RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 MB21D2Q8IYB1 491 aaPredicted RBP14.45□□□□□ -0.1
CHRNA1-205ENST00000409542 SRBD1Q8N5C6 995 aaKnown RBP14.45□□□□□ -0.1
CHRNA1-205ENST00000409542 RRP36Q96EU6 259 aaKnown RBP14.45□□□□□ -0.1
CHRNA1-205ENST00000409542 SH2B1Q9NRF2 756 aaPredicted RBP14.45□□□□□ -0.1
CHRNA1-205ENST00000409542 TRPV2Q9Y5S1 764 aa14.45□□□□□ -0.1
CHRNA1-205ENST00000409542 CYP46A1Q9Y6A2 500 aa14.45□□□□□ -0.1
CHRNA1-205ENST00000409542 hCG_1642624A0A1W2PR95 340 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 PRPF40AO75400 957 aaKnown RBP14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 SCG2P13521 617 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 VCPP55072 806 aaKnown RBP14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 CREB3L3Q68CJ9 461 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 NCOA7Q8NI08 942 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 RPGRIP1Q96KN7 1286 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 JAKMIP1Q96N16 626 aaKnown RBP14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 PANK2Q9BZ23 570 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 CDHR5Q9HBB8 845 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 LY9Q9HBG7 655 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 PDRG1Q9NUG6 133 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 FAM86C1Q9NVL1 165 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 U3KPZ7 1027 aaPredicted RBP14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 IGSF9BQ9UPX0 1349 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 ZDBF2Q9HCK1 2354 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 FNDC1Q4ZHG4 1894 aaPredicted RBP14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 RXRAP19793 462 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 PSMA5P28066 241 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 PTPN5P54829 565 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 ERVFC1P60507 584 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 MTMR1Q13613 665 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 PLCB4Q15147 1175 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 RNF20Q5VTR2 975 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 IER5Q5VY09 327 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 ZNF654Q8IZM8 581 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 CYP2W1Q8TAV3 490 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 ATP8B4Q8TF62 1192 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 ASIC4Q96FT7 647 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 SNX27Q96L92 541 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 PHF7Q9BWX1 381 aaPredicted RBP14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 FTHL17Q9BXU8 183 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 CELF4Q9BZC1 486 aaKnown RBP14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 TLE6Q9H808 572 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 PSTPIP2Q9H939 334 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 JADE2Q9NQC1 790 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 PCDHA2Q9Y5H9 948 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 SQORQ9Y6N5 450 aa14.44□□□□□ -0.1
CHRNA1-205ENST00000409542 RRN3P2A6NIE6 340 aa14.43□□□□□ -0.1
CHRNA1-205ENST00000409542 SLC27A2O14975 620 aa14.43□□□□□ -0.1
CHRNA1-205ENST00000409542 STAG3L1P0CL83 205 aa14.43□□□□□ -0.1
CHRNA1-205ENST00000409542 PAK2Q13177 524 aa14.43□□□□□ -0.1
CHRNA1-205ENST00000409542 TSGA10IPQ3SY00 556 aa14.43□□□□□ -0.1
CHRNA1-205ENST00000409542 FAM102BQ5T8I3 360 aa14.43□□□□□ -0.1
CHRNA1-205ENST00000409542 RALYLQ86SE5 291 aaKnown RBP14.43□□□□□ -0.1
CHRNA1-205ENST00000409542 RAB11FIP4Q86YS3 637 aa14.43□□□□□ -0.1
CHRNA1-205ENST00000409542 FBXL6Q8N531 539 aa14.43□□□□□ -0.1
CHRNA1-205ENST00000409542 GPT2Q8TD30 523 aa14.43□□□□□ -0.1
CHRNA1-205ENST00000409542 SUSD6Q92537 303 aa14.43□□□□□ -0.1
CHRNA1-205ENST00000409542 PPP2R3CQ969Q6 453 aa14.43□□□□□ -0.1
CHRNA1-205ENST00000409542 PCDHA6Q9UN73 950 aa14.43□□□□□ -0.1
CHRNA1-205ENST00000409542 PCDHA8Q9Y5H6 950 aa14.43□□□□□ -0.1
CHRNA1-205ENST00000409542 SART3Q15020 963 aaKnown RBP14.42□□□□□ -0.1
CHRNA1-205ENST00000409542 ZSCAN23Q3MJ62 389 aa14.42□□□□□ -0.1
CHRNA1-205ENST00000409542 CAVIN1Q6NZI2 390 aaKnown RBP14.42□□□□□ -0.1
CHRNA1-205ENST00000409542 TMEM87AQ8NBN3 555 aa14.42□□□□□ -0.1
CHRNA1-205ENST00000409542 MICAL1Q8TDZ2 1067 aa14.42□□□□□ -0.1
CHRNA1-205ENST00000409542 TMEM40Q8WWA1 233 aa14.42□□□□□ -0.1
CHRNA1-205ENST00000409542 CDHR1Q96JP9 859 aa14.42□□□□□ -0.1
CHRNA1-205ENST00000409542 MAP3K14Q99558 947 aa14.42□□□□□ -0.1
CHRNA1-205ENST00000409542 APOL5Q9BWW9 433 aa14.42□□□□□ -0.1
CHRNA1-205ENST00000409542 SLC9A2Q9UBY0 812 aa14.42□□□□□ -0.1
CHRNA1-205ENST00000409542 LRFN2Q9ULH4 789 aa14.42□□□□□ -0.1
CHRNA1-205ENST00000409542 TRPC6Q9Y210 931 aa14.42□□□□□ -0.1
CHRNA1-205ENST00000409542 NOC2LQ9Y3T9 749 aaKnown RBP14.42□□□□□ -0.1
CHRNA1-205ENST00000409542 TBKBP1A7MCY6 615 aa14.41□□□□□ -0.1
CHRNA1-205ENST00000409542 PDGFBP01127 241 aaPredicted RBP14.41□□□□□ -0.1
CHRNA1-205ENST00000409542 ARP10275 920 aa14.41□□□□□ -0.1
CHRNA1-205ENST00000409542 PDIA4P13667 645 aaKnown RBP14.41□□□□□ -0.1
CHRNA1-205ENST00000409542 SMARCA1P28370 1054 aa14.41□□□□□ -0.1
CHRNA1-205ENST00000409542 SARSP49591 514 aaKnown RBP14.41□□□□□ -0.1
CHRNA1-205ENST00000409542 ACTR2P61160 394 aa14.41□□□□□ -0.1
CHRNA1-205ENST00000409542 KRT76Q01546 638 aa14.41□□□□□ -0.1
CHRNA1-205ENST00000409542 SIGLEC14Q08ET2 396 aa14.41□□□□□ -0.1
CHRNA1-205ENST00000409542 APOBRQ0VD83 1088 aa14.41□□□□□ -0.1
CHRNA1-205ENST00000409542 NFX1Q12986 1120 aaKnown RBP14.41□□□□□ -0.1
CHRNA1-205ENST00000409542 DUSP6Q16828 381 aa14.41□□□□□ -0.1
CHRNA1-205ENST00000409542 ADCK5Q3MIX3 580 aa14.41□□□□□ -0.1
CHRNA1-205ENST00000409542 MTHFD1LQ6UB35 978 aa14.41□□□□□ -0.1
CHRNA1-205ENST00000409542 SUGP1Q8IWZ8 645 aaKnown RBP14.41□□□□□ -0.1
CHRNA1-205ENST00000409542 CCDC82Q8N4S0 544 aa14.41□□□□□ -0.1
CHRNA1-205ENST00000409542 CTCFLQ8NI51 663 aaPredicted RBP14.41□□□□□ -0.1
CHRNA1-205ENST00000409542 PGBD1Q96JS3 809 aa14.41□□□□□ -0.1
CHRNA1-205ENST00000409542 S1PR5Q9H228 398 aa14.41□□□□□ -0.1
CHRNA1-205ENST00000409542 ERVK-5Q9HDB9 667 aa14.41□□□□□ -0.1
CHRNA1-205ENST00000409542 JPH1Q9HDC5 661 aaPredicted RBP14.41□□□□□ -0.1
CHRNA1-205ENST00000409542 KCNH7Q9NS40 1196 aa14.41□□□□□ -0.1
CHRNA1-205ENST00000409542 TYW1Q9NV66 732 aaKnown RBP14.41□□□□□ -0.1
CHRNA1-205ENST00000409542 SEC63Q9UGP8 760 aaKnown RBP14.41□□□□□ -0.1
CHRNA1-205ENST00000409542 CDH22Q9UJ99 828 aa14.41□□□□□ -0.1
CHRNA1-205ENST00000409542 SMC3Q9UQE7 1217 aa14.41□□□□□ -0.1
CHRNA1-205ENST00000409542 KDM3AQ9Y4C1 1321 aa14.41□□□□□ -0.1
CHRNA1-205ENST00000409542 SMIM35A0A1B0GVV1 85 aa14.4□□□□□ -0.1
CHRNA1-205ENST00000409542 M0QZ92 97 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms