RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 CCDC68Q9H2F9 335 aa11.12□□□□□ -0.63
PKP4-201ENST00000389757 POLLQ9UGP5 575 aa11.12□□□□□ -0.63
PKP4-201ENST00000389757 SCAF8Q9UPN6 1271 aaKnown RBP11.12□□□□□ -0.63
PKP4-201ENST00000389757 HUS1O60921 280 aa11.11□□□□□ -0.63
PKP4-201ENST00000389757 EXOSC10Q01780 885 aaKnown RBP11.11□□□□□ -0.63
PKP4-201ENST00000389757 GPRC5AQ8NFJ5 357 aa11.11□□□□□ -0.63
PKP4-201ENST00000389757 MRPL4Q9BYD3 311 aaKnown RBP11.11□□□□□ -0.63
PKP4-201ENST00000389757 ADARB2Q9NS39 739 aaKnown RBP11.11□□□□□ -0.63
PKP4-201ENST00000389757 EIF3CLB5ME19 914 aaKnown RBP11.11□□□□□ -0.63
PKP4-201ENST00000389757 ATF2P15336 505 aa11.11□□□□□ -0.63
PKP4-201ENST00000389757 LMNB2Q03252 620 aa11.11□□□□□ -0.63
PKP4-201ENST00000389757 COASYQ13057 564 aa11.11□□□□□ -0.63
PKP4-201ENST00000389757 VPS52Q8N1B4 723 aa11.11□□□□□ -0.63
PKP4-201ENST00000389757 EIF3CQ99613 913 aaKnown RBP11.11□□□□□ -0.63
PKP4-201ENST00000389757 EBAG9O00559 213 aa11.11□□□□□ -0.63
PKP4-201ENST00000389757 GGPS1O95749 300 aa11.11□□□□□ -0.63
PKP4-201ENST00000389757 CDC25BP30305 580 aa11.11□□□□□ -0.63
PKP4-201ENST00000389757 PPP4CP60510 307 aa11.11□□□□□ -0.63
PKP4-201ENST00000389757 C4orf50Q6ZRC1 276 aa11.11□□□□□ -0.63
PKP4-201ENST00000389757 SCYL3Q8IZE3 742 aa11.11□□□□□ -0.63
PKP4-201ENST00000389757 PROM2Q8N271 834 aa11.11□□□□□ -0.63
PKP4-201ENST00000389757 RYBPQ8N488 228 aaPredicted RBP11.11□□□□□ -0.63
PKP4-201ENST00000389757 FAM213AQ9BRX8 229 aa11.11□□□□□ -0.63
PKP4-201ENST00000389757 KIF9Q9HAQ2 790 aa11.11□□□□□ -0.63
PKP4-201ENST00000389757 TYW1Q9NV66 732 aaKnown RBP11.11□□□□□ -0.63
PKP4-201ENST00000389757 ANAPC4Q9UJX5 808 aa11.11□□□□□ -0.63
PKP4-201ENST00000389757 CYP2B6P20813 491 aa11.11□□□□□ -0.63
PKP4-201ENST00000389757 KLRK1P26718 216 aa11.11□□□□□ -0.63
PKP4-201ENST00000389757 MMP14P50281 582 aa11.11□□□□□ -0.63
PKP4-201ENST00000389757 GPC3P51654 580 aa11.11□□□□□ -0.63
PKP4-201ENST00000389757 SLITRK6Q9H5Y7 841 aa11.11□□□□□ -0.63
PKP4-201ENST00000389757 IPO11Q9UI26 975 aaKnown RBP11.11□□□□□ -0.63
PKP4-201ENST00000389757 PLCB4Q15147 1175 aa11.11□□□□□ -0.63
PKP4-201ENST00000389757 ERCC6LQ2NKX8 1250 aa11.11□□□□□ -0.63
PKP4-201ENST00000389757 TCP11X2Q5H9J9 407 aa11.11□□□□□ -0.63
PKP4-201ENST00000389757 TSC1Q92574 1164 aa11.11□□□□□ -0.63
PKP4-201ENST00000389757 KBTBD13C9JR72 458 aa11.1□□□□□ -0.63
PKP4-201ENST00000389757 ETF1P62495 437 aaKnown RBP11.1□□□□□ -0.63
PKP4-201ENST00000389757 TSPY1Q01534 308 aa11.1□□□□□ -0.63
PKP4-201ENST00000389757 ELF2Q15723 593 aa11.1□□□□□ -0.63
PKP4-201ENST00000389757 KRT71Q3SY84 523 aa11.1□□□□□ -0.63
PKP4-201ENST00000389757 RUNDC3BQ96NL0 473 aa11.1□□□□□ -0.63
PKP4-201ENST00000389757 POLIQ9UNA4 740 aa11.1□□□□□ -0.63
PKP4-201ENST00000389757 PFASO15067 1338 aa11.1□□□□□ -0.63
PKP4-201ENST00000389757 PASKQ96RG2 1323 aa11.1□□□□□ -0.63
PKP4-201ENST00000389757 TNS2Q63HR2 1409 aa11.1□□□□□ -0.63
PKP4-201ENST00000389757 I3L4J1 428 aa11.1□□□□□ -0.63
PKP4-201ENST00000389757 DYNC1LI2O43237 492 aaPredicted RBP11.1□□□□□ -0.63
PKP4-201ENST00000389757 SERPING1P05155 500 aa11.1□□□□□ -0.63
PKP4-201ENST00000389757 NR3C2P08235 984 aa11.1□□□□□ -0.63
PKP4-201ENST00000389757 C6orf222P0C671 652 aaPredicted RBP11.1□□□□□ -0.63
PKP4-201ENST00000389757 SRGAP2BP0DMP2 458 aa11.1□□□□□ -0.63
PKP4-201ENST00000389757 ZNF699Q32M78 642 aa11.1□□□□□ -0.63
PKP4-201ENST00000389757 PRPSAP2O60256 369 aa11.1□□□□□ -0.63
PKP4-201ENST00000389757 TAB3Q8N5C8 712 aaPredicted RBP11.1□□□□□ -0.63
PKP4-201ENST00000389757 CCNYQ8ND76 341 aa11.1□□□□□ -0.63
PKP4-201ENST00000389757 KATNAL1Q9BW62 490 aa11.1□□□□□ -0.63
PKP4-201ENST00000389757 EPB41L4AQ9HCS5 686 aaPredicted RBP11.1□□□□□ -0.63
PKP4-201ENST00000389757 COL5A2P05997 1499 aaPredicted RBP11.1□□□□□ -0.63
PKP4-201ENST00000389757 GH1P01241 217 aa11.1□□□□□ -0.63
PKP4-201ENST00000389757 KRT1P04264 644 aa11.1□□□□□ -0.63
PKP4-201ENST00000389757 PDHBP11177 359 aa11.1□□□□□ -0.63
PKP4-201ENST00000389757 U2AF2P26368 475 aaKnown RBP eCLIP11.1□□□□□ -0.633e-7■■■■□ 21.5
PKP4-201ENST00000389757 C10orf76Q5T2E6 689 aa11.1□□□□□ -0.63
PKP4-201ENST00000389757 CHST13Q8NET6 341 aa11.1□□□□□ -0.63
PKP4-201ENST00000389757 IGDCC4Q8TDY8 1250 aa11.1□□□□□ -0.63
PKP4-201ENST00000389757 ZNF668Q96K58 619 aaPredicted RBP11.1□□□□□ -0.63
PKP4-201ENST00000389757 TUFT1Q9NNX1 390 aa11.1□□□□□ -0.63
PKP4-201ENST00000389757 GOLGA8CPA6NN73 597 aa11.09□□□□□ -0.63
PKP4-201ENST00000389757 CIITAP33076 1130 aa11.09□□□□□ -0.63
PKP4-201ENST00000389757 ARL13BQ3SXY8 428 aa11.09□□□□□ -0.63
PKP4-201ENST00000389757 NAA35Q5VZE5 725 aa11.09□□□□□ -0.63
PKP4-201ENST00000389757 CYFIP1Q7L576 1253 aa11.09□□□□□ -0.63
PKP4-201ENST00000389757 ERICH1Q86X53 443 aa11.09□□□□□ -0.63
PKP4-201ENST00000389757 AFAP1L1Q8TED9 768 aa11.09□□□□□ -0.63
PKP4-201ENST00000389757 DPH5Q9H2P9 285 aa11.09□□□□□ -0.63
PKP4-201ENST00000389757 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.09□□□□□ -0.632e-6■■■■■ 30.8
PKP4-201ENST00000389757 KRT10P13645 584 aa11.09□□□□□ -0.63
PKP4-201ENST00000389757 EPHX2P34913 555 aa11.09□□□□□ -0.63
PKP4-201ENST00000389757 KNOP1Q1ED39 458 aaKnown RBP11.09□□□□□ -0.63
PKP4-201ENST00000389757 POLD4Q9HCU8 107 aa11.09□□□□□ -0.63
PKP4-201ENST00000389757 PRDM5Q9NQX1 630 aaPredicted RBP11.09□□□□□ -0.63
PKP4-201ENST00000389757 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.09□□□□□ -0.632e-7■■■□□ 15.4
PKP4-201ENST00000389757 SLIT1O75093 1534 aa11.09□□□□□ -0.63
PKP4-201ENST00000389757 GTF2A2P52657 109 aa11.09□□□□□ -0.63
PKP4-201ENST00000389757 EFNA5P52803 228 aa11.09□□□□□ -0.63
PKP4-201ENST00000389757 ATP2C1P98194 919 aaPredicted RBP11.09□□□□□ -0.63
PKP4-201ENST00000389757 PDS5AQ29RF7 1337 aaKnown RBP11.09□□□□□ -0.63
PKP4-201ENST00000389757 EIF4A3P38919 411 aaKnown RBP11.09□□□□□ -0.63
PKP4-201ENST00000389757 PPFIA1Q13136 1202 aa11.09□□□□□ -0.63
PKP4-201ENST00000389757 KRT31Q15323 416 aa11.09□□□□□ -0.63
PKP4-201ENST00000389757 XKR3Q5GH77 459 aa11.09□□□□□ -0.63
PKP4-201ENST00000389757 ELMOD1Q8N336 334 aa11.09□□□□□ -0.63
PKP4-201ENST00000389757 SEPT1Q8WYJ6 367 aa11.09□□□□□ -0.63
PKP4-201ENST00000389757 PRMT6Q96LA8 375 aaPredicted RBP11.09□□□□□ -0.63
PKP4-201ENST00000389757 SMARCAD1Q9H4L7 1026 aa11.09□□□□□ -0.63
PKP4-201ENST00000389757 SLC8A2Q9UPR5 921 aa11.09□□□□□ -0.63
PKP4-201ENST00000389757 MAD1L1Q9Y6D9 718 aa11.09□□□□□ -0.63
PKP4-201ENST00000389757 SGK1O00141 431 aa11.09□□□□□ -0.63
PKP4-201ENST00000389757 GBP1P32455 592 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms