RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 MTA3Q9BTC8 594 aa18.41■□□□□ 0.54
CUX2-202ENST00000397643 S1PR5Q9H228 398 aa18.41■□□□□ 0.54
CUX2-202ENST00000397643 CDHR5Q9HBB8 845 aa18.41■□□□□ 0.54
CUX2-202ENST00000397643 FAM86C1Q9NVL1 165 aa18.41■□□□□ 0.54
CUX2-202ENST00000397643 LRFN2Q9ULH4 789 aa18.41■□□□□ 0.54
CUX2-202ENST00000397643 NOC2LQ9Y3T9 749 aaKnown RBP18.41■□□□□ 0.54
CUX2-202ENST00000397643 IGKV6D-21A0A0A0MT36 114 aa18.4■□□□□ 0.54
CUX2-202ENST00000397643 C9IYK1 514 aa18.4■□□□□ 0.54
CUX2-202ENST00000397643 SH2B2O14492 632 aaPredicted RBP18.4■□□□□ 0.54
CUX2-202ENST00000397643 ATG7O95352 703 aa18.4■□□□□ 0.54
CUX2-202ENST00000397643 ARP10275 920 aa18.4■□□□□ 0.54
CUX2-202ENST00000397643 IBSPP21815 317 aaPredicted RBP18.4■□□□□ 0.54
CUX2-202ENST00000397643 STAT5BP51692 787 aa18.4■□□□□ 0.54
CUX2-202ENST00000397643 COLGALT1Q8NBJ5 622 aa18.4■□□□□ 0.54
CUX2-202ENST00000397643 NEK1Q96PY6 1258 aa18.4■□□□□ 0.54
CUX2-202ENST00000397643 MXRA8Q9BRK3 442 aa18.4■□□□□ 0.54
CUX2-202ENST00000397643 RGS18Q9NS28 235 aa18.4■□□□□ 0.54
CUX2-202ENST00000397643 PCDHB7Q9Y5E2 793 aa18.4■□□□□ 0.54
CUX2-202ENST00000397643 PCDHB12Q9Y5F1 795 aa18.4■□□□□ 0.54
CUX2-202ENST00000397643 PLXNA3P51805 1871 aa18.39■□□□□ 0.54
CUX2-202ENST00000397643 TBKBP1A7MCY6 615 aa18.39■□□□□ 0.53
CUX2-202ENST00000397643 PRC1O43663 620 aa18.39■□□□□ 0.53
CUX2-202ENST00000397643 NFX1Q12986 1120 aaKnown RBP18.39■□□□□ 0.53
CUX2-202ENST00000397643 TYW1BQ6NUM6 668 aa18.39■□□□□ 0.53
CUX2-202ENST00000397643 SYCE2Q6PIF2 218 aa18.39■□□□□ 0.53
CUX2-202ENST00000397643 FAM43BQ6ZT52 329 aaPredicted RBP18.39■□□□□ 0.53
CUX2-202ENST00000397643 KIAA0319LQ8IZA0 1049 aa18.39■□□□□ 0.53
CUX2-202ENST00000397643 MICAL1Q8TDZ2 1067 aa18.39■□□□□ 0.53
CUX2-202ENST00000397643 TNPO1Q92973 898 aaKnown RBP18.39■□□□□ 0.53
CUX2-202ENST00000397643 ADAM2Q99965 735 aa18.39■□□□□ 0.53
CUX2-202ENST00000397643 CWH43Q9H720 699 aa18.39■□□□□ 0.53
CUX2-202ENST00000397643 AGO4Q9HCK5 861 aaKnown RBP18.39■□□□□ 0.53
CUX2-202ENST00000397643 C1orf112Q9NSG2 853 aa18.39■□□□□ 0.53
CUX2-202ENST00000397643 GINS2Q9Y248 185 aa18.39■□□□□ 0.53
CUX2-202ENST00000397643 SPTBN4Q9H254 2564 aa18.38■□□□□ 0.53
CUX2-202ENST00000397643 FSD2A1L4K1 749 aa18.38■□□□□ 0.53
CUX2-202ENST00000397643 ZBTB42B2RXF5 422 aa18.38■□□□□ 0.53
CUX2-202ENST00000397643 RPS6KA5O75582 802 aa18.38■□□□□ 0.53
CUX2-202ENST00000397643 CCNE2O96020 404 aa18.38■□□□□ 0.53
CUX2-202ENST00000397643 PDGFBP01127 241 aaPredicted RBP18.38■□□□□ 0.53
CUX2-202ENST00000397643 KLRC1P26715 233 aa18.38■□□□□ 0.53
CUX2-202ENST00000397643 AVPR2P30518 371 aa18.38■□□□□ 0.53
CUX2-202ENST00000397643 SLC26A2P50443 739 aa18.38■□□□□ 0.53
CUX2-202ENST00000397643 TMTC3Q6ZXV5 915 aa18.38■□□□□ 0.53
CUX2-202ENST00000397643 SLC24A5Q71RS6 500 aa18.38■□□□□ 0.53
CUX2-202ENST00000397643 RAB11FIP4Q86YS3 637 aa18.38■□□□□ 0.53
CUX2-202ENST00000397643 RASGRP4Q8TDF6 673 aa18.38■□□□□ 0.53
CUX2-202ENST00000397643 SDF4Q9BRK5 362 aa18.38■□□□□ 0.53
CUX2-202ENST00000397643 AAASQ9NRG9 546 aa18.38■□□□□ 0.53
CUX2-202ENST00000397643 TYW1Q9NV66 732 aaKnown RBP18.38■□□□□ 0.53
CUX2-202ENST00000397643 TMEM260Q9NX78 707 aa18.38■□□□□ 0.53
CUX2-202ENST00000397643 ST3GAL5Q9UNP4 418 aa18.38■□□□□ 0.53
CUX2-202ENST00000397643 RBM8AQ9Y5S9 174 aaKnown RBP18.38■□□□□ 0.53
CUX2-202ENST00000397643 PTPRZ1P23471 2315 aaPredicted RBP18.37■□□□□ 0.53
CUX2-202ENST00000397643 GFRA3O60609 400 aa18.37■□□□□ 0.53
CUX2-202ENST00000397643 FGFR1P11362 822 aa18.37■□□□□ 0.53
CUX2-202ENST00000397643 APOBRQ0VD83 1088 aa18.37■□□□□ 0.53
CUX2-202ENST00000397643 CEP55Q53EZ4 464 aa18.37■□□□□ 0.53
CUX2-202ENST00000397643 SPOUT1Q5T280 376 aaKnown RBP18.37■□□□□ 0.53
CUX2-202ENST00000397643 PDE12Q6L8Q7 609 aaKnown RBP18.37■□□□□ 0.53
CUX2-202ENST00000397643 ANKRD54Q6NXT1 300 aa18.37■□□□□ 0.53
CUX2-202ENST00000397643 CASC1Q6TDU7 716 aa18.37■□□□□ 0.53
CUX2-202ENST00000397643 HEATR3Q7Z4Q2 680 aa18.37■□□□□ 0.53
CUX2-202ENST00000397643 SKAP1Q86WV1 359 aa18.37■□□□□ 0.53
CUX2-202ENST00000397643 THNSL1Q8IYQ7 743 aa18.37■□□□□ 0.53
CUX2-202ENST00000397643 PGBD1Q96JS3 809 aa18.37■□□□□ 0.53
CUX2-202ENST00000397643 LZTS1Q9Y250 596 aa18.37■□□□□ 0.53
CUX2-202ENST00000397643 EVPLQ92817 2033 aa18.37■□□□□ 0.53
CUX2-202ENST00000397643 RIF1Q5UIP0 2472 aaKnown RBP18.37■□□□□ 0.53
CUX2-202ENST00000397643 DENND3A2RUS2 1198 aa18.36■□□□□ 0.53
CUX2-202ENST00000397643 CCDC69A6NI79 296 aa18.36■□□□□ 0.53
CUX2-202ENST00000397643 HIDE1A8MVS5 230 aa18.36■□□□□ 0.53
CUX2-202ENST00000397643 COL1A2P08123 1366 aa18.36■□□□□ 0.53
CUX2-202ENST00000397643 TECP42680 631 aa18.36■□□□□ 0.53
CUX2-202ENST00000397643 LIFRP42702 1097 aa18.36■□□□□ 0.53
CUX2-202ENST00000397643 FAM189BP81408 668 aa18.36■□□□□ 0.53
CUX2-202ENST00000397643 PLCB3Q01970 1234 aa18.36■□□□□ 0.53
CUX2-202ENST00000397643 DSC3Q14574 896 aa18.36■□□□□ 0.53
CUX2-202ENST00000397643 PLPP4Q5VZY2 271 aa18.36■□□□□ 0.53
CUX2-202ENST00000397643 WWC2Q6AWC2 1192 aa18.36■□□□□ 0.53
CUX2-202ENST00000397643 ABHD15Q6UXT9 468 aa18.36■□□□□ 0.53
CUX2-202ENST00000397643 NFXL1Q6ZNB6 911 aa18.36■□□□□ 0.53
CUX2-202ENST00000397643 FAM228AQ86W67 206 aa18.36■□□□□ 0.53
CUX2-202ENST00000397643 CCDC60Q8IWA6 550 aaPredicted RBP18.36■□□□□ 0.53
CUX2-202ENST00000397643 CCDC82Q8N4S0 544 aa18.36■□□□□ 0.53
CUX2-202ENST00000397643 TMEM87BQ96K49 555 aa18.36■□□□□ 0.53
CUX2-202ENST00000397643 RNF19AQ9NV58 838 aa18.36■□□□□ 0.53
CUX2-202ENST00000397643 TMEM161AQ9NX61 479 aa18.36■□□□□ 0.53
CUX2-202ENST00000397643 CDH22Q9UJ99 828 aa18.36■□□□□ 0.53
CUX2-202ENST00000397643 CNTNAP5Q8WYK1 1306 aa18.35■□□□□ 0.53
CUX2-202ENST00000397643 MEIS1O00470 390 aa18.35■□□□□ 0.53
CUX2-202ENST00000397643 HBP1O60381 514 aa18.35■□□□□ 0.53
CUX2-202ENST00000397643 CALM1P0DP23 149 aa18.35■□□□□ 0.53
CUX2-202ENST00000397643 CALM2P0DP24 149 aa18.35■□□□□ 0.53
CUX2-202ENST00000397643 CALM3P0DP25 149 aa18.35■□□□□ 0.53
CUX2-202ENST00000397643 LAG3P18627 525 aa18.35■□□□□ 0.53
CUX2-202ENST00000397643 ATP4AP20648 1035 aa18.35■□□□□ 0.53
CUX2-202ENST00000397643 MCM5P33992 734 aa18.35■□□□□ 0.53
CUX2-202ENST00000397643 LRRC55Q6ZSA7 311 aa18.35■□□□□ 0.53
CUX2-202ENST00000397643 TMTC2Q8N394 836 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms