RNA–Protein interactions for RNA: ENST00000409938.5

EPHA4-203, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EPHA4, Length 3,363 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-203ENST00000409938 DDR1Q08345 913 aa8.56□□□□□ -1.04
EPHA4-203ENST00000409938 BYSLQ13895 437 aaKnown RBP8.56□□□□□ -1.04
EPHA4-203ENST00000409938 TCEAL1Q15170 157 aa8.56□□□□□ -1.04
EPHA4-203ENST00000409938 ALKBH5Q6P6C2 394 aaKnown RBP8.56□□□□□ -1.04
EPHA4-203ENST00000409938 TMC3Q7Z5M5 1100 aa8.56□□□□□ -1.04
EPHA4-203ENST00000409938 LNX1Q8TBB1 728 aaPredicted RBP8.56□□□□□ -1.04
EPHA4-203ENST00000409938 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.56□□□□□ -1.04
EPHA4-203ENST00000409938 EPB41L4BQ9H329 900 aa8.56□□□□□ -1.04
EPHA4-203ENST00000409938 OLFML3Q9NRN5 406 aa8.56□□□□□ -1.04
EPHA4-203ENST00000409938 TYW1Q9NV66 732 aaKnown RBP8.56□□□□□ -1.04
EPHA4-203ENST00000409938 ARMCX3Q9UH62 379 aaPredicted RBP8.56□□□□□ -1.04
EPHA4-203ENST00000409938 USP17L15C9J2P7 530 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 USP17L13C9JLJ4 530 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 USP17L11C9JVI0 530 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 USP17L18D6R9N7 530 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 USP17L22D6RA61 530 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 USP17L17D6RBQ6 530 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 USP17L19D6RCP7 530 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 USP17L20D6RJB6 530 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 TGFB1I1O43294 461 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 SLC16A2P36021 539 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 USP17L24Q0WX57 530 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 EXOC3L4Q17RC7 722 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 QRICH1Q2TAL8 776 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 DCAF12L1Q5VU92 463 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 USP17L6PQ6QN14 398 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 SIAH1Q8IUQ4 282 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 STK24Q9Y6E0 443 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 PPFIA2O75334 1257 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 ADRA2BP18089 450 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 SREBF1P36956 1147 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 HDLBPQ00341 1268 aaKnown RBP8.55□□□□□ -1.04
EPHA4-203ENST00000409938 DRP2Q13474 957 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 MCTP2Q6DN12 878 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 SFR1Q86XK3 245 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 KLHL7Q8IXQ5 586 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 DCAF4Q8WV16 495 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 TLCD1Q96CP7 247 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 CRAMP1Q96RY5 1269 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 FIZ1Q96SL8 496 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 POLR3CQ9BUI4 534 aaPredicted RBP8.55□□□□□ -1.04
EPHA4-203ENST00000409938 GOLPH3Q9H4A6 298 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 RABEP2Q9H5N1 569 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 METTL14Q9HCE5 456 aaKnown RBP8.55□□□□□ -1.04
EPHA4-203ENST00000409938 A1CFQ9NQ94 594 aaKnown RBP8.55□□□□□ -1.04
EPHA4-203ENST00000409938 SLX4Q8IY92 1834 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 OPLAHO14841 1288 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 CALUO43852 315 aaPredicted RBP8.55□□□□□ -1.04
EPHA4-203ENST00000409938 FLOT1O75955 427 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 NR3C1P04150 777 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 ITGA4P13612 1032 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 POLD1P28340 1107 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 HADHBP55084 474 aaKnown RBP8.55□□□□□ -1.04
EPHA4-203ENST00000409938 EIF6P56537 245 aaKnown RBP8.55□□□□□ -1.04
EPHA4-203ENST00000409938 MCCD1P59942 119 aaPredicted RBP8.55□□□□□ -1.04
EPHA4-203ENST00000409938 ARHGAP4P98171 946 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 ARID5AQ03989 594 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 ACTN3Q08043 901 aaPredicted RBP8.55□□□□□ -1.04
EPHA4-203ENST00000409938 CEP85LQ5SZL2 805 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 KCTD1Q719H9 257 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 TMEM174Q8WUU8 243 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 TAF4BQ92750 862 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 LRRC45Q96CN5 670 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 VCPKMTQ9H867 229 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 ZDHHC18Q9NUE0 388 aa8.55□□□□□ -1.04
EPHA4-203ENST00000409938 FAM86B1E9PN63 330 aa8.54□□□□□ -1.04
EPHA4-203ENST00000409938 EIF3DO15371 548 aaKnown RBP eCLIP8.54□□□□□ -1.04
EPHA4-203ENST00000409938 RASSF9O75901 435 aa8.54□□□□□ -1.04
EPHA4-203ENST00000409938 CYP3A4P08684 503 aa8.54□□□□□ -1.04
EPHA4-203ENST00000409938 FAM86B2P0C5J1 330 aa8.54□□□□□ -1.04
EPHA4-203ENST00000409938 XRCC5P13010 732 aaKnown RBP8.54□□□□□ -1.04
EPHA4-203ENST00000409938 COL11A2P13942 1736 aaPredicted RBP8.54□□□□□ -1.04
EPHA4-203ENST00000409938 SEC24CP53992 1094 aa8.54□□□□□ -1.04
EPHA4-203ENST00000409938 TRAPPC3LQ5T215 181 aa8.54□□□□□ -1.04
EPHA4-203ENST00000409938 FBXW10Q5XX13 1052 aa8.54□□□□□ -1.04
EPHA4-203ENST00000409938 DDX42Q86XP3 938 aaKnown RBP eCLIP8.54□□□□□ -1.04
EPHA4-203ENST00000409938 DNAAF5Q86Y56 855 aa8.54□□□□□ -1.04
EPHA4-203ENST00000409938 RBM17Q96I25 401 aaKnown RBP8.54□□□□□ -1.04
EPHA4-203ENST00000409938 FAM20AQ96MK3 541 aa8.54□□□□□ -1.04
EPHA4-203ENST00000409938 LRRC4CQ9HCJ2 640 aa8.54□□□□□ -1.04
EPHA4-203ENST00000409938 DMAC2Q9NW81 257 aa8.54□□□□□ -1.04
EPHA4-203ENST00000409938 CNOT8Q9UFF9 292 aaKnown RBP8.54□□□□□ -1.04
EPHA4-203ENST00000409938 RGPD3A6NKT7 1758 aaPredicted RBP8.54□□□□□ -1.04
EPHA4-203ENST00000409938 RGPD4Q7Z3J3 1758 aa8.54□□□□□ -1.04
EPHA4-203ENST00000409938 SPATA31A6Q5VVP1 1343 aa8.54□□□□□ -1.04
EPHA4-203ENST00000409938 F8VZ95 297 aa8.54□□□□□ -1.04
EPHA4-203ENST00000409938 CASP4P49662 377 aa8.54□□□□□ -1.04
EPHA4-203ENST00000409938 GSCP56915 257 aaPredicted RBP8.54□□□□□ -1.04
EPHA4-203ENST00000409938 APOBEC3HQ6NTF7 200 aaKnown RBP8.54□□□□□ -1.04
EPHA4-203ENST00000409938 SYCE1Q8N0S2 351 aa8.54□□□□□ -1.04
EPHA4-203ENST00000409938 RPGRQ92834 1020 aaKnown RBP8.54□□□□□ -1.04
EPHA4-203ENST00000409938 CYFIP2Q96F07 1278 aa8.54□□□□□ -1.04
EPHA4-203ENST00000409938 BCAS3Q9H6U6 928 aa8.54□□□□□ -1.04
EPHA4-203ENST00000409938 NYAP2Q9P242 653 aa8.54□□□□□ -1.04
EPHA4-203ENST00000409938 DIS3Q9Y2L1 958 aaKnown RBP8.54□□□□□ -1.04
EPHA4-203ENST00000409938 DAAM1Q9Y4D1 1078 aa8.54□□□□□ -1.04
EPHA4-203ENST00000409938 GCOM1H8Y6P7 765 aaPredicted RBP8.53□□□□□ -1.04
EPHA4-203ENST00000409938 CEP104O60308 925 aa8.53□□□□□ -1.04
EPHA4-203ENST00000409938 H2AFZP0C0S5 128 aa8.53□□□□□ -1.04
EPHA4-203ENST00000409938 TMEM253P0C7T8 217 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms