RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 TUBE1Q9UJT0 475 aa18.13■□□□□ 0.49
SNRPB-201ENST00000381342 ZDHHC9Q9Y397 364 aa18.13■□□□□ 0.49
SNRPB-201ENST00000381342 SLC4A7Q9Y6M7 1214 aa18.13■□□□□ 0.49
SNRPB-201ENST00000381342 COL1A2P08123 1366 aa18.13■□□□□ 0.49
SNRPB-201ENST00000381342 RANBP2P49792 3224 aaKnown RBP18.13■□□□□ 0.49
SNRPB-201ENST00000381342 ZBTB42B2RXF5 422 aa18.12■□□□□ 0.49
SNRPB-201ENST00000381342 STBD1O95210 358 aa18.12■□□□□ 0.49
SNRPB-201ENST00000381342 BRD1O95696 1058 aa18.12■□□□□ 0.49
SNRPB-201ENST00000381342 BMP15O95972 392 aa18.12■□□□□ 0.49
SNRPB-201ENST00000381342 PTK7Q13308 1070 aa18.12■□□□□ 0.49
SNRPB-201ENST00000381342 PLA2G4FQ68DD2 849 aa18.12■□□□□ 0.49
SNRPB-201ENST00000381342 DTHD1Q6ZMT9 781 aa18.12■□□□□ 0.49
SNRPB-201ENST00000381342 NEK9Q8TD19 979 aa18.12■□□□□ 0.49
SNRPB-201ENST00000381342 USP28Q96RU2 1077 aa18.12■□□□□ 0.49
SNRPB-201ENST00000381342 SEMA6BQ9H3T3 888 aa18.12■□□□□ 0.49
SNRPB-201ENST00000381342 CEP131Q9UPN4 1083 aa18.12■□□□□ 0.49
SNRPB-201ENST00000381342 STXBP5LQ9Y2K9 1186 aa18.12■□□□□ 0.49
SNRPB-201ENST00000381342 MBLAC1A4D2B0 266 aaPredicted RBP18.11■□□□□ 0.49
SNRPB-201ENST00000381342 VWA3AA6NCI4 1184 aa18.11■□□□□ 0.49
SNRPB-201ENST00000381342 RRN3P2A6NIE6 340 aa18.11■□□□□ 0.49
SNRPB-201ENST00000381342 PP2D1A8MPX8 630 aa18.11■□□□□ 0.49
SNRPB-201ENST00000381342 DNAJB2P25686 324 aa18.11■□□□□ 0.49
SNRPB-201ENST00000381342 PTPAQ15257 358 aa18.11■□□□□ 0.49
SNRPB-201ENST00000381342 RAB30Q15771 203 aa18.11■□□□□ 0.49
SNRPB-201ENST00000381342 TRIM71Q2Q1W2 868 aaKnown RBP18.11■□□□□ 0.49
SNRPB-201ENST00000381342 XKR3Q5GH77 459 aa18.11■□□□□ 0.49
SNRPB-201ENST00000381342 TPH2Q8IWU9 490 aa18.11■□□□□ 0.49
SNRPB-201ENST00000381342 IGSF22Q8N9C0 903 aa18.11■□□□□ 0.49
SNRPB-201ENST00000381342 TNPO1Q92973 898 aaKnown RBP18.11■□□□□ 0.49
SNRPB-201ENST00000381342 TIFAQ96CG3 184 aa18.11■□□□□ 0.49
SNRPB-201ENST00000381342 SH2D3AQ9BRG2 576 aa18.11■□□□□ 0.49
SNRPB-201ENST00000381342 DAXXQ9UER7 740 aaPredicted RBP18.11■□□□□ 0.49
SNRPB-201ENST00000381342 LRWD1Q9UFC0 647 aa18.11■□□□□ 0.49
SNRPB-201ENST00000381342 LOXHD1Q8IVV2 1947 aa18.11■□□□□ 0.49
SNRPB-201ENST00000381342 MED24O75448 989 aa18.1■□□□□ 0.49
SNRPB-201ENST00000381342 SLITRK3O94933 977 aa18.1■□□□□ 0.49
SNRPB-201ENST00000381342 C22orf31O95567 290 aa18.1■□□□□ 0.49
SNRPB-201ENST00000381342 SELPP16109 830 aa18.1■□□□□ 0.49
SNRPB-201ENST00000381342 MTERF2Q49AM1 385 aa18.1■□□□□ 0.49
SNRPB-201ENST00000381342 ZNF484Q5JVG2 852 aa18.1■□□□□ 0.49
SNRPB-201ENST00000381342 RASIP1Q5U651 963 aa18.1■□□□□ 0.49
SNRPB-201ENST00000381342 ARL6IP4Q66PJ3 421 aaKnown RBP18.1■□□□□ 0.49
SNRPB-201ENST00000381342 ANO5Q75V66 913 aa18.1■□□□□ 0.49
SNRPB-201ENST00000381342 ERMNQ8TAM6 284 aa18.1■□□□□ 0.49
SNRPB-201ENST00000381342 HSD17B14Q9BPX1 270 aa18.1■□□□□ 0.49
SNRPB-201ENST00000381342 RAB34Q9BZG1 259 aa18.1■□□□□ 0.49
SNRPB-201ENST00000381342 ZSWIM4Q9H7M6 989 aa18.1■□□□□ 0.49
SNRPB-201ENST00000381342 NRBP2Q9NSY0 501 aa18.1■□□□□ 0.49
SNRPB-201ENST00000381342 DDX11L8A8MPP1 907 aa18.09■□□□□ 0.49
SNRPB-201ENST00000381342 RBAK-RBAKDNI3L0D1 243 aa18.09■□□□□ 0.49
SNRPB-201ENST00000381342 DKC1O60832 514 aaKnown RBP eCLIP18.09■□□□□ 0.491e-323■■■■□ 21.5
SNRPB-201ENST00000381342 SPATA31C1P0DKV0 1188 aa18.09■□□□□ 0.49
SNRPB-201ENST00000381342 KLRC1P26715 233 aa18.09■□□□□ 0.49
SNRPB-201ENST00000381342 DDIT3P35638 169 aa18.09■□□□□ 0.49
SNRPB-201ENST00000381342 GRIN1Q05586 938 aa18.09■□□□□ 0.49
SNRPB-201ENST00000381342 HAUS3Q68CZ6 603 aa18.09■□□□□ 0.49
SNRPB-201ENST00000381342 POTEGQ6S5H5 508 aa18.09■□□□□ 0.49
SNRPB-201ENST00000381342 MTHFD1LQ6UB35 978 aa18.09■□□□□ 0.49
SNRPB-201ENST00000381342 LRRC8DQ7L1W4 858 aa18.09■□□□□ 0.49
SNRPB-201ENST00000381342 C4orf19Q8IY42 314 aa18.09■□□□□ 0.49
SNRPB-201ENST00000381342 SNX29Q8TEQ0 813 aa18.09■□□□□ 0.49
SNRPB-201ENST00000381342 ZNF396Q96N95 335 aaPredicted RBP18.09■□□□□ 0.49
SNRPB-201ENST00000381342 FAM49AQ9H0Q0 323 aaPredicted RBP18.09■□□□□ 0.49
SNRPB-201ENST00000381342 TFIP11Q9UBB9 837 aaKnown RBP18.09■□□□□ 0.49
SNRPB-201ENST00000381342 TCHHQ07283 1943 aa18.08■□□□□ 0.49
SNRPB-201ENST00000381342 GRXCR1A8MXD5 290 aa18.08■□□□□ 0.48
SNRPB-201ENST00000381342 ZBTB39O15060 712 aa18.08■□□□□ 0.48
SNRPB-201ENST00000381342 CTSHP09668 335 aa18.08■□□□□ 0.48
SNRPB-201ENST00000381342 CKBP12277 381 aa18.08■□□□□ 0.48
SNRPB-201ENST00000381342 MARCKSP29966 332 aaPredicted RBP18.08■□□□□ 0.48
SNRPB-201ENST00000381342 CDC25AP30304 524 aa18.08■□□□□ 0.48
SNRPB-201ENST00000381342 YWHABP31946 246 aaKnown RBP18.08■□□□□ 0.48
SNRPB-201ENST00000381342 THPOP40225 353 aa18.08■□□□□ 0.48
SNRPB-201ENST00000381342 CCT6AP40227 531 aaKnown RBP18.08■□□□□ 0.48
SNRPB-201ENST00000381342 KCNJ6P48051 423 aa18.08■□□□□ 0.48
SNRPB-201ENST00000381342 NASPP49321 788 aaPredicted RBP18.08■□□□□ 0.48
SNRPB-201ENST00000381342 RBL2Q08999 1139 aa18.08■□□□□ 0.48
SNRPB-201ENST00000381342 PDIA5Q14554 519 aa18.08■□□□□ 0.48
SNRPB-201ENST00000381342 TARBP2Q15633 366 aaKnown RBP18.08■□□□□ 0.48
SNRPB-201ENST00000381342 CATSPER3Q86XQ3 398 aa18.08■□□□□ 0.48
SNRPB-201ENST00000381342 POLR3CQ9BUI4 534 aaPredicted RBP18.08■□□□□ 0.48
SNRPB-201ENST00000381342 NIFKQ9BYG3 293 aaKnown RBP18.08■□□□□ 0.48
SNRPB-201ENST00000381342 TUFT1Q9NNX1 390 aa18.08■□□□□ 0.48
SNRPB-201ENST00000381342 CXXC1Q9P0U4 656 aaPredicted RBP18.08■□□□□ 0.48
SNRPB-201ENST00000381342 A0A087WWV3 80 aa18.07■□□□□ 0.48
SNRPB-201ENST00000381342 ATP2A2P16615 1042 aaKnown RBP18.07■□□□□ 0.48
SNRPB-201ENST00000381342 RPA1P27694 616 aa18.07■□□□□ 0.48
SNRPB-201ENST00000381342 NPEPPSP55786 919 aa18.07■□□□□ 0.48
SNRPB-201ENST00000381342 ZNF618Q5T7W0 954 aa18.07■□□□□ 0.48
SNRPB-201ENST00000381342 TAF2Q6P1X5 1199 aa18.07■□□□□ 0.48
SNRPB-201ENST00000381342 ZNF579Q8NAF0 562 aaKnown RBP18.07■□□□□ 0.48
SNRPB-201ENST00000381342 DNAJB3Q8WWF6 145 aa18.07■□□□□ 0.48
SNRPB-201ENST00000381342 CHAMP1Q96JM3 812 aa18.07■□□□□ 0.48
SNRPB-201ENST00000381342 CEP89Q96ST8 783 aa18.07■□□□□ 0.48
SNRPB-201ENST00000381342 MMTAG2Q9BU76 263 aaKnown RBP18.07■□□□□ 0.48
SNRPB-201ENST00000381342 PBX4Q9BYU1 374 aa18.07■□□□□ 0.48
SNRPB-201ENST00000381342 ZNF576Q9H609 170 aa18.07■□□□□ 0.48
SNRPB-201ENST00000381342 SLC28A3Q9HAS3 691 aa18.07■□□□□ 0.48
SNRPB-201ENST00000381342 FBXO2Q9UK22 296 aaPredicted RBP18.07■□□□□ 0.48
SNRPB-201ENST00000381342 PCDHA2Q9Y5H9 948 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms