RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 MCTP2Q6DN12 878 aa19.61■□□□□ 0.73
TNFSF13-205ENST00000396545 KRT25Q7Z3Z0 450 aa19.61■□□□□ 0.73
TNFSF13-205ENST00000396545 INPP4AQ96PE3 977 aaPredicted RBP19.61■□□□□ 0.73
TNFSF13-205ENST00000396545 BCAS3Q9H6U6 928 aa19.61■□□□□ 0.73
TNFSF13-205ENST00000396545 CBX8Q9HC52 389 aa19.61■□□□□ 0.73
TNFSF13-205ENST00000396545 USP25Q9UHP3 1055 aa19.61■□□□□ 0.73
TNFSF13-205ENST00000396545 COL4A4P53420 1690 aaPredicted RBP19.61■□□□□ 0.73
TNFSF13-205ENST00000396545 CCDC194A0A1B0GVG4 234 aa19.61■□□□□ 0.73
TNFSF13-205ENST00000396545 FAM205CA6NFA0 338 aa19.61■□□□□ 0.73
TNFSF13-205ENST00000396545 RBAK-RBAKDNI3L0D1 243 aa19.61■□□□□ 0.73
TNFSF13-205ENST00000396545 STAM2O75886 525 aa19.61■□□□□ 0.73
TNFSF13-205ENST00000396545 ICAM3P32942 547 aa19.61■□□□□ 0.73
TNFSF13-205ENST00000396545 SKIV2LQ15477 1246 aaKnown RBP19.61■□□□□ 0.73
TNFSF13-205ENST00000396545 AAK1Q2M2I8 961 aa19.61■□□□□ 0.73
TNFSF13-205ENST00000396545 GNPTABQ3T906 1256 aa19.61■□□□□ 0.73
TNFSF13-205ENST00000396545 TYW1BQ6NUM6 668 aa19.61■□□□□ 0.73
TNFSF13-205ENST00000396545 CLIC6Q96NY7 704 aa19.61■□□□□ 0.73
TNFSF13-205ENST00000396545 SDF4Q9BRK5 362 aa19.61■□□□□ 0.73
TNFSF13-205ENST00000396545 ZBED2Q9BTP6 218 aa19.61■□□□□ 0.73
TNFSF13-205ENST00000396545 SRPRBQ9Y5M8 271 aaKnown RBP19.61■□□□□ 0.73
TNFSF13-205ENST00000396545 EMSYQ7Z589 1322 aa19.6■□□□□ 0.73
TNFSF13-205ENST00000396545 H3BRB1 525 aa19.6■□□□□ 0.73
TNFSF13-205ENST00000396545 LGR5O75473 907 aa19.6■□□□□ 0.73
TNFSF13-205ENST00000396545 LGALS2P05162 132 aa19.6■□□□□ 0.73
TNFSF13-205ENST00000396545 SYKP43405 635 aa19.6■□□□□ 0.73
TNFSF13-205ENST00000396545 SEMA3FQ13275 785 aa19.6■□□□□ 0.73
TNFSF13-205ENST00000396545 MKRN4PQ13434 485 aaPredicted RBP19.6■□□□□ 0.73
TNFSF13-205ENST00000396545 IKBKEQ14164 716 aa19.6■□□□□ 0.73
TNFSF13-205ENST00000396545 METTL7BQ6UX53 244 aa19.6■□□□□ 0.73
TNFSF13-205ENST00000396545 ELOA2Q8IYF1 753 aaPredicted RBP19.6■□□□□ 0.73
TNFSF13-205ENST00000396545 RAD9AQ99638 391 aa19.6■□□□□ 0.73
TNFSF13-205ENST00000396545 TUT1Q9H6E5 874 aaKnown RBP19.6■□□□□ 0.73
TNFSF13-205ENST00000396545 SPATA31C2B4DYI2 1134 aa19.59■□□□□ 0.73
TNFSF13-205ENST00000396545 THPOP40225 353 aa19.59■□□□□ 0.73
TNFSF13-205ENST00000396545 ADCY7P51828 1080 aa19.59■□□□□ 0.73
TNFSF13-205ENST00000396545 DNAJC25Q9H1X3 360 aa19.59■□□□□ 0.73
TNFSF13-205ENST00000396545 RIC8AQ9NPQ8 531 aa19.59■□□□□ 0.73
TNFSF13-205ENST00000396545 KIAA1468Q9P260 1216 aa19.59■□□□□ 0.73
TNFSF13-205ENST00000396545 BRWD1Q9NSI6 2320 aa19.59■□□□□ 0.73
TNFSF13-205ENST00000396545 C17orf102A2RUQ5 167 aa19.58■□□□□ 0.73
TNFSF13-205ENST00000396545 NOP56O00567 594 aaKnown RBP19.58■□□□□ 0.73
TNFSF13-205ENST00000396545 SMIM10L2AP0DMW4 78 aa19.58■□□□□ 0.73
TNFSF13-205ENST00000396545 SMIM10L2BP0DMW5 78 aa19.58■□□□□ 0.73
TNFSF13-205ENST00000396545 ZNF165P49910 485 aa19.58■□□□□ 0.73
TNFSF13-205ENST00000396545 KCNQ1P51787 676 aa19.58■□□□□ 0.73
TNFSF13-205ENST00000396545 ORC2Q13416 577 aaPredicted RBP19.58■□□□□ 0.73
TNFSF13-205ENST00000396545 NEDD9Q14511 834 aa19.58■□□□□ 0.73
TNFSF13-205ENST00000396545 REXO1Q8N1G1 1221 aaKnown RBP19.58■□□□□ 0.73
TNFSF13-205ENST00000396545 CUL5Q93034 780 aa19.58■□□□□ 0.73
TNFSF13-205ENST00000396545 ATP6V0A1Q93050 837 aa19.58■□□□□ 0.73
TNFSF13-205ENST00000396545 ANO10Q9NW15 660 aa19.58■□□□□ 0.73
TNFSF13-205ENST00000396545 PCDHA6Q9UN73 950 aa19.58■□□□□ 0.73
TNFSF13-205ENST00000396545 PCDHA8Q9Y5H6 950 aa19.58■□□□□ 0.73
TNFSF13-205ENST00000396545 TCF20Q9UGU0 1960 aaKnown RBP19.58■□□□□ 0.72
TNFSF13-205ENST00000396545 ESPNB1AK53 854 aa19.57■□□□□ 0.72
TNFSF13-205ENST00000396545 RSPH10B2B2RC85 870 aa19.57■□□□□ 0.72
TNFSF13-205ENST00000396545 PIK3CDO00329 1044 aa19.57■□□□□ 0.72
TNFSF13-205ENST00000396545 AP5Z1O43299 807 aa19.57■□□□□ 0.72
TNFSF13-205ENST00000396545 ADCY5O95622 1261 aa19.57■□□□□ 0.72
TNFSF13-205ENST00000396545 RSPH10BP0C881 870 aa19.57■□□□□ 0.72
TNFSF13-205ENST00000396545 PIK3AP1Q6ZUJ8 805 aa19.57■□□□□ 0.72
TNFSF13-205ENST00000396545 CYFIP1Q7L576 1253 aa19.57■□□□□ 0.72
TNFSF13-205ENST00000396545 LUZP1Q86V48 1076 aa19.57■□□□□ 0.72
TNFSF13-205ENST00000396545 NECAB3Q96P71 396 aaPredicted RBP19.57■□□□□ 0.72
TNFSF13-205ENST00000396545 GPR20Q99678 358 aa19.57■□□□□ 0.72
TNFSF13-205ENST00000396545 RRAGDQ9NQL2 400 aaPredicted RBP19.57■□□□□ 0.72
TNFSF13-205ENST00000396545 COG5Q9UP83 839 aa19.57■□□□□ 0.72
TNFSF13-205ENST00000396545 LINC01553A4QN01 128 aa19.57■□□□□ 0.72
TNFSF13-205ENST00000396545 MEIS2O14770 477 aa19.57■□□□□ 0.72
TNFSF13-205ENST00000396545 ERVK-21P61565 698 aa19.57■□□□□ 0.72
TNFSF13-205ENST00000396545 GRIN1Q05586 938 aa19.57■□□□□ 0.72
TNFSF13-205ENST00000396545 IQCB1Q15051 598 aa19.57■□□□□ 0.72
TNFSF13-205ENST00000396545 TTC38Q5R3I4 469 aa19.57■□□□□ 0.72
TNFSF13-205ENST00000396545 PCNX4Q63HM2 1172 aa19.57■□□□□ 0.72
TNFSF13-205ENST00000396545 USP17L6PQ6QN14 398 aa19.57■□□□□ 0.72
TNFSF13-205ENST00000396545 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.57■□□□□ 0.72
TNFSF13-205ENST00000396545 C11orf57Q6ZUT1 292 aaPredicted RBP19.57■□□□□ 0.72
TNFSF13-205ENST00000396545 DBF4BQ8NFT6 615 aa19.57■□□□□ 0.72
TNFSF13-205ENST00000396545 GDPD5Q8WTR4 605 aa19.57■□□□□ 0.72
TNFSF13-205ENST00000396545 TGS1Q96RS0 853 aaKnown RBP19.57■□□□□ 0.72
TNFSF13-205ENST00000396545 RNPEPQ9H4A4 650 aa19.57■□□□□ 0.72
TNFSF13-205ENST00000396545 LMCD1Q9NZU5 365 aa19.57■□□□□ 0.72
TNFSF13-205ENST00000396545 KCNH3Q9ULD8 1083 aa19.57■□□□□ 0.72
TNFSF13-205ENST00000396545 MICAL3Q7RTP6 2002 aa19.56■□□□□ 0.72
TNFSF13-205ENST00000396545 DOCK5Q9H7D0 1870 aa19.56■□□□□ 0.72
TNFSF13-205ENST00000396545 WNT7AO00755 349 aa19.56■□□□□ 0.72
TNFSF13-205ENST00000396545 TREHO43280 583 aa19.56■□□□□ 0.72
TNFSF13-205ENST00000396545 NONOQ15233 471 aaKnown RBP eCLIP19.56■□□□□ 0.72
TNFSF13-205ENST00000396545 PLEKHG4Q58EX7 1191 aa19.56■□□□□ 0.72
TNFSF13-205ENST00000396545 XRRA1Q6P2D8 792 aa19.56■□□□□ 0.72
TNFSF13-205ENST00000396545 SENP7Q9BQF6 1050 aa19.56■□□□□ 0.72
TNFSF13-205ENST00000396545 PSTPIP2Q9H939 334 aa19.56■□□□□ 0.72
TNFSF13-205ENST00000396545 SUGCTQ9HAC7 445 aa19.56■□□□□ 0.72
TNFSF13-205ENST00000396545 FAM13BQ9NYF5 915 aa19.56■□□□□ 0.72
TNFSF13-205ENST00000396545 CCDC39Q9UFE4 941 aa19.56■□□□□ 0.72
TNFSF13-205ENST00000396545 MTUS1Q9ULD2 1270 aa19.56■□□□□ 0.72
TNFSF13-205ENST00000396545 SIP14410 1827 aa19.55■□□□□ 0.72
TNFSF13-205ENST00000396545 ADAMTS3O15072 1205 aa19.55■□□□□ 0.72
TNFSF13-205ENST00000396545 CAND2O75155 1236 aa19.55■□□□□ 0.72
TNFSF13-205ENST00000396545 FAM117BQ6P1L5 589 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms