RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 CYTH3O43739 400 aa7.12□□□□□ -1.27
RPA3-204ENST00000406109 DHX16O60231 1041 aaKnown RBP7.12□□□□□ -1.27
RPA3-204ENST00000406109 ATF7P17544 494 aaPredicted RBP7.12□□□□□ -1.27
RPA3-204ENST00000406109 GATMP50440 423 aa7.12□□□□□ -1.27
RPA3-204ENST00000406109 ANTXR2P58335 489 aa7.12□□□□□ -1.27
RPA3-204ENST00000406109 ADCK5Q3MIX3 580 aa7.12□□□□□ -1.27
RPA3-204ENST00000406109 TSGA10IPQ3SY00 556 aa7.12□□□□□ -1.27
RPA3-204ENST00000406109 DHX32Q7L7V1 743 aaKnown RBP7.12□□□□□ -1.27
RPA3-204ENST00000406109 CATIPQ7Z7H3 387 aa7.12□□□□□ -1.27
RPA3-204ENST00000406109 FCHSD1Q86WN1 690 aa7.12□□□□□ -1.27
RPA3-204ENST00000406109 CMTR2Q8IYT2 770 aaKnown RBP7.12□□□□□ -1.27
RPA3-204ENST00000406109 TMTC2Q8N394 836 aa7.12□□□□□ -1.27
RPA3-204ENST00000406109 SAMD3Q8N6K7 520 aa7.12□□□□□ -1.27
RPA3-204ENST00000406109 POF1BQ8WVV4 589 aa7.12□□□□□ -1.27
RPA3-204ENST00000406109 ATOH1Q92858 354 aaPredicted RBP7.12□□□□□ -1.27
RPA3-204ENST00000406109 ZBTB10Q96DT7 871 aa7.12□□□□□ -1.27
RPA3-204ENST00000406109 TMEM87BQ96K49 555 aa7.12□□□□□ -1.27
RPA3-204ENST00000406109 RPGRIP1Q96KN7 1286 aa7.12□□□□□ -1.27
RPA3-204ENST00000406109 JAKMIP1Q96N16 626 aaKnown RBP7.12□□□□□ -1.27
RPA3-204ENST00000406109 LRRC2Q9BYS8 371 aa7.12□□□□□ -1.27
RPA3-204ENST00000406109 S1PR5Q9H228 398 aa7.12□□□□□ -1.27
RPA3-204ENST00000406109 ZSWIM6Q9HCJ5 1215 aa7.12□□□□□ -1.27
RPA3-204ENST00000406109 TLR9Q9NR96 1032 aa7.12□□□□□ -1.27
RPA3-204ENST00000406109 SNX14Q9Y5W7 946 aa7.12□□□□□ -1.27
RPA3-204ENST00000406109 CACNA1IQ9P0X4 2223 aa7.12□□□□□ -1.27
RPA3-204ENST00000406109 EVPLQ92817 2033 aa7.11□□□□□ -1.27
RPA3-204ENST00000406109 USP24Q9UPU5 2620 aa7.11□□□□□ -1.27
RPA3-204ENST00000406109 KLRF2D3W0D1 207 aa7.11□□□□□ -1.27
RPA3-204ENST00000406109 GCOM1H8Y6P7 765 aaPredicted RBP7.11□□□□□ -1.27
RPA3-204ENST00000406109 NOP56O00567 594 aaKnown RBP7.11□□□□□ -1.27
RPA3-204ENST00000406109 SH2B2O14492 632 aaPredicted RBP7.11□□□□□ -1.27
RPA3-204ENST00000406109 PER2O15055 1255 aa7.11□□□□□ -1.27
RPA3-204ENST00000406109 EIF5BO60841 1220 aaKnown RBP7.11□□□□□ -1.27
RPA3-204ENST00000406109 ATP9AO75110 1047 aa7.11□□□□□ -1.27
RPA3-204ENST00000406109 HMGB1P09429 215 aaKnown RBP7.11□□□□□ -1.27
RPA3-204ENST00000406109 POLR2MP0CAP2 368 aa7.11□□□□□ -1.27
RPA3-204ENST00000406109 ARP10275 920 aa7.11□□□□□ -1.27
RPA3-204ENST00000406109 CPA1P15085 419 aa7.11□□□□□ -1.27
RPA3-204ENST00000406109 PSMA5P28066 241 aa7.11□□□□□ -1.27
RPA3-204ENST00000406109 CD52P31358 61 aa7.11□□□□□ -1.27
RPA3-204ENST00000406109 ERVFC1P60507 584 aa7.11□□□□□ -1.27
RPA3-204ENST00000406109 FGD1P98174 961 aa7.11□□□□□ -1.27
RPA3-204ENST00000406109 EXOSC10Q01780 885 aaKnown RBP7.11□□□□□ -1.27
RPA3-204ENST00000406109 COL9A3Q14050 684 aaPredicted RBP7.11□□□□□ -1.27
RPA3-204ENST00000406109 NEDD9Q14511 834 aa7.11□□□□□ -1.27
RPA3-204ENST00000406109 PTPN21Q16825 1174 aa7.11□□□□□ -1.27
RPA3-204ENST00000406109 UTP14CQ5TAP6 766 aaKnown RBP7.11□□□□□ -1.27
RPA3-204ENST00000406109 TAF2Q6P1X5 1199 aa7.11□□□□□ -1.27
RPA3-204ENST00000406109 BLOC1S2Q6QNY1 142 aa7.11□□□□□ -1.27
RPA3-204ENST00000406109 TMEM184AQ6ZMB5 413 aa7.11□□□□□ -1.27
RPA3-204ENST00000406109 SYNE3Q6ZMZ3 975 aa7.11□□□□□ -1.27
RPA3-204ENST00000406109 TSHZ1Q6ZSZ6 1077 aa7.11□□□□□ -1.27
RPA3-204ENST00000406109 DNAJB3Q8WWF6 145 aa7.11□□□□□ -1.27
RPA3-204ENST00000406109 KCNB2Q92953 911 aa7.11□□□□□ -1.27
RPA3-204ENST00000406109 RNF166Q96A37 237 aaPredicted RBP7.11□□□□□ -1.27
RPA3-204ENST00000406109 RIPOR3Q96MK2 946 aa7.11□□□□□ -1.27
RPA3-204ENST00000406109 TCEANC2Q96MN5 208 aa7.11□□□□□ -1.27
RPA3-204ENST00000406109 PIGSQ96S52 555 aa7.11□□□□□ -1.27
RPA3-204ENST00000406109 SENP7Q9BQF6 1050 aa7.11□□□□□ -1.27
RPA3-204ENST00000406109 TMX1Q9H3N1 280 aa7.11□□□□□ -1.27
RPA3-204ENST00000406109 RIOX1Q9H6W3 641 aa7.11□□□□□ -1.27
RPA3-204ENST00000406109 LY9Q9HBG7 655 aa7.11□□□□□ -1.27
RPA3-204ENST00000406109 RTEL1Q9NZ71 1219 aa7.11□□□□□ -1.27
RPA3-204ENST00000406109 NAP1L2Q9ULW6 460 aaPredicted RBP7.11□□□□□ -1.27
RPA3-204ENST00000406109 SMG1Q96Q15 3661 aaKnown RBP7.11□□□□□ -1.27
RPA3-204ENST00000406109 CEP295Q9C0D2 2601 aa7.11□□□□□ -1.27
RPA3-204ENST00000406109 GSTTP1A0A1W2PQM5 241 aa7.1□□□□□ -1.27
RPA3-204ENST00000406109 PRR23AA6NEV1 266 aa7.1□□□□□ -1.27
RPA3-204ENST00000406109 FSCN2O14926 492 aa7.1□□□□□ -1.27
RPA3-204ENST00000406109 FIBPO43427 364 aa7.1□□□□□ -1.27
RPA3-204ENST00000406109 EPB41L2O43491 1005 aaKnown RBP7.1□□□□□ -1.27
RPA3-204ENST00000406109 MGEA5O60502 916 aa7.1□□□□□ -1.27
RPA3-204ENST00000406109 PPFIA3O75145 1194 aa7.1□□□□□ -1.27
RPA3-204ENST00000406109 STAM2O75886 525 aa7.1□□□□□ -1.27
RPA3-204ENST00000406109 KCNA2P16389 499 aa7.1□□□□□ -1.27
RPA3-204ENST00000406109 TCF7P36402 384 aaPredicted RBP7.1□□□□□ -1.27
RPA3-204ENST00000406109 NBL1P41271 181 aa7.1□□□□□ -1.27
RPA3-204ENST00000406109 LIFRP42702 1097 aa7.1□□□□□ -1.27
RPA3-204ENST00000406109 PPFIA1Q13136 1202 aa7.1□□□□□ -1.27
RPA3-204ENST00000406109 GRM4Q14833 912 aa7.1□□□□□ -1.27
RPA3-204ENST00000406109 GRIK4Q16099 956 aa7.1□□□□□ -1.27
RPA3-204ENST00000406109 DUSP6Q16828 381 aa7.1□□□□□ -1.27
RPA3-204ENST00000406109 PAN2Q504Q3 1202 aaKnown RBP7.1□□□□□ -1.27
RPA3-204ENST00000406109 SYCE2Q6PIF2 218 aa7.1□□□□□ -1.27
RPA3-204ENST00000406109 Q6ZUG5 572 aa7.1□□□□□ -1.27
RPA3-204ENST00000406109 RAB11FIP4Q86YS3 637 aa7.1□□□□□ -1.27
RPA3-204ENST00000406109 NPAS4Q8IUM7 802 aa7.1□□□□□ -1.27
RPA3-204ENST00000406109 ZNF654Q8IZM8 581 aa7.1□□□□□ -1.27
RPA3-204ENST00000406109 TMEM105Q8N8V8 129 aa7.1□□□□□ -1.27
RPA3-204ENST00000406109 PCYT2Q99447 389 aa7.1□□□□□ -1.27
RPA3-204ENST00000406109 MTA3Q9BTC8 594 aa7.1□□□□□ -1.27
RPA3-204ENST00000406109 MYL10Q9BUA6 226 aa7.1□□□□□ -1.27
RPA3-204ENST00000406109 SMOC2Q9H3U7 446 aa7.1□□□□□ -1.27
RPA3-204ENST00000406109 TLE6Q9H808 572 aa7.1□□□□□ -1.27
RPA3-204ENST00000406109 HCSTQ9UBK5 93 aa7.1□□□□□ -1.27
RPA3-204ENST00000406109 CDH22Q9UJ99 828 aa7.1□□□□□ -1.27
RPA3-204ENST00000406109 TUBE1Q9UJT0 475 aa7.1□□□□□ -1.27
RPA3-204ENST00000406109 ZNF215Q9UL58 517 aaPredicted RBP7.1□□□□□ -1.27
RPA3-204ENST00000406109 PADI3Q9ULW8 664 aa7.1□□□□□ -1.27
RPA3-204ENST00000406109 SLC12A7Q9Y666 1083 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms