RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 TRPC6Q9Y210 931 aa23.76■■□□□ 1.39
CBWD3-202ENST00000377342 KINO60870 393 aaKnown RBP23.75■■□□□ 1.39
CBWD3-202ENST00000377342 XRCC6P12956 609 aaKnown RBP eCLIP23.75■■□□□ 1.39
CBWD3-202ENST00000377342 TARBP2Q15633 366 aaKnown RBP23.75■■□□□ 1.39
CBWD3-202ENST00000377342 SH3RF1Q7Z6J0 888 aa23.75■■□□□ 1.39
CBWD3-202ENST00000377342 SYT2Q8N9I0 419 aaPredicted RBP23.75■■□□□ 1.39
CBWD3-202ENST00000377342 ARRDC4Q8NCT1 418 aa23.75■■□□□ 1.39
CBWD3-202ENST00000377342 STAMQ92783 540 aa23.75■■□□□ 1.39
CBWD3-202ENST00000377342 TSEN34Q9BSV6 310 aaKnown RBP23.75■■□□□ 1.39
CBWD3-202ENST00000377342 MYH11P35749 1972 aa23.74■■□□□ 1.39
CBWD3-202ENST00000377342 DNM1LO00429 736 aa23.74■■□□□ 1.39
CBWD3-202ENST00000377342 SGPL1O95470 568 aa23.74■■□□□ 1.39
CBWD3-202ENST00000377342 MNX1P50219 401 aaPredicted RBP23.74■■□□□ 1.39
CBWD3-202ENST00000377342 KLHL40Q2TBA0 621 aa23.74■■□□□ 1.39
CBWD3-202ENST00000377342 CEP57L1Q8IYX8 460 aa23.74■■□□□ 1.39
CBWD3-202ENST00000377342 CNNM3Q8NE01 707 aa23.74■■□□□ 1.39
CBWD3-202ENST00000377342 MAGEF1Q9HAY2 307 aa23.74■■□□□ 1.39
CBWD3-202ENST00000377342 CYP26B1Q9NR63 512 aa23.74■■□□□ 1.39
CBWD3-202ENST00000377342 EVPLQ92817 2033 aa23.74■■□□□ 1.39
CBWD3-202ENST00000377342 MOXD2PA6NHM9 499 aa23.73■■□□□ 1.39
CBWD3-202ENST00000377342 HBP1O60381 514 aa23.73■■□□□ 1.39
CBWD3-202ENST00000377342 DHX8Q14562 1220 aaKnown RBP23.73■■□□□ 1.39
CBWD3-202ENST00000377342 MTERF2Q49AM1 385 aa23.73■■□□□ 1.39
CBWD3-202ENST00000377342 XKR9Q5GH70 373 aa23.73■■□□□ 1.39
CBWD3-202ENST00000377342 PAGE5Q96GU1 130 aa23.73■■□□□ 1.39
CBWD3-202ENST00000377342 RUSC1Q9BVN2 902 aa23.73■■□□□ 1.39
CBWD3-202ENST00000377342 KATNAL1Q9BW62 490 aa23.73■■□□□ 1.39
CBWD3-202ENST00000377342 TNMDQ9H2S6 317 aa23.73■■□□□ 1.39
CBWD3-202ENST00000377342 PHF24Q9UPV7 400 aa23.73■■□□□ 1.39
CBWD3-202ENST00000377342 SSBP05455 408 aaKnown RBP eCLIP23.73■■□□□ 1.39
CBWD3-202ENST00000377342 PRR29P0C7W0 189 aa23.73■■□□□ 1.39
CBWD3-202ENST00000377342 CYP11B2P19099 503 aa23.73■■□□□ 1.39
CBWD3-202ENST00000377342 GJA8P48165 433 aa23.73■■□□□ 1.39
CBWD3-202ENST00000377342 OTUD6AQ7L8S5 288 aa23.73■■□□□ 1.39
CBWD3-202ENST00000377342 TRAPPC12Q8WVT3 735 aa23.73■■□□□ 1.39
CBWD3-202ENST00000377342 CEP170P1Q96L14 293 aa23.73■■□□□ 1.39
CBWD3-202ENST00000377342 NRBP2Q9NSY0 501 aa23.73■■□□□ 1.39
CBWD3-202ENST00000377342 GRIN2DO15399 1336 aa23.72■■□□□ 1.39
CBWD3-202ENST00000377342 A0A1W2PQ45 241 aaPredicted RBP23.72■■□□□ 1.39
CBWD3-202ENST00000377342 A0A1W2PQY0 241 aa23.72■■□□□ 1.39
CBWD3-202ENST00000377342 ARHGEF35A5YM69 484 aa23.72■■□□□ 1.39
CBWD3-202ENST00000377342 SMIM10L2AP0DMW4 78 aa23.72■■□□□ 1.39
CBWD3-202ENST00000377342 SMIM10L2BP0DMW5 78 aa23.72■■□□□ 1.39
CBWD3-202ENST00000377342 INSRRP14616 1297 aa23.72■■□□□ 1.39
CBWD3-202ENST00000377342 CASP1P29466 404 aa23.72■■□□□ 1.39
CBWD3-202ENST00000377342 AFMP43652 599 aa23.72■■□□□ 1.39
CBWD3-202ENST00000377342 HIC1Q14526 733 aa23.72■■□□□ 1.39
CBWD3-202ENST00000377342 ARSHQ5FYA8 562 aa23.72■■□□□ 1.39
CBWD3-202ENST00000377342 SV2BQ7L1I2 683 aa23.72■■□□□ 1.39
CBWD3-202ENST00000377342 CLSTN2Q9H4D0 955 aa23.72■■□□□ 1.39
CBWD3-202ENST00000377342 COL1A2P08123 1366 aa23.72■■□□□ 1.39
CBWD3-202ENST00000377342 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.71■■□□□ 1.39
CBWD3-202ENST00000377342 MYMKA6NI61 221 aa23.71■■□□□ 1.39
CBWD3-202ENST00000377342 KBTBD13C9JR72 458 aa23.71■■□□□ 1.39
CBWD3-202ENST00000377342 HOXC8P31273 242 aa23.71■■□□□ 1.39
CBWD3-202ENST00000377342 CHMP4BP1P59074 171 aa23.71■■□□□ 1.39
CBWD3-202ENST00000377342 MDM2Q00987 491 aaPredicted RBP23.71■■□□□ 1.39
CBWD3-202ENST00000377342 PPFIA1Q13136 1202 aa23.71■■□□□ 1.39
CBWD3-202ENST00000377342 RINT1Q6NUQ1 792 aa23.71■■□□□ 1.39
CBWD3-202ENST00000377342 PADI6Q6TGC4 694 aa23.71■■□□□ 1.39
CBWD3-202ENST00000377342 GPBP1Q86WP2 473 aa23.71■■□□□ 1.39
CBWD3-202ENST00000377342 TRAK2O60296 914 aa23.7■■□□□ 1.39
CBWD3-202ENST00000377342 USO1O60763 962 aaKnown RBP23.7■■□□□ 1.39
CBWD3-202ENST00000377342 NBPF20Q3BBV1 942 aa23.7■■□□□ 1.39
CBWD3-202ENST00000377342 C1orf186Q6ZWK4 172 aa23.7■■□□□ 1.39
CBWD3-202ENST00000377342 LMBR1Q8WVP7 490 aa23.7■■□□□ 1.39
CBWD3-202ENST00000377342 ZBTB10Q96DT7 871 aa23.7■■□□□ 1.39
CBWD3-202ENST00000377342 CCDC43Q96MW1 224 aaKnown RBP23.7■■□□□ 1.39
CBWD3-202ENST00000377342 BMP2KQ9NSY1 1161 aaPredicted RBP23.7■■□□□ 1.39
CBWD3-202ENST00000377342 TMEM63CQ9P1W3 806 aa23.7■■□□□ 1.39
CBWD3-202ENST00000377342 CABYRO75952 493 aa23.7■■□□□ 1.38
CBWD3-202ENST00000377342 GRIK4Q16099 956 aa23.7■■□□□ 1.38
CBWD3-202ENST00000377342 MARCH8Q5T0T0 291 aa23.7■■□□□ 1.38
CBWD3-202ENST00000377342 TRIM9Q9C026 710 aa23.7■■□□□ 1.38
CBWD3-202ENST00000377342 NUP62CLQ9H1M0 184 aa23.7■■□□□ 1.38
CBWD3-202ENST00000377342 BLZF1Q9H2G9 400 aa23.7■■□□□ 1.38
CBWD3-202ENST00000377342 DHX33Q9H6R0 707 aaKnown RBP23.7■■□□□ 1.38
CBWD3-202ENST00000377342 XPNPEP1Q9NQW7 623 aa23.7■■□□□ 1.38
CBWD3-202ENST00000377342 NPHP3-ACAD11A0A0J9YXS1 232 aa23.69■■□□□ 1.38
CBWD3-202ENST00000377342 C22orf31O95567 290 aa23.69■■□□□ 1.38
CBWD3-202ENST00000377342 PNOCQ13519 176 aa23.69■■□□□ 1.38
CBWD3-202ENST00000377342 CUL4BQ13620 913 aa23.69■■□□□ 1.38
CBWD3-202ENST00000377342 POSTNQ15063 836 aa23.69■■□□□ 1.38
CBWD3-202ENST00000377342 CAMK4Q16566 473 aa23.69■■□□□ 1.38
CBWD3-202ENST00000377342 ZNF484Q5JVG2 852 aa23.69■■□□□ 1.38
CBWD3-202ENST00000377342 ELOA2Q8IYF1 753 aaPredicted RBP23.69■■□□□ 1.38
CBWD3-202ENST00000377342 PDLIM7Q9NR12 457 aa23.69■■□□□ 1.38
CBWD3-202ENST00000377342 SETD4Q9NVD3 440 aa23.69■■□□□ 1.38
CBWD3-202ENST00000377342 HDAC6Q9UBN7 1215 aa23.69■■□□□ 1.38
CBWD3-202ENST00000377342 TFRCP02786 760 aaKnown RBP23.68■■□□□ 1.38
CBWD3-202ENST00000377342 IGBP1P78318 339 aa23.68■■□□□ 1.38
CBWD3-202ENST00000377342 ADAM17P78536 824 aa23.68■■□□□ 1.38
CBWD3-202ENST00000377342 EMC2Q15006 297 aa23.68■■□□□ 1.38
CBWD3-202ENST00000377342 KANK3Q6NY19 840 aa23.68■■□□□ 1.38
CBWD3-202ENST00000377342 CAVIN1Q6NZI2 390 aaKnown RBP23.68■■□□□ 1.38
CBWD3-202ENST00000377342 DDX12PQ92771 950 aa23.68■■□□□ 1.38
CBWD3-202ENST00000377342 ERCC4Q92889 916 aaPredicted RBP23.68■■□□□ 1.38
CBWD3-202ENST00000377342 DNAJC19Q96DA6 116 aa23.68■■□□□ 1.38
CBWD3-202ENST00000377342 GLT1D1Q96MS3 346 aa23.68■■□□□ 1.38
CBWD3-202ENST00000377342 REEP2Q9BRK0 252 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms