z6W1 182 aaPredicted RBP19.05■□□□□ 0.64
PTPRC-206ENST00000413409 FILIP1Q7Z7B0 1213 aa19.05■□□□□ 0.64
PTPRC-206ENST00000413409 FBXO11Q86XK2 927 aa19.05■□□□□ 0.64
PTPRC-206ENST00000413409 VSTM4Q8IW00 320 aa19.05■□□□□ 0.64
PTPRC-206ENST00000413409 ANKRD35Q8N283 1001 aa19.05■□□□□ 0.64
PTPRC-206ENST00000413409 CALML4Q96GE6 196 aa19.05■□□□□ 0.64
PTPRC-206ENST00000413409 MBOAT7Q96N66 472 aa19.05■□□□□ 0.64
PTPRC-206ENST00000413409 MED15Q96RN5 788 aa19.05■□□□□ 0.64
PTPRC-206ENST00000413409 ANO3Q9BYT9 981 aa19.05■□□□□ 0.64
PTPRC-206ENST00000413409 BLZF1Q9H2G9 400 aa19.05■□□□□ 0.64
PTPRC-206ENST00000413409 RAVER2Q9HCJ3 691 aaKnown RBP19.05■□□□□ 0.64
PTPRC-206ENST00000413409 PDGFCQ9NRA1 345 aa19.05■□□□□ 0.64
PTPRC-206ENST00000413409 CYP3A7-CYP3A51PA0A087WV96 503 aa19.04■□□□□ 0.64
PTPRC-206ENST00000413409 TMEM232C9JQI7 657 aa19.04■□□□□ 0.64
PTPRC-206ENST00000413409 FOSP01100 380 aaPredicted RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms