RNA–Protein interactions for RNA: ENST00000402340.2

FAM47DP-201, Transcript of family with sequence similarity 47 member D, pseudogene, humanhuman

BASIC

Gene FAM47DP, Length 3,290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM47DP-201ENST00000402340 TYW1Q9NV66 732 aaKnown RBP13.6□□□□□ -0.23
FAM47DP-201ENST00000402340 POTEFA5A3E0 1075 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 POTEIP0CG38 1075 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 CTNNA1P35221 906 aaKnown RBP13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 FLT3P36888 993 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 POTEGQ6S5H5 508 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 POTEEQ6S8J3 1075 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 DDX42Q86XP3 938 aaKnown RBP eCLIP13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 CABS1Q96KC9 395 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 REEP2Q9BRK0 252 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 ANO3Q9BYT9 981 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 SERPINB13Q9UIV8 391 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 STK24Q9Y6E0 443 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 GMNCA6NCL1 334 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 MEIS2O14770 477 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 MARCH6O60337 910 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 RASSF9O75901 435 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 H2AFZP0C0S5 128 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 RFC4P35249 363 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 STAT3P40763 770 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 SMTNP53814 917 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 EIF6P56537 245 aaKnown RBP13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 H2AFVQ71UI9 128 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 CNBD1Q8NA66 436 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 AP1M1Q9BXS5 423 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 DDX47Q9H0S4 455 aaKnown RBP13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 POLD4Q9HCU8 107 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 GEMIN8Q9NWZ8 242 aaKnown RBP13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 POLLQ9UGP5 575 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 DIS3Q9Y2L1 958 aaKnown RBP13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 USP17L15C9J2P7 530 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 USP17L13C9JLJ4 530 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 USP17L11C9JVI0 530 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 USP17L18D6R9N7 530 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 USP17L22D6RA61 530 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 USP17L17D6RBQ6 530 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 USP17L19D6RCP7 530 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 USP17L20D6RJB6 530 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 KRIT1O00522 736 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 ITGA4P13612 1032 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 PSMC6P62333 389 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 PPATQ06203 517 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 USP17L24Q0WX57 530 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 HLTFQ14527 1009 aaKnown RBP eCLIP13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 PRR5LQ6MZQ0 368 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 USP17L6PQ6QN14 398 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 PEX26Q7Z412 305 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 SFR1Q86XK3 245 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 TBC1D16Q8TBP0 767 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 MKL1Q969V6 931 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 P2RX7Q99572 595 aaKnown RBP13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 FAM114A2Q9NRY5 505 aa13.59□□□□□ -0.23
FAM47DP-201ENST00000402340 PPFIA2O75334 1257 aa13.58□□□□□ -0.24
FAM47DP-201ENST00000402340 SLC16A2P36021 539 aa13.58□□□□□ -0.24
FAM47DP-201ENST00000402340 SLC15A2Q16348 729 aa13.58□□□□□ -0.24
FAM47DP-201ENST00000402340 OR2W6PQ8NHA6 318 aa13.58□□□□□ -0.24
FAM47DP-201ENST00000402340 CCDC26Q8TAB7 109 aa13.58□□□□□ -0.24
FAM47DP-201ENST00000402340 ATP8B4Q8TF62 1192 aa13.58□□□□□ -0.24
FAM47DP-201ENST00000402340 TLCD1Q96CP7 247 aa13.58□□□□□ -0.24
FAM47DP-201ENST00000402340 E7EVH7 732 aa13.58□□□□□ -0.24
FAM47DP-201ENST00000402340 NR3C1P04150 777 aa13.58□□□□□ -0.24
FAM47DP-201ENST00000402340 FERP16591 822 aa13.58□□□□□ -0.24
FAM47DP-201ENST00000402340 MMP14P50281 582 aa13.58□□□□□ -0.24
FAM47DP-201ENST00000402340 PPP2R2AP63151 447 aa13.58□□□□□ -0.24
FAM47DP-201ENST00000402340 ENOX2Q16206 610 aaKnown RBP13.58□□□□□ -0.24
FAM47DP-201ENST00000402340 ARMC9Q7Z3E5 817 aa13.58□□□□□ -0.24
FAM47DP-201ENST00000402340 OLFML3Q9NRN5 406 aa13.58□□□□□ -0.24
FAM47DP-201ENST00000402340 CNOT8Q9UFF9 292 aaKnown RBP13.58□□□□□ -0.24
FAM47DP-201ENST00000402340 DDX20Q9UHI6 824 aaKnown RBP13.58□□□□□ -0.24
FAM47DP-201ENST00000402340 AMACRQ9UHK6 382 aa13.58□□□□□ -0.24
FAM47DP-201ENST00000402340 F8VZ95 297 aa13.58□□□□□ -0.24
FAM47DP-201ENST00000402340 DDX3YO15523 660 aaKnown RBP13.58□□□□□ -0.24
FAM47DP-201ENST00000402340 DAPK3O43293 454 aa13.58□□□□□ -0.24
FAM47DP-201ENST00000402340 RPL13P26373 211 aaKnown RBP13.58□□□□□ -0.24
FAM47DP-201ENST00000402340 QRICH1Q2TAL8 776 aa13.58□□□□□ -0.24
FAM47DP-201ENST00000402340 VPS36Q86VN1 386 aa13.58□□□□□ -0.24
FAM47DP-201ENST00000402340 LNX1Q8TBB1 728 aaPredicted RBP13.58□□□□□ -0.24
FAM47DP-201ENST00000402340 CENPTQ96BT3 561 aa13.58□□□□□ -0.24
FAM47DP-201ENST00000402340 DNM3Q9UQ16 869 aa13.58□□□□□ -0.24
FAM47DP-201ENST00000402340 KRT18P05783 430 aaKnown RBP13.57□□□□□ -0.24
FAM47DP-201ENST00000402340 BYSLQ13895 437 aaKnown RBP13.57□□□□□ -0.24
FAM47DP-201ENST00000402340 KCTD1Q719H9 257 aa13.57□□□□□ -0.24
FAM47DP-201ENST00000402340 ACTR5Q9H9F9 607 aaPredicted RBP13.57□□□□□ -0.24
FAM47DP-201ENST00000402340 CCNL1Q9UK58 526 aaPredicted RBP13.57□□□□□ -0.24
FAM47DP-201ENST00000402340 FRMPD4Q14CM0 1322 aa13.57□□□□□ -0.24
FAM47DP-201ENST00000402340 TGFB1I1O43294 461 aa13.57□□□□□ -0.24
FAM47DP-201ENST00000402340 BBOX1O75936 387 aa13.57□□□□□ -0.24
FAM47DP-201ENST00000402340 TMEM253P0C7T8 217 aa13.57□□□□□ -0.24
FAM47DP-201ENST00000402340 HOXA10P31260 410 aaPredicted RBP13.57□□□□□ -0.24
FAM47DP-201ENST00000402340 CIITAP33076 1130 aa13.57□□□□□ -0.24
FAM47DP-201ENST00000402340 PTENP60484 403 aa13.57□□□□□ -0.24
FAM47DP-201ENST00000402340 ARHGAP4P98171 946 aa13.57□□□□□ -0.24
FAM47DP-201ENST00000402340 LACTB2Q53H82 288 aaPredicted RBP13.57□□□□□ -0.24
FAM47DP-201ENST00000402340 DNAAF5Q86Y56 855 aa13.57□□□□□ -0.24
FAM47DP-201ENST00000402340 CCDC13Q8IYE1 715 aa13.57□□□□□ -0.24
FAM47DP-201ENST00000402340 ERMNQ8TAM6 284 aa13.57□□□□□ -0.24
FAM47DP-201ENST00000402340 FAM20AQ96MK3 541 aa13.57□□□□□ -0.24
FAM47DP-201ENST00000402340 NCAPGQ9BPX3 1015 aa13.57□□□□□ -0.24
FAM47DP-201ENST00000402340 VAV3Q9UKW4 847 aa13.57□□□□□ -0.24
FAM47DP-201ENST00000402340 ZMYM2Q9UBW7 1377 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms