RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 SLFN12Q8IYM2 578 aa9.64□□□□□ -0.87
APLF-202ENST00000394342 GJA10Q969M2 543 aa9.64□□□□□ -0.87
APLF-202ENST00000394342 GABBR1Q9UBS5 961 aa9.64□□□□□ -0.87
APLF-202ENST00000394342 VAV3Q9UKW4 847 aa9.64□□□□□ -0.87
APLF-202ENST00000394342 CEP131Q9UPN4 1083 aa9.64□□□□□ -0.87
APLF-202ENST00000394342 PCDHA2Q9Y5H9 948 aa9.64□□□□□ -0.87
APLF-202ENST00000394342 MYO7AQ13402 2215 aa9.64□□□□□ -0.87
APLF-202ENST00000394342 SPTBN5Q9NRC6 3674 aaKnown RBP9.63□□□□□ -0.87
APLF-202ENST00000394342 SMIM35A0A1B0GVV1 85 aa9.63□□□□□ -0.87
APLF-202ENST00000394342 ZBBXA8MT70 800 aa9.63□□□□□ -0.87
APLF-202ENST00000394342 ZBTB42B2RXF5 422 aa9.63□□□□□ -0.87
APLF-202ENST00000394342 MARCH6O60337 910 aa9.63□□□□□ -0.87
APLF-202ENST00000394342 EFCAB14O75071 495 aa9.63□□□□□ -0.87
APLF-202ENST00000394342 SLC34A2O95436 690 aa9.63□□□□□ -0.87
APLF-202ENST00000394342 ORC2Q13416 577 aaPredicted RBP9.63□□□□□ -0.87
APLF-202ENST00000394342 PDAP1Q13442 181 aaKnown RBP9.63□□□□□ -0.87
APLF-202ENST00000394342 MBTPS1Q14703 1052 aa9.63□□□□□ -0.87
APLF-202ENST00000394342 MTHFD1LQ6UB35 978 aa9.63□□□□□ -0.87
APLF-202ENST00000394342 CKAP2LQ8IYA6 745 aa9.63□□□□□ -0.87
APLF-202ENST00000394342 NME8Q8N427 588 aa9.63□□□□□ -0.87
APLF-202ENST00000394342 TRAPPC12Q8WVT3 735 aa9.63□□□□□ -0.87
APLF-202ENST00000394342 HAS1Q92839 578 aa9.63□□□□□ -0.87
APLF-202ENST00000394342 NRBP2Q9NSY0 501 aa9.63□□□□□ -0.87
APLF-202ENST00000394342 CXXC1Q9P0U4 656 aaPredicted RBP9.63□□□□□ -0.87
APLF-202ENST00000394342 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.63□□□□□ -0.87
APLF-202ENST00000394342 SLC4A7Q9Y6M7 1214 aa9.63□□□□□ -0.87
APLF-202ENST00000394342 PRRC2BQ5JSZ5 2229 aaKnown RBP9.63□□□□□ -0.87
APLF-202ENST00000394342 UNC80Q8N2C7 3258 aa9.62□□□□□ -0.87
APLF-202ENST00000394342 TDRD15B5MCY1 1934 aaKnown RBP9.62□□□□□ -0.87
APLF-202ENST00000394342 A0A0C4DFX4 3053 aa9.62□□□□□ -0.87
APLF-202ENST00000394342 COL4A4P53420 1690 aaPredicted RBP9.62□□□□□ -0.87
APLF-202ENST00000394342 TMEM265A0A087WTH1 108 aa9.62□□□□□ -0.87
APLF-202ENST00000394342 ABHD14A-ACY1A0A1B0GW23 586 aa9.62□□□□□ -0.87
APLF-202ENST00000394342 ZNF862O60290 1169 aa9.62□□□□□ -0.87
APLF-202ENST00000394342 NEMFO60524 1076 aa9.62□□□□□ -0.87
APLF-202ENST00000394342 DKC1O60832 514 aaKnown RBP eCLIP9.62□□□□□ -0.87
APLF-202ENST00000394342 CHRNA1P02708 482 aa9.62□□□□□ -0.87
APLF-202ENST00000394342 OATP04181 439 aa9.62□□□□□ -0.87
APLF-202ENST00000394342 CTSHP09668 335 aa9.62□□□□□ -0.87
APLF-202ENST00000394342 U2AF2P26368 475 aaKnown RBP eCLIP9.62□□□□□ -0.87
APLF-202ENST00000394342 KLRC1P26715 233 aa9.62□□□□□ -0.87
APLF-202ENST00000394342 GJB2P29033 226 aa9.62□□□□□ -0.87
APLF-202ENST00000394342 TRAPPC10P48553 1259 aa9.62□□□□□ -0.87
APLF-202ENST00000394342 MRPS6P82932 125 aaKnown RBP9.62□□□□□ -0.87
APLF-202ENST00000394342 PRKCEQ02156 737 aa9.62□□□□□ -0.87
APLF-202ENST00000394342 MGAT3Q09327 533 aa9.62□□□□□ -0.87
APLF-202ENST00000394342 GNL2Q13823 731 aaKnown RBP9.62□□□□□ -0.87
APLF-202ENST00000394342 RAB30Q15771 203 aa9.62□□□□□ -0.87
APLF-202ENST00000394342 CALCRLQ16602 461 aa9.62□□□□□ -0.87
APLF-202ENST00000394342 UGCGQ16739 394 aa9.62□□□□□ -0.87
APLF-202ENST00000394342 PLEKHG4Q58EX7 1191 aa9.62□□□□□ -0.87
APLF-202ENST00000394342 NOSTRINQ8IVI9 506 aa9.62□□□□□ -0.87
APLF-202ENST00000394342 PHOSPHO2Q8TCD6 241 aa9.62□□□□□ -0.87
APLF-202ENST00000394342 DNAJB3Q8WWF6 145 aa9.62□□□□□ -0.87
APLF-202ENST00000394342 SLC9A7Q96T83 725 aa9.62□□□□□ -0.87
APLF-202ENST00000394342 SMC3Q9UQE7 1217 aa9.62□□□□□ -0.87
APLF-202ENST00000394342 KDM3AQ9Y4C1 1321 aa9.61□□□□□ -0.87
APLF-202ENST00000394342 M0QZ92 97 aa9.61□□□□□ -0.87
APLF-202ENST00000394342 EML1O00423 815 aa9.61□□□□□ -0.87
APLF-202ENST00000394342 MAGEB2O15479 319 aa9.61□□□□□ -0.87
APLF-202ENST00000394342 C22orf31O95567 290 aa9.61□□□□□ -0.87
APLF-202ENST00000394342 ATP2A2P16615 1042 aaKnown RBP9.61□□□□□ -0.87
APLF-202ENST00000394342 QARSP47897 775 aaKnown RBP9.61□□□□□ -0.87
APLF-202ENST00000394342 KCNJ6P48051 423 aa9.61□□□□□ -0.87
APLF-202ENST00000394342 PSMC5P62195 406 aa9.61□□□□□ -0.87
APLF-202ENST00000394342 SPIRE1Q08AE8 756 aa9.61□□□□□ -0.87
APLF-202ENST00000394342 CUL4AQ13619 759 aa9.61□□□□□ -0.87
APLF-202ENST00000394342 IKBKEQ14164 716 aa9.61□□□□□ -0.87
APLF-202ENST00000394342 EPHA7Q15375 998 aa9.61□□□□□ -0.87
APLF-202ENST00000394342 XKR3Q5GH77 459 aa9.61□□□□□ -0.87
APLF-202ENST00000394342 ZNF697Q5TEC3 545 aa9.61□□□□□ -0.87
APLF-202ENST00000394342 IER5Q5VY09 327 aa9.61□□□□□ -0.87
APLF-202ENST00000394342 SEPT8Q92599 483 aa9.61□□□□□ -0.87
APLF-202ENST00000394342 APBB2Q92870 758 aa9.61□□□□□ -0.87
APLF-202ENST00000394342 MTMR9Q96QG7 549 aa9.61□□□□□ -0.87
APLF-202ENST00000394342 PHF12Q96QT6 1004 aa9.61□□□□□ -0.87
APLF-202ENST00000394342 NIFKQ9BYG3 293 aaKnown RBP9.61□□□□□ -0.87
APLF-202ENST00000394342 FAM49AQ9H0Q0 323 aaPredicted RBP9.61□□□□□ -0.87
APLF-202ENST00000394342 MSRAQ9UJ68 235 aa9.61□□□□□ -0.87
APLF-202ENST00000394342 NOL7Q9UMY1 257 aaKnown RBP9.61□□□□□ -0.87
APLF-202ENST00000394342 TRPV2Q9Y5S1 764 aa9.61□□□□□ -0.87
APLF-202ENST00000394342 CDY2AQ9Y6F7 541 aa9.61□□□□□ -0.87
APLF-202ENST00000394342 SQORQ9Y6N5 450 aa9.61□□□□□ -0.87
APLF-202ENST00000394342 CITO14578 2027 aa9.61□□□□□ -0.87
APLF-202ENST00000394342 GRXCR1A8MXD5 290 aa9.6□□□□□ -0.87
APLF-202ENST00000394342 KIF28PB7ZC32 967 aa9.6□□□□□ -0.87
APLF-202ENST00000394342 H3BQV1 296 aa9.6□□□□□ -0.87
APLF-202ENST00000394342 WNT7AO00755 349 aa9.6□□□□□ -0.87
APLF-202ENST00000394342 STBD1O95210 358 aa9.6□□□□□ -0.87
APLF-202ENST00000394342 P4HBP07237 508 aaKnown RBP9.6□□□□□ -0.87
APLF-202ENST00000394342 DNAJB2P25686 324 aa9.6□□□□□ -0.87
APLF-202ENST00000394342 MCM7P33993 719 aa9.6□□□□□ -0.87
APLF-202ENST00000394342 WDR5P61964 334 aaKnown RBP9.6□□□□□ -0.87
APLF-202ENST00000394342 LPIN1Q14693 890 aa9.6□□□□□ -0.87
APLF-202ENST00000394342 TARBP2Q15633 366 aaKnown RBP9.6□□□□□ -0.87
APLF-202ENST00000394342 TCTN1Q2MV58 587 aa9.6□□□□□ -0.87
APLF-202ENST00000394342 TTC38Q5R3I4 469 aa9.6□□□□□ -0.87
APLF-202ENST00000394342 NCAPH2Q6IBW4 605 aa9.6□□□□□ -0.87
APLF-202ENST00000394342 TSHZ1Q6ZSZ6 1077 aa9.6□□□□□ -0.87
APLF-202ENST00000394342 FAM43BQ6ZT52 329 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms