RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 ATP6V0A4Q9HBG4 840 aa20.83■□□□□ 0.93
CCDC50-202ENST00000392456 PCNTO95613 3336 aa20.83■□□□□ 0.92
CCDC50-202ENST00000392456 POTEB3A0JP26 581 aa20.83■□□□□ 0.92
CCDC50-202ENST00000392456 NRDCO43847 1150 aa20.83■□□□□ 0.92
CCDC50-202ENST00000392456 POTEBQ6S5H4 581 aa20.83■□□□□ 0.92
CCDC50-202ENST00000392456 KIAA1328Q86T90 577 aa20.83■□□□□ 0.92
CCDC50-202ENST00000392456 MSANTD4Q8NCY6 345 aa20.83■□□□□ 0.92
CCDC50-202ENST00000392456 SLC10A4Q96EP9 437 aa20.83■□□□□ 0.92
CCDC50-202ENST00000392456 FAM20AQ96MK3 541 aa20.83■□□□□ 0.92
CCDC50-202ENST00000392456 BPIFA3Q9BQP9 254 aa20.83■□□□□ 0.92
CCDC50-202ENST00000392456 PKD2L1Q9P0L9 805 aa20.83■□□□□ 0.92
CCDC50-202ENST00000392456 POTEB2H3BUK9 544 aa20.82■□□□□ 0.92
CCDC50-202ENST00000392456 KLRC4O43908 158 aa20.82■□□□□ 0.92
CCDC50-202ENST00000392456 COBLO75128 1261 aa20.82■□□□□ 0.92
CCDC50-202ENST00000392456 RPN1P04843 607 aaKnown RBP20.82■□□□□ 0.92
CCDC50-202ENST00000392456 CCT6AP40227 531 aaKnown RBP20.82■□□□□ 0.92
CCDC50-202ENST00000392456 CD151P48509 253 aa20.82■□□□□ 0.92
CCDC50-202ENST00000392456 TMEM119Q4V9L6 283 aa20.82■□□□□ 0.92
CCDC50-202ENST00000392456 TRMT44Q8IYL2 757 aaKnown RBP20.82■□□□□ 0.92
CCDC50-202ENST00000392456 OR8K1Q8NGG5 319 aa20.82■□□□□ 0.92
CCDC50-202ENST00000392456 IMPDH2P12268 514 aa20.82■□□□□ 0.92
CCDC50-202ENST00000392456 MXRA8Q9BRK3 442 aa20.82■□□□□ 0.92
CCDC50-202ENST00000392456 TRIM9Q9C026 710 aa20.82■□□□□ 0.92
CCDC50-202ENST00000392456 KIAA1024Q9UPX6 916 aa20.82■□□□□ 0.92
CCDC50-202ENST00000392456 E9PMD0 336 aa20.81■□□□□ 0.92
CCDC50-202ENST00000392456 SOCS7O14512 581 aa20.81■□□□□ 0.92
CCDC50-202ENST00000392456 PGM5Q15124 567 aa20.81■□□□□ 0.92
CCDC50-202ENST00000392456 GPAT2Q6NUI2 795 aa20.81■□□□□ 0.92
CCDC50-202ENST00000392456 CATSPER3Q86XQ3 398 aa20.81■□□□□ 0.92
CCDC50-202ENST00000392456 TCP11Q8WWU5 503 aa20.81■□□□□ 0.92
CCDC50-202ENST00000392456 CDK5RAP3Q96JB5 506 aa20.81■□□□□ 0.92
CCDC50-202ENST00000392456 TXNRD2Q9NNW7 524 aa20.81■□□□□ 0.92
CCDC50-202ENST00000392456 MYPNQ86TC9 1320 aa20.81■□□□□ 0.92
CCDC50-202ENST00000392456 PSMD10O75832 226 aa20.81■□□□□ 0.92
CCDC50-202ENST00000392456 RASSF9O75901 435 aa20.81■□□□□ 0.92
CCDC50-202ENST00000392456 SPATA31C1P0DKV0 1188 aa20.81■□□□□ 0.92
CCDC50-202ENST00000392456 MYCLP12524 364 aaPredicted RBP20.81■□□□□ 0.92
CCDC50-202ENST00000392456 IBSPP21815 317 aaPredicted RBP20.81■□□□□ 0.92
CCDC50-202ENST00000392456 KCNB1Q14721 858 aa20.81■□□□□ 0.92
CCDC50-202ENST00000392456 OTOP1Q7RTM1 612 aa20.81■□□□□ 0.92
CCDC50-202ENST00000392456 TRIML1Q8N9V2 468 aa20.81■□□□□ 0.92
CCDC50-202ENST00000392456 LMBR1Q8WVP7 490 aa20.81■□□□□ 0.92
CCDC50-202ENST00000392456 PNKPQ96T60 521 aa20.81■□□□□ 0.92
CCDC50-202ENST00000392456 PDCD2LQ9BRP1 358 aa20.81■□□□□ 0.92
CCDC50-202ENST00000392456 PAGR1Q9BTK6 254 aa20.81■□□□□ 0.92
CCDC50-202ENST00000392456 EHMT1Q9H9B1 1298 aa20.81■□□□□ 0.92
CCDC50-202ENST00000392456 PXMP2Q9NR77 195 aa20.81■□□□□ 0.92
CCDC50-202ENST00000392456 CYP39A1Q9NYL5 469 aa20.81■□□□□ 0.92
CCDC50-202ENST00000392456 AGTPBP1Q9UPW5 1226 aa20.81■□□□□ 0.92
CCDC50-202ENST00000392456 GDAQ9Y2T3 454 aa20.81■□□□□ 0.92
CCDC50-202ENST00000392456 POTEFA5A3E0 1075 aa20.8■□□□□ 0.92
CCDC50-202ENST00000392456 MYMKA6NI61 221 aa20.8■□□□□ 0.92
CCDC50-202ENST00000392456 ENO4A6NNW6 628 aa20.8■□□□□ 0.92
CCDC50-202ENST00000392456 CHMP2AO43633 222 aa20.8■□□□□ 0.92
CCDC50-202ENST00000392456 RTN3O95197 1032 aaPredicted RBP20.8■□□□□ 0.92
CCDC50-202ENST00000392456 SYF2O95926 243 aaKnown RBP20.8■□□□□ 0.92
CCDC50-202ENST00000392456 AARSP49588 968 aaKnown RBP eCLIP20.8■□□□□ 0.92
CCDC50-202ENST00000392456 SMTNP53814 917 aa20.8■□□□□ 0.92
CCDC50-202ENST00000392456 PSMC6P62333 389 aa20.8■□□□□ 0.92
CCDC50-202ENST00000392456 KLHL10Q6JEL2 608 aa20.8■□□□□ 0.92
CCDC50-202ENST00000392456 POTEGQ6S5H5 508 aa20.8■□□□□ 0.92
CCDC50-202ENST00000392456 SLC5A5Q92911 643 aa20.8■□□□□ 0.92
CCDC50-202ENST00000392456 CCDC97Q96F63 343 aaPredicted RBP20.8■□□□□ 0.92
CCDC50-202ENST00000392456 KCNH7Q9NS40 1196 aa20.8■□□□□ 0.92
CCDC50-202ENST00000392456 RGL1Q9NZL6 768 aa20.8■□□□□ 0.92
CCDC50-202ENST00000392456 MAPK8IP1Q9UQF2 711 aa20.8■□□□□ 0.92
CCDC50-202ENST00000392456 PPP1R3GB7ZBB8 358 aa20.8■□□□□ 0.92
CCDC50-202ENST00000392456 CELF2O95319 508 aaKnown RBP20.8■□□□□ 0.92
CCDC50-202ENST00000392456 IRAK1P51617 712 aa20.8■□□□□ 0.92
CCDC50-202ENST00000392456 HERVK_113P62684 666 aa20.8■□□□□ 0.92
CCDC50-202ENST00000392456 CYP4A11Q02928 519 aa20.8■□□□□ 0.92
CCDC50-202ENST00000392456 HSP90AA4PQ58FG1 418 aa20.8■□□□□ 0.92
CCDC50-202ENST00000392456 HHATQ5VTY9 493 aa20.8■□□□□ 0.92
CCDC50-202ENST00000392456 MLKLQ8NB16 471 aa20.8■□□□□ 0.92
CCDC50-202ENST00000392456 MAGEC3Q8TD91 643 aa20.8■□□□□ 0.92
CCDC50-202ENST00000392456 LARP4BQ92615 738 aaKnown RBP20.8■□□□□ 0.92
CCDC50-202ENST00000392456 RAD54LQ92698 747 aa20.8■□□□□ 0.92
CCDC50-202ENST00000392456 BLOC1S6Q9UL45 172 aa20.8■□□□□ 0.92
CCDC50-202ENST00000392456 CNMDO75829 334 aa20.79■□□□□ 0.92
CCDC50-202ENST00000392456 ATP1A3P13637 1013 aa20.79■□□□□ 0.92
CCDC50-202ENST00000392456 Q3C1V9 767 aa20.79■□□□□ 0.92
CCDC50-202ENST00000392456 PCNX4Q63HM2 1172 aa20.79■□□□□ 0.92
CCDC50-202ENST00000392456 RINLQ6ZS11 566 aa20.79■□□□□ 0.92
CCDC50-202ENST00000392456 HPS3Q969F9 1004 aa20.79■□□□□ 0.92
CCDC50-202ENST00000392456 ZNF577Q9BSK1 485 aa20.79■□□□□ 0.92
CCDC50-202ENST00000392456 CUEDC2Q9H467 287 aa20.79■□□□□ 0.92
CCDC50-202ENST00000392456 ACAD9Q9H845 621 aa20.79■□□□□ 0.92
CCDC50-202ENST00000392456 BATF3Q9NR55 127 aa20.79■□□□□ 0.92
CCDC50-202ENST00000392456 MAP3K20Q9NYL2 800 aaKnown RBP20.79■□□□□ 0.92
CCDC50-202ENST00000392456 FRMPD4Q14CM0 1322 aa20.79■□□□□ 0.92
CCDC50-202ENST00000392456 EZRP15311 586 aaKnown RBP20.79■□□□□ 0.92
CCDC50-202ENST00000392456 TKFCQ3LXA3 575 aa20.79■□□□□ 0.92
CCDC50-202ENST00000392456 HYIQ5T013 277 aa20.79■□□□□ 0.92
CCDC50-202ENST00000392456 ARHGEF16Q5VV41 709 aa20.79■□□□□ 0.92
CCDC50-202ENST00000392456 DYMQ7RTS9 669 aa20.79■□□□□ 0.92
CCDC50-202ENST00000392456 RBM12BQ8IXT5 1001 aaKnown RBP20.79■□□□□ 0.92
CCDC50-202ENST00000392456 PNMA2Q9UL42 364 aa20.79■□□□□ 0.92
CCDC50-202ENST00000392456 UBIAD1Q9Y5Z9 338 aa20.79■□□□□ 0.92
CCDC50-202ENST00000392456 LOC285556D6RIA3 1793 aa20.79■□□□□ 0.92
CCDC50-202ENST00000392456 IPO5O00410 1097 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms