RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 DACT1Q9NYF0 836 aa22.84■■□□□ 1.25
VSX1-203ENST00000409285 KCND2Q9NZV8 630 aa22.84■■□□□ 1.25
VSX1-203ENST00000409285 PHF24Q9UPV7 400 aa22.84■■□□□ 1.25
VSX1-203ENST00000409285 KINO60870 393 aaKnown RBP22.83■■□□□ 1.25
VSX1-203ENST00000409285 CAPN15O75808 1086 aa22.83■■□□□ 1.25
VSX1-203ENST00000409285 ACLYP53396 1101 aa22.83■■□□□ 1.25
VSX1-203ENST00000409285 SLC12A3P55017 1021 aa22.83■■□□□ 1.25
VSX1-203ENST00000409285 MFSD10Q14728 455 aa22.83■■□□□ 1.25
VSX1-203ENST00000409285 TARBP2Q15633 366 aaKnown RBP22.83■■□□□ 1.25
VSX1-203ENST00000409285 KIAA0753Q2KHM9 967 aa22.83■■□□□ 1.25
VSX1-203ENST00000409285 KANK3Q6NY19 840 aa22.83■■□□□ 1.25
VSX1-203ENST00000409285 CXCL17Q6UXB2 119 aa22.83■■□□□ 1.25
VSX1-203ENST00000409285 CEP57L1Q8IYX8 460 aa22.83■■□□□ 1.25
VSX1-203ENST00000409285 ANKLE1Q8NAG6 615 aa22.83■■□□□ 1.25
VSX1-203ENST00000409285 BHMT2Q9H2M3 363 aa22.83■■□□□ 1.25
VSX1-203ENST00000409285 SEPT9Q9UHD8 586 aaPredicted RBP22.83■■□□□ 1.25
VSX1-203ENST00000409285 ZBTB42B2RXF5 422 aa22.82■■□□□ 1.24
VSX1-203ENST00000409285 KBTBD13C9JR72 458 aa22.82■■□□□ 1.24
VSX1-203ENST00000409285 ZBTB39O15060 712 aa22.82■■□□□ 1.24
VSX1-203ENST00000409285 PLA2G4BP0C869 781 aa22.82■■□□□ 1.24
VSX1-203ENST00000409285 MARK3P27448 753 aa22.82■■□□□ 1.24
VSX1-203ENST00000409285 HOXC8P31273 242 aa22.82■■□□□ 1.24
VSX1-203ENST00000409285 PSEN2P49810 448 aa22.82■■□□□ 1.24
VSX1-203ENST00000409285 KLHL40Q2TBA0 621 aa22.82■■□□□ 1.24
VSX1-203ENST00000409285 CCDC34Q96HJ3 373 aa22.82■■□□□ 1.24
VSX1-203ENST00000409285 CEP89Q96ST8 783 aa22.82■■□□□ 1.24
VSX1-203ENST00000409285 CYP26B1Q9NR63 512 aa22.82■■□□□ 1.24
VSX1-203ENST00000409285 SERTAD1Q9UHV2 236 aa22.82■■□□□ 1.24
VSX1-203ENST00000409285 MYL1P05976 194 aa22.81■■□□□ 1.24
VSX1-203ENST00000409285 SKOR2Q2VWA4 1001 aaPredicted RBP22.81■■□□□ 1.24
VSX1-203ENST00000409285 ZNF484Q5JVG2 852 aa22.81■■□□□ 1.24
VSX1-203ENST00000409285 SV2BQ7L1I2 683 aa22.81■■□□□ 1.24
VSX1-203ENST00000409285 SH3RF1Q7Z6J0 888 aa22.81■■□□□ 1.24
VSX1-203ENST00000409285 SESTD1Q86VW0 696 aa22.81■■□□□ 1.24
VSX1-203ENST00000409285 CNNM3Q8NE01 707 aa22.81■■□□□ 1.24
VSX1-203ENST00000409285 TRPC6Q9Y210 931 aa22.81■■□□□ 1.24
VSX1-203ENST00000409285 PLA2G4FQ68DD2 849 aa22.8■■□□□ 1.24
VSX1-203ENST00000409285 CNNM4Q6P4Q7 775 aa22.8■■□□□ 1.24
VSX1-203ENST00000409285 MTRQ99707 1265 aa22.8■■□□□ 1.24
VSX1-203ENST00000409285 LRRC27Q9C0I9 530 aa22.8■■□□□ 1.24
VSX1-203ENST00000409285 MKI67P46013 3256 aaKnown RBP22.8■■□□□ 1.24
VSX1-203ENST00000409285 NRCAMQ92823 1304 aa22.8■■□□□ 1.24
VSX1-203ENST00000409285 A0A1W2PQ45 241 aaPredicted RBP22.79■■□□□ 1.24
VSX1-203ENST00000409285 A0A1W2PQY0 241 aa22.79■■□□□ 1.24
VSX1-203ENST00000409285 ARHGEF35A5YM69 484 aa22.79■■□□□ 1.24
VSX1-203ENST00000409285 TMEM150BA6NC51 233 aa22.79■■□□□ 1.24
VSX1-203ENST00000409285 SOX10P56693 466 aa22.79■■□□□ 1.24
VSX1-203ENST00000409285 AMPD3Q01432 767 aa22.79■■□□□ 1.24
VSX1-203ENST00000409285 MCM6Q14566 821 aa22.79■■□□□ 1.24
VSX1-203ENST00000409285 XKR9Q5GH70 373 aa22.79■■□□□ 1.24
VSX1-203ENST00000409285 NFRKBQ6P4R8 1299 aa22.79■■□□□ 1.24
VSX1-203ENST00000409285 EXOC8Q8IYI6 725 aa22.79■■□□□ 1.24
VSX1-203ENST00000409285 CEP170P1Q96L14 293 aa22.79■■□□□ 1.24
VSX1-203ENST00000409285 GLT1D1Q96MS3 346 aa22.79■■□□□ 1.24
VSX1-203ENST00000409285 CCDC43Q96MW1 224 aaKnown RBP22.79■■□□□ 1.24
VSX1-203ENST00000409285 SEZ6LQ9BYH1 1024 aa22.79■■□□□ 1.24
VSX1-203ENST00000409285 DGAT1O75907 488 aa22.79■■□□□ 1.24
VSX1-203ENST00000409285 INSRRP14616 1297 aa22.79■■□□□ 1.24
VSX1-203ENST00000409285 RFC5P40937 340 aa22.79■■□□□ 1.24
VSX1-203ENST00000409285 MNX1P50219 401 aaPredicted RBP22.79■■□□□ 1.24
VSX1-203ENST00000409285 NPEPPSP55786 919 aa22.79■■□□□ 1.24
VSX1-203ENST00000409285 RINT1Q6NUQ1 792 aa22.79■■□□□ 1.24
VSX1-203ENST00000409285 PAGE5Q96GU1 130 aa22.79■■□□□ 1.24
VSX1-203ENST00000409285 TIPINQ9BVW5 301 aa22.79■■□□□ 1.24
VSX1-203ENST00000409285 DHX33Q9H6R0 707 aaKnown RBP22.79■■□□□ 1.24
VSX1-203ENST00000409285 HOOK1Q9UJC3 728 aaKnown RBP22.79■■□□□ 1.24
VSX1-203ENST00000409285 SIP14410 1827 aa22.78■■□□□ 1.24
VSX1-203ENST00000409285 A0A087WWV3 80 aa22.78■■□□□ 1.24
VSX1-203ENST00000409285 RRN3P2A6NIE6 340 aa22.78■■□□□ 1.24
VSX1-203ENST00000409285 MYCNP04198 464 aaPredicted RBP22.78■■□□□ 1.24
VSX1-203ENST00000409285 SMIM10L2AP0DMW4 78 aa22.78■■□□□ 1.24
VSX1-203ENST00000409285 SMIM10L2BP0DMW5 78 aa22.78■■□□□ 1.24
VSX1-203ENST00000409285 CYP11B2P19099 503 aa22.78■■□□□ 1.24
VSX1-203ENST00000409285 GUCY2CP25092 1073 aa22.78■■□□□ 1.24
VSX1-203ENST00000409285 PTPN11Q06124 597 aaPredicted RBP22.78■■□□□ 1.24
VSX1-203ENST00000409285 PPFIA1Q13136 1202 aa22.78■■□□□ 1.24
VSX1-203ENST00000409285 MTERF2Q49AM1 385 aa22.78■■□□□ 1.24
VSX1-203ENST00000409285 PADI6Q6TGC4 694 aa22.78■■□□□ 1.24
VSX1-203ENST00000409285 C1orf186Q6ZWK4 172 aa22.78■■□□□ 1.24
VSX1-203ENST00000409285 CLSTN2Q9H4D0 955 aa22.78■■□□□ 1.24
VSX1-203ENST00000409285 PDLIM7Q9NR12 457 aa22.78■■□□□ 1.24
VSX1-203ENST00000409285 GAS2O43903 313 aaKnown RBP22.77■■□□□ 1.24
VSX1-203ENST00000409285 MAFO75444 373 aaPredicted RBP22.77■■□□□ 1.24
VSX1-203ENST00000409285 TFRCP02786 760 aaKnown RBP22.77■■□□□ 1.24
VSX1-203ENST00000409285 ADAM17P78536 824 aa22.77■■□□□ 1.24
VSX1-203ENST00000409285 MDM2Q00987 491 aaPredicted RBP22.77■■□□□ 1.24
VSX1-203ENST00000409285 GRIK4Q16099 956 aa22.77■■□□□ 1.24
VSX1-203ENST00000409285 GPBP1Q86WP2 473 aa22.77■■□□□ 1.24
VSX1-203ENST00000409285 SLC43A3Q8NBI5 491 aa22.77■■□□□ 1.24
VSX1-203ENST00000409285 C7orf25Q9BPX7 421 aa22.77■■□□□ 1.24
VSX1-203ENST00000409285 JPH2Q9BR39 696 aaPredicted RBP22.77■■□□□ 1.24
VSX1-203ENST00000409285 TRIM9Q9C026 710 aa22.77■■□□□ 1.24
VSX1-203ENST00000409285 GRIN2DO15399 1336 aa22.77■■□□□ 1.24
VSX1-203ENST00000409285 IGKV6-21A0A0C4DH24 114 aa22.76■■□□□ 1.23
VSX1-203ENST00000409285 MBLAC1A4D2B0 266 aaPredicted RBP22.76■■□□□ 1.23
VSX1-203ENST00000409285 NBPF20Q3BBV1 942 aa22.76■■□□□ 1.23
VSX1-203ENST00000409285 ARSHQ5FYA8 562 aa22.76■■□□□ 1.23
VSX1-203ENST00000409285 TRMT1LQ7Z2T5 733 aaKnown RBP22.76■■□□□ 1.23
VSX1-203ENST00000409285 C7orf31Q8N865 590 aa22.76■■□□□ 1.23
VSX1-203ENST00000409285 MCPH1Q8NEM0 835 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms