RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 EIF3DO15371 548 aaKnown RBP eCLIP6.92□□□□□ -1.3
GTF3C3-202ENST00000409364 DKC1O60832 514 aaKnown RBP eCLIP6.92□□□□□ -1.3
GTF3C3-202ENST00000409364 GUCY2CP25092 1073 aa6.92□□□□□ -1.3
GTF3C3-202ENST00000409364 ZNF131P52739 623 aa6.92□□□□□ -1.3
GTF3C3-202ENST00000409364 ZBED6P86452 979 aa6.92□□□□□ -1.3
GTF3C3-202ENST00000409364 KRT76Q01546 638 aa6.92□□□□□ -1.3
GTF3C3-202ENST00000409364 SYCP1Q15431 976 aa6.92□□□□□ -1.3
GTF3C3-202ENST00000409364 CCDC40Q4G0X9 1142 aa6.92□□□□□ -1.3
GTF3C3-202ENST00000409364 SFR1Q86XK3 245 aa6.92□□□□□ -1.3
GTF3C3-202ENST00000409364 ERO1BQ86YB8 467 aa6.92□□□□□ -1.3
GTF3C3-202ENST00000409364 NELFCDQ8IXH7 590 aa6.92□□□□□ -1.3
GTF3C3-202ENST00000409364 ZC3H3Q8IXZ2 948 aaKnown RBP6.92□□□□□ -1.3
GTF3C3-202ENST00000409364 C4orf19Q8IY42 314 aa6.92□□□□□ -1.3
GTF3C3-202ENST00000409364 ANKRD13AQ8IZ07 590 aa6.92□□□□□ -1.3
GTF3C3-202ENST00000409364 PROCA1Q8NCQ7 364 aaPredicted RBP6.92□□□□□ -1.3
GTF3C3-202ENST00000409364 GLIS3Q8NEA6 775 aa6.92□□□□□ -1.3
GTF3C3-202ENST00000409364 IL31RAQ8NI17 732 aa6.92□□□□□ -1.3
GTF3C3-202ENST00000409364 ZNF592Q92610 1267 aa6.92□□□□□ -1.3
GTF3C3-202ENST00000409364 ZFP91Q96JP5 570 aaPredicted RBP6.92□□□□□ -1.3
GTF3C3-202ENST00000409364 IWS1Q96ST2 819 aa6.92□□□□□ -1.3
GTF3C3-202ENST00000409364 LXNQ9BS40 222 aa6.92□□□□□ -1.3
GTF3C3-202ENST00000409364 TIPINQ9BVW5 301 aa6.92□□□□□ -1.3
GTF3C3-202ENST00000409364 METTL14Q9HCE5 456 aaKnown RBP6.92□□□□□ -1.3
GTF3C3-202ENST00000409364 FBXO40Q9UH90 709 aa6.92□□□□□ -1.3
GTF3C3-202ENST00000409364 DBR1Q9UK59 544 aaKnown RBP6.92□□□□□ -1.3
GTF3C3-202ENST00000409364 ADGRG1Q9Y653 693 aa6.92□□□□□ -1.3
GTF3C3-202ENST00000409364 MYH7BA7E2Y1 1941 aa6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 TESPA1A2RU30 521 aaPredicted RBP6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 SOWAHDA6NJG2 315 aa6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 SPDYE16A6NNV3 312 aaPredicted RBP6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 WDR64B1ANS9 1081 aa6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 BHMG1C9JSJ3 638 aaPredicted RBP6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 RNF225M0QZC1 329 aaPredicted RBP6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 RIOK3O14730 519 aaKnown RBP6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 GCNT3O95395 438 aa6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 MAPTP10636 758 aaKnown RBP6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 PSMC5P62195 406 aa6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 CDK17Q00537 523 aa6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 ITGB3BPQ13352 177 aaPredicted RBP6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 PLS1Q14651 629 aa6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 GNPTABQ3T906 1256 aa6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 ZNF746Q6NUN9 644 aaPredicted RBP6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 SLC30A10Q6XR72 485 aa6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 LBX2Q6XYB7 198 aa6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 TOGARAM2Q6ZUX3 1019 aa6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 ZNF720Q7Z2F6 126 aa6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 FRMD5Q7Z6J6 570 aa6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 DNERQ8NFT8 737 aa6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 WNK4Q96J92 1243 aa6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 INPP4AQ96PE3 977 aaPredicted RBP6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 KCNK17Q96T54 332 aa6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 SENP7Q9BQF6 1050 aa6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 PRKD2Q9BZL6 878 aa6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 ANKEF1Q9NU02 776 aa6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 TYW1Q9NV66 732 aaKnown RBP6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 CYP39A1Q9NYL5 469 aa6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 LARSQ9P2J5 1176 aaKnown RBP6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 PCDHA10Q9Y5I2 948 aa6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 EPN1Q9Y6I3 576 aaPredicted RBP6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 PHLPP2Q6ZVD8 1323 aa6.91□□□□□ -1.3
GTF3C3-202ENST00000409364 ARFGEF1Q9Y6D6 1849 aa6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 SFI1A8K8P3 1242 aa6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 DDX39AO00148 427 aaKnown RBP6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 ZBTB39O15060 712 aa6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 ATP9AO75110 1047 aa6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 PRPF6O94906 941 aaKnown RBP6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 YBX3P16989 372 aaKnown RBP eCLIP6.9□□□□□ -1.35e-8■□□□□ 8.5
GTF3C3-202ENST00000409364 NR2F2P24468 414 aa6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 HNRNPH3P31942 346 aaKnown RBP6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 EPHX2P34913 555 aa6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 KRT83P78385 493 aa6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 ALCAMQ13740 583 aa6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 STXBP2Q15833 593 aa6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 MEA1Q16626 185 aa6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 NFIL3Q16649 462 aa6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 ODR4Q5SWX8 454 aa6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 TRIM65Q6PJ69 517 aa6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 PADI6Q6TGC4 694 aa6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 RAD9BQ6WBX8 426 aa6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 SYT10Q6XYQ8 523 aa6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 FASTKD5Q7L8L6 764 aaKnown RBP6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 OTUD6AQ7L8S5 288 aa6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 RIOX2Q8IUF8 465 aa6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 TRIM59Q8IWR1 403 aa6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 FAM178BQ8IXR5 827 aa6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 SMAP1Q8IYB5 467 aaPredicted RBP6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 CCDC170Q8IYT3 715 aa6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 BANK1Q8NDB2 785 aa6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 SLC17A8Q8NDX2 589 aa6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 GOLGA5Q8TBA6 731 aa6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 MOV10L1Q9BXT6 1211 aaKnown RBP6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 FGFBP2Q9BYJ0 223 aa6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 TTYH3Q9C0H2 523 aa6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 NUCKS1Q9H1E3 243 aaKnown RBP6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 MMRN2Q9H8L6 949 aa6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 PKD2L1Q9P0L9 805 aa6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 WRAP73Q9P2S5 460 aaPredicted RBP6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 ARMCX3Q9UH62 379 aaPredicted RBP6.9□□□□□ -1.3
GTF3C3-202ENST00000409364 SIK3Q9Y2K2 1263 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms