RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 TCHHQ07283 1943 aa23.02■■□□□ 1.28
C4orf48-202ENST00000409860 TMEM150BA6NC51 233 aa23.01■■□□□ 1.27
C4orf48-202ENST00000409860 PFKFB1P16118 471 aa23.01■■□□□ 1.27
C4orf48-202ENST00000409860 C1orf53Q5VUE5 145 aa23.01■■□□□ 1.27
C4orf48-202ENST00000409860 LMBR1Q8WVP7 490 aa23.01■■□□□ 1.27
C4orf48-202ENST00000409860 CYP26B1Q9NR63 512 aa23.01■■□□□ 1.27
C4orf48-202ENST00000409860 STK17AQ9UEE5 414 aa23.01■■□□□ 1.27
C4orf48-202ENST00000409860 KCNH3Q9ULD8 1083 aa23.01■■□□□ 1.27
C4orf48-202ENST00000409860 A0A087WWV3 80 aa23■■□□□ 1.27
C4orf48-202ENST00000409860 A0A1B0GVL5 298 aa23■■□□□ 1.27
C4orf48-202ENST00000409860 ARHGEF35A5YM69 484 aa23■■□□□ 1.27
C4orf48-202ENST00000409860 E9PMD0 336 aa23■■□□□ 1.27
C4orf48-202ENST00000409860 ZBTB39O15060 712 aa23■■□□□ 1.27
C4orf48-202ENST00000409860 EYA4O95677 639 aa23■■□□□ 1.27
C4orf48-202ENST00000409860 HOXC8P31273 242 aa23■■□□□ 1.27
C4orf48-202ENST00000409860 STAT6P42226 847 aa23■■□□□ 1.27
C4orf48-202ENST00000409860 RARRES1P49788 294 aa23■■□□□ 1.27
C4orf48-202ENST00000409860 NPEPPSP55786 919 aa23■■□□□ 1.27
C4orf48-202ENST00000409860 SNX17Q15036 470 aa23■■□□□ 1.27
C4orf48-202ENST00000409860 PDILTQ8N807 584 aa23■■□□□ 1.27
C4orf48-202ENST00000409860 PANK2Q9BZ23 570 aa23■■□□□ 1.27
C4orf48-202ENST00000409860 ZBTB42B2RXF5 422 aa22.99■■□□□ 1.27
C4orf48-202ENST00000409860 PRPF40AO75400 957 aaKnown RBP22.99■■□□□ 1.27
C4orf48-202ENST00000409860 CDK7P50613 346 aa22.99■■□□□ 1.27
C4orf48-202ENST00000409860 TBC1D8BQ0IIM8 1120 aa22.99■■□□□ 1.27
C4orf48-202ENST00000409860 TARBP2Q15633 366 aaKnown RBP22.99■■□□□ 1.27
C4orf48-202ENST00000409860 GDF6Q6KF10 455 aaPredicted RBP22.99■■□□□ 1.27
C4orf48-202ENST00000409860 KCNK18Q7Z418 384 aa22.99■■□□□ 1.27
C4orf48-202ENST00000409860 EXOC8Q8IYI6 725 aa22.99■■□□□ 1.27
C4orf48-202ENST00000409860 IQUBQ8NA54 791 aa22.99■■□□□ 1.27
C4orf48-202ENST00000409860 TRAPPC12Q8WVT3 735 aa22.99■■□□□ 1.27
C4orf48-202ENST00000409860 RAD54LQ92698 747 aa22.99■■□□□ 1.27
C4orf48-202ENST00000409860 SH2D3AQ9BRG2 576 aa22.99■■□□□ 1.27
C4orf48-202ENST00000409860 BHMT2Q9H2M3 363 aa22.99■■□□□ 1.27
C4orf48-202ENST00000409860 TUBE1Q9UJT0 475 aa22.99■■□□□ 1.27
C4orf48-202ENST00000409860 NOD1Q9Y239 953 aa22.99■■□□□ 1.27
C4orf48-202ENST00000409860 MYH9P35579 1960 aaKnown RBP22.98■■□□□ 1.27
C4orf48-202ENST00000409860 A0A087X0B3 334 aa22.98■■□□□ 1.27
C4orf48-202ENST00000409860 FAM237AA0A1B0GTK4 181 aa22.98■■□□□ 1.27
C4orf48-202ENST00000409860 TLR3O15455 904 aaKnown RBP22.98■■□□□ 1.27
C4orf48-202ENST00000409860 MAGEB2O15479 319 aa22.98■■□□□ 1.27
C4orf48-202ENST00000409860 RFC5P40937 340 aa22.98■■□□□ 1.27
C4orf48-202ENST00000409860 UBE2HP62256 183 aa22.98■■□□□ 1.27
C4orf48-202ENST00000409860 TRIM60Q495X7 471 aa22.98■■□□□ 1.27
C4orf48-202ENST00000409860 DHX58Q96C10 678 aa22.98■■□□□ 1.27
C4orf48-202ENST00000409860 JPH2Q9BR39 696 aaPredicted RBP22.98■■□□□ 1.27
C4orf48-202ENST00000409860 HPSEQ9Y251 543 aa22.98■■□□□ 1.27
C4orf48-202ENST00000409860 MBLAC1A4D2B0 266 aaPredicted RBP22.97■■□□□ 1.27
C4orf48-202ENST00000409860 POLR2DO15514 142 aaKnown RBP22.97■■□□□ 1.27
C4orf48-202ENST00000409860 PQBP1O60828 265 aaKnown RBP22.97■■□□□ 1.27
C4orf48-202ENST00000409860 SSBP05455 408 aaKnown RBP eCLIP22.97■■□□□ 1.27
C4orf48-202ENST00000409860 PLA2G4BP0C869 781 aa22.97■■□□□ 1.27
C4orf48-202ENST00000409860 SYKP43405 635 aa22.97■■□□□ 1.27
C4orf48-202ENST00000409860 POLGP54098 1239 aaPredicted RBP22.97■■□□□ 1.27
C4orf48-202ENST00000409860 RTP1P59025 263 aa22.97■■□□□ 1.27
C4orf48-202ENST00000409860 PTGISQ16647 500 aa22.97■■□□□ 1.27
C4orf48-202ENST00000409860 MTHFD1LQ6UB35 978 aa22.97■■□□□ 1.27
C4orf48-202ENST00000409860 ANKRD33Q7Z3H0 272 aa22.97■■□□□ 1.27
C4orf48-202ENST00000409860 FAM126BQ8IXS8 530 aa22.97■■□□□ 1.27
C4orf48-202ENST00000409860 RETREG2Q8NC44 543 aa22.97■■□□□ 1.27
C4orf48-202ENST00000409860 SLC7A3Q8WY07 619 aa22.97■■□□□ 1.27
C4orf48-202ENST00000409860 LARP4BQ92615 738 aaKnown RBP22.97■■□□□ 1.27
C4orf48-202ENST00000409860 CUEDC2Q9H467 287 aa22.97■■□□□ 1.27
C4orf48-202ENST00000409860 GOLPH3LQ9H4A5 285 aa22.97■■□□□ 1.27
C4orf48-202ENST00000409860 BLOC1S4Q9NUP1 217 aa22.97■■□□□ 1.27
C4orf48-202ENST00000409860 TRMT13Q9NUP7 481 aaKnown RBP22.97■■□□□ 1.27
C4orf48-202ENST00000409860 ATP11BQ9Y2G3 1177 aa22.97■■□□□ 1.27
C4orf48-202ENST00000409860 DCDC2CA8MYV0 355 aa22.96■■□□□ 1.27
C4orf48-202ENST00000409860 GADD45BO75293 160 aaPredicted RBP22.96■■□□□ 1.27
C4orf48-202ENST00000409860 DGAT1O75907 488 aa22.96■■□□□ 1.27
C4orf48-202ENST00000409860 C22orf31O95567 290 aa22.96■■□□□ 1.27
C4orf48-202ENST00000409860 KLRC1P26715 233 aa22.96■■□□□ 1.27
C4orf48-202ENST00000409860 NDUFA8P51970 172 aa22.96■■□□□ 1.27
C4orf48-202ENST00000409860 ADAM17P78536 824 aa22.96■■□□□ 1.27
C4orf48-202ENST00000409860 ZNF200P98182 395 aaPredicted RBP22.96■■□□□ 1.27
C4orf48-202ENST00000409860 HIC1Q14526 733 aa22.96■■□□□ 1.27
C4orf48-202ENST00000409860 LRRC26Q2I0M4 334 aa22.96■■□□□ 1.27
C4orf48-202ENST00000409860 MARCH8Q5T0T0 291 aa22.96■■□□□ 1.27
C4orf48-202ENST00000409860 PADI6Q6TGC4 694 aa22.96■■□□□ 1.27
C4orf48-202ENST00000409860 SYT2Q8N9I0 419 aaPredicted RBP22.96■■□□□ 1.27
C4orf48-202ENST00000409860 TOX2Q96NM4 488 aa22.96■■□□□ 1.27
C4orf48-202ENST00000409860 CEP89Q96ST8 783 aa22.96■■□□□ 1.27
C4orf48-202ENST00000409860 ATP6V0A4Q9HBG4 840 aa22.96■■□□□ 1.27
C4orf48-202ENST00000409860 USP25Q9UHP3 1055 aa22.96■■□□□ 1.27
C4orf48-202ENST00000409860 BRCA2P51587 3418 aa22.95■■□□□ 1.27
C4orf48-202ENST00000409860 TREHO43280 583 aa22.95■■□□□ 1.26
C4orf48-202ENST00000409860 B4GALT4O60513 344 aa22.95■■□□□ 1.26
C4orf48-202ENST00000409860 USO1O60763 962 aaKnown RBP22.95■■□□□ 1.26
C4orf48-202ENST00000409860 MAFO75444 373 aaPredicted RBP22.95■■□□□ 1.26
C4orf48-202ENST00000409860 MCM6Q14566 821 aa22.95■■□□□ 1.26
C4orf48-202ENST00000409860 E2F4Q16254 413 aa22.95■■□□□ 1.26
C4orf48-202ENST00000409860 NAALADL2Q58DX5 795 aa22.95■■□□□ 1.26
C4orf48-202ENST00000409860 TAF2Q6P1X5 1199 aa22.95■■□□□ 1.26
C4orf48-202ENST00000409860 LRRC15Q8TF66 581 aa22.95■■□□□ 1.26
C4orf48-202ENST00000409860 HTATIP2Q9BUP3 242 aa22.95■■□□□ 1.26
C4orf48-202ENST00000409860 TRPV6Q9H1D0 765 aa22.95■■□□□ 1.26
C4orf48-202ENST00000409860 DHX33Q9H6R0 707 aaKnown RBP22.95■■□□□ 1.26
C4orf48-202ENST00000409860 MAGEF1Q9HAY2 307 aa22.95■■□□□ 1.26
C4orf48-202ENST00000409860 PCDHA2Q9Y5H9 948 aa22.95■■□□□ 1.26
C4orf48-202ENST00000409860 GAS2O43903 313 aaKnown RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms