RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 C5orf60A6NFR6 353 aa9.98□□□□□ -0.81
CAPN3-206ENST00000397163 HGSO14964 777 aaPredicted RBP9.98□□□□□ -0.81
CAPN3-206ENST00000397163 RASA1P20936 1047 aa9.98□□□□□ -0.81
CAPN3-206ENST00000397163 HOXA7P31268 230 aaPredicted RBP9.98□□□□□ -0.81
CAPN3-206ENST00000397163 SLC8A1P32418 973 aa9.98□□□□□ -0.81
CAPN3-206ENST00000397163 PDIA5Q14554 519 aa9.98□□□□□ -0.81
CAPN3-206ENST00000397163 SF3B3Q15393 1217 aaKnown RBP9.98□□□□□ -0.81
CAPN3-206ENST00000397163 ECM1Q16610 540 aa9.98□□□□□ -0.81
CAPN3-206ENST00000397163 TMEM119Q4V9L6 283 aa9.98□□□□□ -0.81
CAPN3-206ENST00000397163 FAM133BQ5BKY9 247 aaKnown RBP9.98□□□□□ -0.81
CAPN3-206ENST00000397163 SPTY2D1Q68D10 685 aaPredicted RBP9.98□□□□□ -0.81
CAPN3-206ENST00000397163 TMC3Q7Z5M5 1100 aa9.98□□□□□ -0.81
CAPN3-206ENST00000397163 CCDC65Q8IXS2 484 aa9.98□□□□□ -0.81
CAPN3-206ENST00000397163 GJA10Q969M2 543 aa9.98□□□□□ -0.81
CAPN3-206ENST00000397163 COA7Q96BR5 231 aa9.98□□□□□ -0.81
CAPN3-206ENST00000397163 DNAJC19Q96DA6 116 aa9.98□□□□□ -0.81
CAPN3-206ENST00000397163 UIMC1Q96RL1 719 aa9.98□□□□□ -0.81
CAPN3-206ENST00000397163 EYA3Q99504 573 aa9.98□□□□□ -0.81
CAPN3-206ENST00000397163 PLCD4Q9BRC7 762 aa9.98□□□□□ -0.81
CAPN3-206ENST00000397163 COL4A1P02462 1669 aa9.98□□□□□ -0.81
CAPN3-206ENST00000397163 CETN3O15182 167 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 CTNND1O60716 968 aaKnown RBP9.97□□□□□ -0.81
CAPN3-206ENST00000397163 DIAPH2O60879 1101 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 FLOT1O75955 427 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 KRT18P05783 430 aaKnown RBP9.97□□□□□ -0.81
CAPN3-206ENST00000397163 PAEPP09466 180 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 NT5C2P49902 561 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 BYSLQ13895 437 aaKnown RBP9.97□□□□□ -0.81
CAPN3-206ENST00000397163 FOXR2Q6PJQ5 311 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 LRRC57Q8N9N7 239 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 TPCN2Q8NHX9 752 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 ZNF570Q96NI8 536 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 GOPCQ9HD26 462 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 NAGPAQ9UK23 515 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 A0A1B0GUL6 1792 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 BTNL10A8MVZ5 291 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 F8VZ95 297 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 LDHBP07195 334 aaKnown RBP9.97□□□□□ -0.81
CAPN3-206ENST00000397163 SLC9A1P19634 815 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 DRD4P21917 467 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 ADCY7P51828 1080 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 RPS8P62241 208 aaKnown RBP9.97□□□□□ -0.81
CAPN3-206ENST00000397163 PRPF4BQ13523 1007 aaKnown RBP9.97□□□□□ -0.81
CAPN3-206ENST00000397163 DIXDC1Q155Q3 683 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 DDB1Q16531 1140 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 DAAM2Q86T65 1068 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 CCDC197Q8NCU1 140 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 CUL5Q93034 780 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 CHMP6Q96FZ7 201 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 XPO6Q96QU8 1125 aaKnown RBP9.97□□□□□ -0.81
CAPN3-206ENST00000397163 SELENOSQ9BQE4 189 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 SLITRK6Q9H5Y7 841 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 CNOT10Q9H9A5 744 aaKnown RBP9.97□□□□□ -0.81
CAPN3-206ENST00000397163 LRRC4CQ9HCJ2 640 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 FAM114A2Q9NRY5 505 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 RREB1Q92766 1687 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 FRMPD2Q68DX3 1309 aaPredicted RBP9.97□□□□□ -0.81
CAPN3-206ENST00000397163 NPHP3-ACAD11A0A0J9YXS1 232 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 TLDC2A0PJX2 215 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 BAG3O95817 575 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 H2AFZP0C0S5 128 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 SEPT2Q15019 361 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 GNPTABQ3T906 1256 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 LACTB2Q53H82 288 aaPredicted RBP9.97□□□□□ -0.81
CAPN3-206ENST00000397163 CDCA2Q69YH5 1023 aaPredicted RBP9.97□□□□□ -0.81
CAPN3-206ENST00000397163 H2AFVQ71UI9 128 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 IRF2BP2Q7Z5L9 587 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 VPS36Q86VN1 386 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 KCNV2Q8TDN2 545 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 P3H4Q92791 437 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 ACSBG1Q96GR2 724 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 TRIM51Q9BSJ1 452 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 ZNF287Q9HBT7 754 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 EMILIN3Q9NT22 766 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 HDAC9Q9UKV0 1011 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 PNMA2Q9UL42 364 aa9.97□□□□□ -0.81
CAPN3-206ENST00000397163 BZW2Q9Y6E2 419 aaKnown RBP9.97□□□□□ -0.81
CAPN3-206ENST00000397163 LOC102724428A0A0B4J2F2 783 aa9.96□□□□□ -0.81
CAPN3-206ENST00000397163 A8MUI8 341 aa9.96□□□□□ -0.81
CAPN3-206ENST00000397163 E9PMD0 336 aa9.96□□□□□ -0.81
CAPN3-206ENST00000397163 SNUPNO95149 360 aaKnown RBP9.96□□□□□ -0.81
CAPN3-206ENST00000397163 UCHL3P15374 230 aa9.96□□□□□ -0.81
CAPN3-206ENST00000397163 NR2F2P24468 414 aa9.96□□□□□ -0.81
CAPN3-206ENST00000397163 SIK1P57059 783 aa9.96□□□□□ -0.81
CAPN3-206ENST00000397163 XRCC4Q13426 336 aa9.96□□□□□ -0.81
CAPN3-206ENST00000397163 TXNRD3Q86VQ6 643 aa9.96□□□□□ -0.81
CAPN3-206ENST00000397163 HOOK3Q86VS8 718 aa9.96□□□□□ -0.81
CAPN3-206ENST00000397163 GPBP1Q86WP2 473 aa9.96□□□□□ -0.81
CAPN3-206ENST00000397163 ANKS4BQ8N8V4 417 aa9.96□□□□□ -0.81
CAPN3-206ENST00000397163 CCT6BQ92526 530 aa9.96□□□□□ -0.81
CAPN3-206ENST00000397163 BORCS6Q96GS4 357 aa9.96□□□□□ -0.81
CAPN3-206ENST00000397163 FMO2Q99518 471 aa9.96□□□□□ -0.81
CAPN3-206ENST00000397163 ESYT2A0FGR8 921 aa9.96□□□□□ -0.82
CAPN3-206ENST00000397163 SMIM23A6NLE4 172 aa9.96□□□□□ -0.82
CAPN3-206ENST00000397163 USP17L5A8MUK1 530 aa9.96□□□□□ -0.82
CAPN3-206ENST00000397163 TRIM37O94972 964 aa9.96□□□□□ -0.82
CAPN3-206ENST00000397163 ITPK1Q13572 414 aa9.96□□□□□ -0.82
CAPN3-206ENST00000397163 EXOC3L4Q17RC7 722 aa9.96□□□□□ -0.82
CAPN3-206ENST00000397163 DCAF17Q5H9S7 520 aaPredicted RBP9.96□□□□□ -0.82
CAPN3-206ENST00000397163 TCERG1LQ5VWI1 586 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms