RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 MUC3AQ02505 3323 aa20.71■□□□□ 0.91
FXN-203ENST00000396366 COL1A2P08123 1366 aa20.71■□□□□ 0.91
FXN-203ENST00000396366 PFKFB2O60825 505 aa20.7■□□□□ 0.9
FXN-203ENST00000396366 CTDNEP1O95476 244 aa20.7■□□□□ 0.9
FXN-203ENST00000396366 SEC24BO95487 1268 aa20.7■□□□□ 0.9
FXN-203ENST00000396366 BMP1P13497 986 aa20.7■□□□□ 0.9
FXN-203ENST00000396366 AK2P54819 239 aa20.7■□□□□ 0.9
FXN-203ENST00000396366 PAK2Q13177 524 aa20.7■□□□□ 0.9
FXN-203ENST00000396366 UGCGQ16739 394 aa20.7■□□□□ 0.9
FXN-203ENST00000396366 DAGLBQ8NCG7 672 aa20.7■□□□□ 0.9
FXN-203ENST00000396366 TMEM40Q8WWA1 233 aa20.7■□□□□ 0.9
FXN-203ENST00000396366 UNC45AQ9H3U1 944 aa20.7■□□□□ 0.9
FXN-203ENST00000396366 RC3H2Q9HBD1 1191 aaKnown RBP20.7■□□□□ 0.9
FXN-203ENST00000396366 DISC1Q9NRI5 854 aa20.7■□□□□ 0.9
FXN-203ENST00000396366 TCEAL9Q9UHQ7 104 aa20.7■□□□□ 0.9
FXN-203ENST00000396366 NOC2LQ9Y3T9 749 aaKnown RBP20.7■□□□□ 0.9
FXN-203ENST00000396366 SQORQ9Y6N5 450 aa20.7■□□□□ 0.9
FXN-203ENST00000396366 WDR64B1ANS9 1081 aa20.69■□□□□ 0.9
FXN-203ENST00000396366 ZNF862O60290 1169 aa20.69■□□□□ 0.9
FXN-203ENST00000396366 GAS7O60861 476 aa20.69■□□□□ 0.9
FXN-203ENST00000396366 LINC00271P0C7V0 271 aa20.69■□□□□ 0.9
FXN-203ENST00000396366 GPM6BQ13491 265 aa20.69■□□□□ 0.9
FXN-203ENST00000396366 Q4G0T1 1027 aa20.69■□□□□ 0.9
FXN-203ENST00000396366 LRCH2Q5VUJ6 765 aa20.69■□□□□ 0.9
FXN-203ENST00000396366 CRIPAKQ8N1N5 446 aa20.69■□□□□ 0.9
FXN-203ENST00000396366 FIBCD1Q8N539 461 aa20.69■□□□□ 0.9
FXN-203ENST00000396366 METTL13Q8N6R0 699 aa20.69■□□□□ 0.9
FXN-203ENST00000396366 NECAB1Q8N987 351 aa20.69■□□□□ 0.9
FXN-203ENST00000396366 NECAB3Q96P71 396 aaPredicted RBP20.69■□□□□ 0.9
FXN-203ENST00000396366 RIT2Q99578 217 aa20.69■□□□□ 0.9
FXN-203ENST00000396366 COL4A6Q14031 1691 aa20.69■□□□□ 0.9
FXN-203ENST00000396366 KDM3AQ9Y4C1 1321 aa20.69■□□□□ 0.9
FXN-203ENST00000396366 CYP3A7-CYP3A51PA0A087WV96 503 aa20.68■□□□□ 0.9
FXN-203ENST00000396366 H3BNC9 293 aa20.68■□□□□ 0.9
FXN-203ENST00000396366 PSMD10O75832 226 aa20.68■□□□□ 0.9
FXN-203ENST00000396366 VTNP04004 478 aa20.68■□□□□ 0.9
FXN-203ENST00000396366 IBSPP21815 317 aaPredicted RBP20.68■□□□□ 0.9
FXN-203ENST00000396366 CYP3A7P24462 503 aa20.68■□□□□ 0.9
FXN-203ENST00000396366 ANAPC15P60006 121 aa20.68■□□□□ 0.9
FXN-203ENST00000396366 NFX1Q12986 1120 aaKnown RBP20.68■□□□□ 0.9
FXN-203ENST00000396366 INF2Q27J81 1249 aa20.68■□□□□ 0.9
FXN-203ENST00000396366 KIZQ2M2Z5 673 aa20.68■□□□□ 0.9
FXN-203ENST00000396366 OXER1Q8TDS5 423 aa20.68■□□□□ 0.9
FXN-203ENST00000396366 HLA-CQ95604 372 aa20.68■□□□□ 0.9
FXN-203ENST00000396366 ZNF689Q96CS4 500 aaPredicted RBP20.68■□□□□ 0.9
FXN-203ENST00000396366 PHF20Q9BVI0 1012 aa20.68■□□□□ 0.9
FXN-203ENST00000396366 BDP1A6H8Y1 2624 aa20.68■□□□□ 0.9
FXN-203ENST00000396366 MGEA5O60502 916 aa20.67■□□□□ 0.9
FXN-203ENST00000396366 DGKIO75912 1065 aa20.67■□□□□ 0.9
FXN-203ENST00000396366 LARGE1O95461 756 aa20.67■□□□□ 0.9
FXN-203ENST00000396366 GATMP50440 423 aa20.67■□□□□ 0.9
FXN-203ENST00000396366 CLCN3P51790 818 aa20.67■□□□□ 0.9
FXN-203ENST00000396366 NONOQ15233 471 aaKnown RBP eCLIP20.67■□□□□ 0.9
FXN-203ENST00000396366 GALNT17Q6IS24 598 aa20.67■□□□□ 0.9
FXN-203ENST00000396366 SAMD11Q96NU1 681 aa20.67■□□□□ 0.9
FXN-203ENST00000396366 TEKT3Q9BXF9 490 aa20.67■□□□□ 0.9
FXN-203ENST00000396366 FTHL17Q9BXU8 183 aa20.67■□□□□ 0.9
FXN-203ENST00000396366 C22orf23Q9BZE7 217 aa20.67■□□□□ 0.9
FXN-203ENST00000396366 ERVK-5Q9HDB9 667 aa20.67■□□□□ 0.9
FXN-203ENST00000396366 COG5Q9UP83 839 aa20.67■□□□□ 0.9
FXN-203ENST00000396366 ADGRA3Q8IWK6 1321 aa20.67■□□□□ 0.9
FXN-203ENST00000396366 BRWD1Q9NSI6 2320 aa20.66■□□□□ 0.9
FXN-203ENST00000396366 GPR32O75388 356 aa20.66■□□□□ 0.9
FXN-203ENST00000396366 RPS6KA5O75582 802 aa20.66■□□□□ 0.9
FXN-203ENST00000396366 CDKL5O76039 1030 aa20.66■□□□□ 0.9
FXN-203ENST00000396366 OATP04181 439 aa20.66■□□□□ 0.9
FXN-203ENST00000396366 FDPSP14324 419 aaKnown RBP20.66■□□□□ 0.9
FXN-203ENST00000396366 CTNNB1P35222 781 aa20.66■□□□□ 0.9
FXN-203ENST00000396366 PRKCEQ02156 737 aa20.66■□□□□ 0.9
FXN-203ENST00000396366 BTG3Q14201 252 aaPredicted RBP20.66■□□□□ 0.9
FXN-203ENST00000396366 ME3Q16798 604 aa20.66■□□□□ 0.9
FXN-203ENST00000396366 LRRC71Q8N4P6 559 aa20.66■□□□□ 0.9
FXN-203ENST00000396366 IL27Q8NEV9 243 aa20.66■□□□□ 0.9
FXN-203ENST00000396366 ETNPPLQ8TBG4 499 aa20.66■□□□□ 0.9
FXN-203ENST00000396366 MBOAT7Q96N66 472 aa20.66■□□□□ 0.9
FXN-203ENST00000396366 UHRF1Q96T88 793 aaPredicted RBP20.66■□□□□ 0.9
FXN-203ENST00000396366 OSMRQ99650 979 aa20.66■□□□□ 0.9
FXN-203ENST00000396366 ST3GAL5Q9UNP4 418 aa20.66■□□□□ 0.9
FXN-203ENST00000396366 RALGAPA2Q2PPJ7 1873 aa20.66■□□□□ 0.9
FXN-203ENST00000396366 STK36Q9NRP7 1315 aa20.65■□□□□ 0.9
FXN-203ENST00000396366 TMEM150BA6NC51 233 aa20.65■□□□□ 0.9
FXN-203ENST00000396366 TNFRSF10AO00220 468 aa20.65■□□□□ 0.9
FXN-203ENST00000396366 SLC37A4O43826 429 aa20.65■□□□□ 0.9
FXN-203ENST00000396366 BMPR1AP36894 532 aa20.65■□□□□ 0.9
FXN-203ENST00000396366 LETM2Q2VYF4 491 aa20.65■□□□□ 0.9
FXN-203ENST00000396366 EFCAB12Q6NXP0 572 aa20.65■□□□□ 0.9
FXN-203ENST00000396366 B3GNT9Q6UX72 402 aa20.65■□□□□ 0.9
FXN-203ENST00000396366 MIER3Q7Z3K6 550 aa20.65■□□□□ 0.9
FXN-203ENST00000396366 KRT25Q7Z3Z0 450 aa20.65■□□□□ 0.9
FXN-203ENST00000396366 MRPL38Q96DV4 380 aaKnown RBP20.65■□□□□ 0.9
FXN-203ENST00000396366 ZNF668Q96K58 619 aaPredicted RBP20.65■□□□□ 0.9
FXN-203ENST00000396366 SH2D3AQ9BRG2 576 aa20.65■□□□□ 0.9
FXN-203ENST00000396366 NRBP2Q9NSY0 501 aa20.65■□□□□ 0.9
FXN-203ENST00000396366 MYO7AQ13402 2215 aa20.64■□□□□ 0.89
FXN-203ENST00000396366 STBD1O95210 358 aa20.64■□□□□ 0.89
FXN-203ENST00000396366 SFNP31947 248 aa20.64■□□□□ 0.89
FXN-203ENST00000396366 JAK3P52333 1124 aa20.64■□□□□ 0.89
FXN-203ENST00000396366 CRYBB1P53674 252 aaPredicted RBP20.64■□□□□ 0.89
FXN-203ENST00000396366 AAK1Q2M2I8 961 aa20.64■□□□□ 0.89
FXN-203ENST00000396366 PAN2Q504Q3 1202 aaKnown RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms