RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 HOXA7P31268 230 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 HOXC12P31275 282 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC5A2P31639 672 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 DNAJA1P31689 397 aaKnown RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 APOBEC3AP31941 199 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 HNRNPH3P31942 346 aaKnown RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 OTX2P32243 289 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 MC4RP32245 332 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 CHRNA3P32297 505 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 GRK4P32298 578 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 CTHP32929 405 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 DUTP33316 252 aaKnown RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 GUCY1A2P33402 732 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 MCM5P33992 734 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 HTR7P34969 479 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 CNR2P34972 360 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 IL13P35225 146 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 SFTPDP35247 375 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 IDUAP35475 653 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 SOX11P35716 441 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 BMPR1AP36894 532 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 LTBRP36941 435 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 SREBF1P36956 1147 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 ETFBP38117 255 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 RBMXP38159 391 aaKnown RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 GGCXP38435 758 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 LIPAP38571 399 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 DCTP40126 519 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 CTRLP40313 264 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 STAT3P40763 770 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 CCNFP41002 786 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 MC3RP41968 323 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 STAT5AP42229 794 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 GRIA2P42262 883 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 ECE1P42892 770 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 ZAP70P43403 619 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 KIR2DL1P43626 348 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 KIR2DL2P43627 348 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 KIR2DL3P43628 341 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 AFMP43652 599 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 NKX2-1P43699 371 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 ASPAP45381 313 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 GPR3P46089 330 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 PLA2G4AP47712 749 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 RAP1GAPP47736 663 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 EIF1AXP47813 144 aaKnown RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 MT4P47944 62 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC6A11P48066 632 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 GJA8P48165 433 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 SOX2P48431 317 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 SOX9P48436 509 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 GIPRP48546 466 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 KCNC1P48547 511 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 SERPINB4P48594 390 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 TNNI2P48788 182 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 POLD2P49005 469 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 MAPKAPK2P49137 400 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 MTNR1BP49286 362 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 SARSP49591 514 aaKnown RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 CXCR3P49682 368 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 VEGFCP49767 419 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 FLT3LGP49771 235 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 RGS3P49796 1198 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 TAF6P49848 677 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 GMPSP49915 693 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 LIG3P49916 1009 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 CPT1AP50416 773 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 ST13P50502 369 aaKnown RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 FXR1P51114 621 aaKnown RBP eCLIP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF84P51523 738 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 IRAK1P51617 712 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 GPC3P51654 580 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF157P51786 506 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 KCNQ1P51787 676 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 CLCN7P51798 805 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 AFF3P51826 1226 aaKnown RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 LUMP51884 338 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 FUT6P51993 359 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 HK2P52789 917 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 HMGA2P52926 109 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 CRIP2P52943 208 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 ARFIP2P53365 341 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 PMS1P54277 932 aaKnown RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 PMS2P54278 862 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 EPHB1P54762 984 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 MLLT10P55197 1068 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 CASP7P55210 303 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 FOXA1P55317 472 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 SEC13P55735 322 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 GFRA1P56159 465 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 DLX5P56178 289 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 RIPPLY3P57055 190 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 JAM2P57087 298 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 TMPRSS3P57727 454 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 CORO7P57737 925 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 FOXL2P58012 376 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 C21orf58P58505 322 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 LINC01547P58512 204 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 DSCR10P59022 87 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 RTP1P59025 263 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms