RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 SEPT9Q9UHD8 586 aaPredicted RBP20.78■□□□□ 0.92
CDC42-204ENST00000411827 SERTAD1Q9UHV2 236 aa20.78■□□□□ 0.92
CDC42-204ENST00000411827 TRPC6Q9Y210 931 aa20.78■□□□□ 0.92
CDC42-204ENST00000411827 TELO2Q9Y4R8 837 aa20.78■□□□□ 0.92
CDC42-204ENST00000411827 NRCAMQ92823 1304 aa20.78■□□□□ 0.92
CDC42-204ENST00000411827 DOCK5Q9H7D0 1870 aa20.77■□□□□ 0.92
CDC42-204ENST00000411827 E9PMD0 336 aa20.77■□□□□ 0.92
CDC42-204ENST00000411827 MAGEB2O15479 319 aa20.77■□□□□ 0.92
CDC42-204ENST00000411827 TRAK2O60296 914 aa20.77■□□□□ 0.92
CDC42-204ENST00000411827 LETM1O95202 739 aaPredicted RBP20.77■□□□□ 0.92
CDC42-204ENST00000411827 STBD1O95210 358 aa20.77■□□□□ 0.92
CDC42-204ENST00000411827 RPLP2P05387 115 aaKnown RBP20.77■□□□□ 0.92
CDC42-204ENST00000411827 ASGR1P07306 291 aa20.77■□□□□ 0.92
CDC42-204ENST00000411827 ATP4AP20648 1035 aa20.77■□□□□ 0.92
CDC42-204ENST00000411827 PSEN2P49810 448 aa20.77■□□□□ 0.92
CDC42-204ENST00000411827 ACLYP53396 1101 aa20.77■□□□□ 0.92
CDC42-204ENST00000411827 SLC12A3P55017 1021 aa20.77■□□□□ 0.92
CDC42-204ENST00000411827 BEX3Q00994 111 aa20.77■□□□□ 0.92
CDC42-204ENST00000411827 PTPN11Q06124 597 aaPredicted RBP20.77■□□□□ 0.92
CDC42-204ENST00000411827 MFSD10Q14728 455 aa20.77■□□□□ 0.92
CDC42-204ENST00000411827 MTFR1Q15390 333 aa20.77■□□□□ 0.92
CDC42-204ENST00000411827 XKR9Q5GH70 373 aa20.77■□□□□ 0.92
CDC42-204ENST00000411827 MCPH1Q8NEM0 835 aa20.77■□□□□ 0.92
CDC42-204ENST00000411827 PIGOQ8TEQ8 1089 aa20.77■□□□□ 0.92
CDC42-204ENST00000411827 CEP170P1Q96L14 293 aa20.77■□□□□ 0.92
CDC42-204ENST00000411827 GLT1D1Q96MS3 346 aa20.77■□□□□ 0.92
CDC42-204ENST00000411827 PLIN2Q99541 437 aa20.77■□□□□ 0.92
CDC42-204ENST00000411827 NUP62CLQ9H1M0 184 aa20.77■□□□□ 0.92
CDC42-204ENST00000411827 CLSTN2Q9H4D0 955 aa20.77■□□□□ 0.92
CDC42-204ENST00000411827 MYH9P35579 1960 aaKnown RBP20.77■□□□□ 0.92
CDC42-204ENST00000411827 SMC2O95347 1197 aa20.76■□□□□ 0.91
CDC42-204ENST00000411827 ZNF286BP0CG31 522 aa20.76■□□□□ 0.91
CDC42-204ENST00000411827 GUCY2CP25092 1073 aa20.76■□□□□ 0.91
CDC42-204ENST00000411827 PSMC6P62333 389 aa20.76■□□□□ 0.91
CDC42-204ENST00000411827 TARBP2Q15633 366 aaKnown RBP20.76■□□□□ 0.91
CDC42-204ENST00000411827 KIAA0753Q2KHM9 967 aa20.76■□□□□ 0.91
CDC42-204ENST00000411827 NFRKBQ6P4R8 1299 aa20.76■□□□□ 0.91
CDC42-204ENST00000411827 SH3RF1Q7Z6J0 888 aa20.76■□□□□ 0.91
CDC42-204ENST00000411827 SESTD1Q86VW0 696 aa20.76■□□□□ 0.91
CDC42-204ENST00000411827 TRIM50Q86XT4 487 aa20.76■□□□□ 0.91
CDC42-204ENST00000411827 ZNF710Q8N1W2 664 aa20.76■□□□□ 0.91
CDC42-204ENST00000411827 SLC7A3Q8WY07 619 aa20.76■□□□□ 0.91
CDC42-204ENST00000411827 KAT2BQ92831 832 aa20.76■□□□□ 0.91
CDC42-204ENST00000411827 CCDC47Q96A33 483 aaKnown RBP20.76■□□□□ 0.91
CDC42-204ENST00000411827 PAGE5Q96GU1 130 aa20.76■□□□□ 0.91
CDC42-204ENST00000411827 C7orf25Q9BPX7 421 aa20.76■□□□□ 0.91
CDC42-204ENST00000411827 ANP32EQ9BTT0 268 aa20.76■□□□□ 0.91
CDC42-204ENST00000411827 PHF24Q9UPV7 400 aa20.76■□□□□ 0.91
CDC42-204ENST00000411827 GTPBP6O43824 516 aaPredicted RBP20.75■□□□□ 0.91
CDC42-204ENST00000411827 SSBP05455 408 aaKnown RBP eCLIP20.75■□□□□ 0.91
CDC42-204ENST00000411827 PTGS1P23219 599 aa20.75■□□□□ 0.91
CDC42-204ENST00000411827 GJA8P48165 433 aa20.75■□□□□ 0.91
CDC42-204ENST00000411827 MCM6Q14566 821 aa20.75■□□□□ 0.91
CDC42-204ENST00000411827 POSTNQ15063 836 aa20.75■□□□□ 0.91
CDC42-204ENST00000411827 CCDC183Q5T5S1 534 aa20.75■□□□□ 0.91
CDC42-204ENST00000411827 PADI6Q6TGC4 694 aa20.75■□□□□ 0.91
CDC42-204ENST00000411827 KCNK18Q7Z418 384 aa20.75■□□□□ 0.91
CDC42-204ENST00000411827 C7orf31Q8N865 590 aa20.75■□□□□ 0.91
CDC42-204ENST00000411827 RETREG2Q8NC44 543 aa20.75■□□□□ 0.91
CDC42-204ENST00000411827 U2AF1L4Q8WU68 220 aaKnown RBP20.75■□□□□ 0.91
CDC42-204ENST00000411827 RNPEPQ9H4A4 650 aa20.75■□□□□ 0.91
CDC42-204ENST00000411827 ODF2LQ9ULJ1 636 aa20.75■□□□□ 0.91
CDC42-204ENST00000411827 PVALEFA0A1B0GWK0 134 aa20.74■□□□□ 0.91
CDC42-204ENST00000411827 MYADML2A6NDP7 307 aa20.74■□□□□ 0.91
CDC42-204ENST00000411827 TFRCP02786 760 aaKnown RBP20.74■□□□□ 0.91
CDC42-204ENST00000411827 CYP11B2P19099 503 aa20.74■□□□□ 0.91
CDC42-204ENST00000411827 SCP2P22307 547 aa20.74■□□□□ 0.91
CDC42-204ENST00000411827 MARK3P27448 753 aa20.74■□□□□ 0.91
CDC42-204ENST00000411827 TBC1D8BQ0IIM8 1120 aa20.74■□□□□ 0.91
CDC42-204ENST00000411827 PPFIA1Q13136 1202 aa20.74■□□□□ 0.91
CDC42-204ENST00000411827 RINT1Q6NUQ1 792 aa20.74■□□□□ 0.91
CDC42-204ENST00000411827 CXCL17Q6UXB2 119 aa20.74■□□□□ 0.91
CDC42-204ENST00000411827 GPBP1Q86WP2 473 aa20.74■□□□□ 0.91
CDC42-204ENST00000411827 TCP11Q8WWU5 503 aa20.74■□□□□ 0.91
CDC42-204ENST00000411827 C17orf75Q9HAS0 396 aa20.74■□□□□ 0.91
CDC42-204ENST00000411827 MAFO75444 373 aaPredicted RBP20.73■□□□□ 0.91
CDC42-204ENST00000411827 KRT18P05783 430 aaKnown RBP20.73■□□□□ 0.91
CDC42-204ENST00000411827 INSRRP14616 1297 aa20.73■□□□□ 0.91
CDC42-204ENST00000411827 DNM2P50570 870 aa20.73■□□□□ 0.91
CDC42-204ENST00000411827 POLGP54098 1239 aaPredicted RBP20.73■□□□□ 0.91
CDC42-204ENST00000411827 CDC42EP1Q00587 391 aa20.73■□□□□ 0.91
CDC42-204ENST00000411827 MDM2Q00987 491 aaPredicted RBP20.73■□□□□ 0.91
CDC42-204ENST00000411827 C1orf186Q6ZWK4 172 aa20.73■□□□□ 0.91
CDC42-204ENST00000411827 KIFAP3Q92845 792 aa20.73■□□□□ 0.91
CDC42-204ENST00000411827 DRC1Q96MC2 740 aa20.73■□□□□ 0.91
CDC42-204ENST00000411827 GSDMAQ96QA5 445 aa20.73■□□□□ 0.91
CDC42-204ENST00000411827 TRIM9Q9C026 710 aa20.73■□□□□ 0.91
CDC42-204ENST00000411827 DHX33Q9H6R0 707 aaKnown RBP20.73■□□□□ 0.91
CDC42-204ENST00000411827 ATP6V0A4Q9HBG4 840 aa20.73■□□□□ 0.91
CDC42-204ENST00000411827 RMND1Q9NWS8 449 aa20.73■□□□□ 0.91
CDC42-204ENST00000411827 CCDC85CA6NKD9 419 aa20.72■□□□□ 0.91
CDC42-204ENST00000411827 MYCNP04198 464 aaPredicted RBP20.72■□□□□ 0.91
CDC42-204ENST00000411827 SMIM10L2AP0DMW4 78 aa20.72■□□□□ 0.91
CDC42-204ENST00000411827 SMIM10L2BP0DMW5 78 aa20.72■□□□□ 0.91
CDC42-204ENST00000411827 TMOD1P28289 359 aa20.72■□□□□ 0.91
CDC42-204ENST00000411827 RTP1P59025 263 aa20.72■□□□□ 0.91
CDC42-204ENST00000411827 GRIK4Q16099 956 aa20.72■□□□□ 0.91
CDC42-204ENST00000411827 MTERF2Q49AM1 385 aa20.72■□□□□ 0.91
CDC42-204ENST00000411827 CCDC65Q8IXS2 484 aa20.72■□□□□ 0.91
CDC42-204ENST00000411827 SLC17A8Q8NDX2 589 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 174.1 ms