RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 PDE1CQ14123 709 aaPredicted RBP8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 RCN2Q14257 317 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 KCTD1Q719H9 257 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 ERICH1Q86X53 443 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 FBXL13Q8NEE6 735 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 INO80BQ9C086 356 aaPredicted RBP8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 GNAT1P11488 350 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 SCP2P22307 547 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 CDR2Q01850 454 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 MECOMQ03112 1051 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 RC3H1Q5TC82 1133 aaKnown RBP8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 ACAD11Q709F0 780 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 SESTD1Q86VW0 696 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 GAS2L3Q86XJ1 694 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 PRPF38AQ8NAV1 312 aaKnown RBP8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 OSBP2Q969R2 916 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 ZNF408Q9H9D4 720 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 SAMSN1Q9NSI8 373 aaKnown RBP8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 PCDHB6Q9Y5E3 794 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 OVOS2A0A0G2JMS6 1433 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 OVOS2A0A0J9YW53 1432 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 OVOS2Q6IE36 1432 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 USP17L3A6NCW0 530 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 USP17L4A6NCW7 530 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 ZBTB5O15062 677 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 FTCDO95954 541 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 IREB2P48200 963 aaKnown RBP8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 DYNLL1P63167 89 aaKnown RBP8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 DOK7Q18PE1 504 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 KCTD16Q68DU8 428 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 OR6B2Q6IFH4 312 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 USP17L1Q7RTZ2 530 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 ADAT2Q7Z6V5 191 aaKnown RBP8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 ABI1Q8IZP0 508 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 THEM5Q8N1Q8 247 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 DNAAF3Q8N9W5 541 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 GCNAQ96QF7 691 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 TRIM45Q9H8W5 580 aaPredicted RBP8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 ABCB6Q9NP58 842 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 MRGBPQ9NV56 204 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 ZSWIM5Q9P217 1185 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 NOVA2Q9UNW9 492 aaKnown RBP8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 TOM1L1O75674 476 aa8.96□□□□□ -0.97
SPTLC3-201ENST00000399002 FAM47CQ5HY64 1035 aa8.96□□□□□ -0.97
SPTLC3-201ENST00000399002 CATSPER1Q8NEC5 780 aa8.96□□□□□ -0.97
SPTLC3-201ENST00000399002 ATP6V1E2Q96A05 226 aa8.96□□□□□ -0.97
SPTLC3-201ENST00000399002 MTBPQ96DY7 904 aa8.96□□□□□ -0.97
SPTLC3-201ENST00000399002 MAGEB5Q9BZ81 275 aa8.96□□□□□ -0.97
SPTLC3-201ENST00000399002 SERPINB2P05120 415 aa8.96□□□□□ -0.97
SPTLC3-201ENST00000399002 PSMA2P25787 234 aa8.96□□□□□ -0.97
SPTLC3-201ENST00000399002 KRT76Q01546 638 aa8.96□□□□□ -0.97
SPTLC3-201ENST00000399002 DIXDC1Q155Q3 683 aa8.96□□□□□ -0.97
SPTLC3-201ENST00000399002 LRIG3Q6UXM1 1119 aa8.96□□□□□ -0.97
SPTLC3-201ENST00000399002 KIAA0825Q8IV33 1275 aa8.96□□□□□ -0.97
SPTLC3-201ENST00000399002 CDKL3Q8IVW4 592 aaPredicted RBP8.96□□□□□ -0.97
SPTLC3-201ENST00000399002 SYT2Q8N9I0 419 aaPredicted RBP8.96□□□□□ -0.97
SPTLC3-201ENST00000399002 USP42Q9H9J4 1324 aaKnown RBP8.96□□□□□ -0.97
SPTLC3-201ENST00000399002 CA4P22748 312 aa8.96□□□□□ -0.98
SPTLC3-201ENST00000399002 SLC1A1P43005 524 aa8.96□□□□□ -0.98
SPTLC3-201ENST00000399002 DYNC1I2Q13409 638 aaKnown RBP8.96□□□□□ -0.98
SPTLC3-201ENST00000399002 SNX1Q13596 522 aa8.96□□□□□ -0.98
SPTLC3-201ENST00000399002 TSGA10IPQ3SY00 556 aa8.96□□□□□ -0.98
SPTLC3-201ENST00000399002 CAPN12Q6ZSI9 719 aa8.96□□□□□ -0.98
SPTLC3-201ENST00000399002 DPP9Q86TI2 863 aa8.96□□□□□ -0.98
SPTLC3-201ENST00000399002 UNC5CLQ8IV45 518 aa8.96□□□□□ -0.98
SPTLC3-201ENST00000399002 WDR75Q8IWA0 830 aaKnown RBP8.96□□□□□ -0.98
SPTLC3-201ENST00000399002 SH3TC2Q8TF17 1288 aa8.96□□□□□ -0.98
SPTLC3-201ENST00000399002 FAF2Q96CS3 445 aa8.96□□□□□ -0.98
SPTLC3-201ENST00000399002 VPS39Q96JC1 886 aa8.96□□□□□ -0.98
SPTLC3-201ENST00000399002 PPP1R2P1Q96PQ5 205 aa8.96□□□□□ -0.98
SPTLC3-201ENST00000399002 TEX12Q9BXU0 123 aa8.96□□□□□ -0.98
SPTLC3-201ENST00000399002 PLEKHA4Q9H4M7 779 aa8.96□□□□□ -0.98
SPTLC3-201ENST00000399002 DNAJC17Q9NVM6 304 aaKnown RBP8.96□□□□□ -0.98
SPTLC3-201ENST00000399002 DNAJC5BQ9UF47 199 aa8.96□□□□□ -0.98
SPTLC3-201ENST00000399002 GUCY2CP25092 1073 aa8.96□□□□□ -0.98
SPTLC3-201ENST00000399002 MAPRE2Q15555 327 aa8.96□□□□□ -0.98
SPTLC3-201ENST00000399002 NAA35Q5VZE5 725 aa8.96□□□□□ -0.98
SPTLC3-201ENST00000399002 ZNF772Q68DY9 489 aaPredicted RBP8.96□□□□□ -0.98
SPTLC3-201ENST00000399002 SPOPLQ6IQ16 392 aa8.96□□□□□ -0.98
SPTLC3-201ENST00000399002 FAM129AQ9BZQ8 928 aa8.96□□□□□ -0.98
SPTLC3-201ENST00000399002 PIH1D3Q9NQM4 214 aaKnown RBP8.96□□□□□ -0.98
SPTLC3-201ENST00000399002 SUGT1Q9Y2Z0 365 aa8.96□□□□□ -0.98
SPTLC3-201ENST00000399002 CHD1O14646 1710 aa8.96□□□□□ -0.98
SPTLC3-201ENST00000399002 ITIH6Q6UXX5 1313 aa8.96□□□□□ -0.98
SPTLC3-201ENST00000399002 COPEO14579 308 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 KCNB1Q14721 858 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 ALKBH5Q6P6C2 394 aaKnown RBP8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 CCDC138Q96M89 665 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 HEXIM2Q96MH2 286 aaKnown RBP8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 ROBO2Q9HCK4 1378 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 ALKQ9UM73 1620 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 NVLO15381 856 aaKnown RBP8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 PSMD3O43242 534 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 APOEP02649 317 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 LRRC41Q15345 812 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 NAALADL2Q58DX5 795 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 TOGARAM2Q6ZUX3 1019 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 CCNYQ8ND76 341 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 GFM2Q969S9 779 aaKnown RBP8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 SNF8Q96H20 258 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms