RNA–Protein interactions for RNA: ENST00000376233.7

ZNF549-202, Transcript of zinc finger protein 549, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF549, Length 4,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549-202ENST00000376233 CNKSR1Q969H4 720 aa11.54□□□□□ -0.56
ZNF549-202ENST00000376233 PTPN22Q9Y2R2 807 aa11.54□□□□□ -0.56
ZNF549-202ENST00000376233 GJA3Q9Y6H8 435 aa11.54□□□□□ -0.56
ZNF549-202ENST00000376233 MSH4O15457 936 aa11.54□□□□□ -0.56
ZNF549-202ENST00000376233 KCNA1Q09470 495 aa11.54□□□□□ -0.56
ZNF549-202ENST00000376233 MCTP2Q6DN12 878 aa11.54□□□□□ -0.56
ZNF549-202ENST00000376233 APOBEC3HQ6NTF7 200 aaKnown RBP11.54□□□□□ -0.56
ZNF549-202ENST00000376233 CCDC114Q96M63 670 aa11.54□□□□□ -0.56
ZNF549-202ENST00000376233 FBXO28Q9NVF7 368 aa11.54□□□□□ -0.56
ZNF549-202ENST00000376233 AMACRQ9UHK6 382 aa11.54□□□□□ -0.56
ZNF549-202ENST00000376233 SMTNP53814 917 aa11.53□□□□□ -0.56
ZNF549-202ENST00000376233 PLTPP55058 493 aa11.53□□□□□ -0.56
ZNF549-202ENST00000376233 LRRC55Q6ZSA7 311 aa11.53□□□□□ -0.56
ZNF549-202ENST00000376233 UBL4BQ8N7F7 174 aa11.53□□□□□ -0.56
ZNF549-202ENST00000376233 JDP2Q8WYK2 163 aa11.53□□□□□ -0.56
ZNF549-202ENST00000376233 FAM163AQ96GL9 167 aaPredicted RBP11.53□□□□□ -0.56
ZNF549-202ENST00000376233 NYAP2Q9P242 653 aa11.53□□□□□ -0.56
ZNF549-202ENST00000376233 ADAMTS7Q9UKP4 1686 aa11.53□□□□□ -0.56
ZNF549-202ENST00000376233 POTEJP0CG39 1038 aa11.53□□□□□ -0.56
ZNF549-202ENST00000376233 RPA1P27694 616 aa11.53□□□□□ -0.56
ZNF549-202ENST00000376233 DHX9Q08211 1270 aaKnown RBP11.53□□□□□ -0.56
ZNF549-202ENST00000376233 MKRN4PQ13434 485 aaPredicted RBP11.53□□□□□ -0.56
ZNF549-202ENST00000376233 EDEM3Q9BZQ6 932 aa11.53□□□□□ -0.56
ZNF549-202ENST00000376233 RNF14Q9UBS8 474 aa11.53□□□□□ -0.56
ZNF549-202ENST00000376233 PLAAQ9Y263 795 aa11.53□□□□□ -0.56
ZNF549-202ENST00000376233 SUGT1Q9Y2Z0 365 aa11.53□□□□□ -0.56
ZNF549-202ENST00000376233 DUOX1Q9NRD9 1551 aa11.53□□□□□ -0.56
ZNF549-202ENST00000376233 M0R2N6 131 aa11.53□□□□□ -0.56
ZNF549-202ENST00000376233 POLRMTO00411 1230 aaKnown RBP11.53□□□□□ -0.56
ZNF549-202ENST00000376233 AKAP3O75969 853 aa11.53□□□□□ -0.56
ZNF549-202ENST00000376233 FOXR1Q6PIV2 292 aa11.53□□□□□ -0.56
ZNF549-202ENST00000376233 CREG2Q8IUH2 290 aa11.53□□□□□ -0.56
ZNF549-202ENST00000376233 USTQ9Y2C2 406 aa11.53□□□□□ -0.56
ZNF549-202ENST00000376233 FAM86B1E9PN63 330 aa11.52□□□□□ -0.56
ZNF549-202ENST00000376233 PPFIA4O75335 1185 aa11.52□□□□□ -0.56
ZNF549-202ENST00000376233 FAM86B2P0C5J1 330 aa11.52□□□□□ -0.56
ZNF549-202ENST00000376233 LMNB1P20700 586 aa11.52□□□□□ -0.56
ZNF549-202ENST00000376233 PEX3P56589 373 aa11.52□□□□□ -0.56
ZNF549-202ENST00000376233 IRX5P78411 483 aaPredicted RBP11.52□□□□□ -0.56
ZNF549-202ENST00000376233 KCNMA1Q12791 1236 aa11.52□□□□□ -0.56
ZNF549-202ENST00000376233 GIT2Q14161 759 aa11.52□□□□□ -0.56
ZNF549-202ENST00000376233 OR2W6PQ8NHA6 318 aa11.52□□□□□ -0.56
ZNF549-202ENST00000376233 DNAJC19Q96DA6 116 aa11.52□□□□□ -0.56
ZNF549-202ENST00000376233 PRMT6Q96LA8 375 aaPredicted RBP11.52□□□□□ -0.56
ZNF549-202ENST00000376233 NAP1L3Q99457 506 aaPredicted RBP11.52□□□□□ -0.56
ZNF549-202ENST00000376233 LXNQ9BS40 222 aa11.52□□□□□ -0.56
ZNF549-202ENST00000376233 TLR10Q9BXR5 811 aa11.52□□□□□ -0.56
ZNF549-202ENST00000376233 ZNF341Q9BYN7 854 aa11.52□□□□□ -0.56
ZNF549-202ENST00000376233 WDR11Q9BZH6 1224 aa11.52□□□□□ -0.56
ZNF549-202ENST00000376233 IKZF4Q9H2S9 585 aa11.52□□□□□ -0.56
ZNF549-202ENST00000376233 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.52□□□□□ -0.56
ZNF549-202ENST00000376233 MTRF1LQ9UGC7 380 aaKnown RBP11.52□□□□□ -0.56
ZNF549-202ENST00000376233 MTUS1Q9ULD2 1270 aa11.52□□□□□ -0.56
ZNF549-202ENST00000376233 GAKO14976 1311 aa11.52□□□□□ -0.56
ZNF549-202ENST00000376233 IPO5O00410 1097 aaKnown RBP11.52□□□□□ -0.57
ZNF549-202ENST00000376233 CALCOCO2Q13137 446 aa11.52□□□□□ -0.57
ZNF549-202ENST00000376233 TMEM119Q4V9L6 283 aa11.52□□□□□ -0.57
ZNF549-202ENST00000376233 SLC27A3Q5K4L6 730 aa11.52□□□□□ -0.57
ZNF549-202ENST00000376233 RUFY4Q6ZNE9 571 aa11.52□□□□□ -0.57
ZNF549-202ENST00000376233 TRIM59Q8IWR1 403 aa11.52□□□□□ -0.57
ZNF549-202ENST00000376233 MAGOHBQ96A72 148 aaKnown RBP11.52□□□□□ -0.57
ZNF549-202ENST00000376233 FNBP1Q96RU3 617 aa11.52□□□□□ -0.57
ZNF549-202ENST00000376233 PAIP2Q9BPZ3 127 aaKnown RBP11.52□□□□□ -0.57
ZNF549-202ENST00000376233 ASIC3Q9UHC3 531 aa11.52□□□□□ -0.57
ZNF549-202ENST00000376233 MYH7P12883 1935 aa11.52□□□□□ -0.57
ZNF549-202ENST00000376233 PDXKO00764 312 aa11.52□□□□□ -0.57
ZNF549-202ENST00000376233 RAD51CO43502 376 aa11.52□□□□□ -0.57
ZNF549-202ENST00000376233 KIF4AO95239 1232 aa11.52□□□□□ -0.57
ZNF549-202ENST00000376233 EYA4O95677 639 aa11.52□□□□□ -0.57
ZNF549-202ENST00000376233 PRELPP51888 382 aa11.52□□□□□ -0.57
ZNF549-202ENST00000376233 NAB2Q15742 525 aa11.52□□□□□ -0.57
ZNF549-202ENST00000376233 KLHDC7AQ5VTJ3 777 aa11.52□□□□□ -0.57
ZNF549-202ENST00000376233 PADI6Q6TGC4 694 aa11.52□□□□□ -0.57
ZNF549-202ENST00000376233 AEBP2Q6ZN18 517 aaPredicted RBP11.52□□□□□ -0.57
ZNF549-202ENST00000376233 CCDC121Q6ZUS5 278 aa11.52□□□□□ -0.57
ZNF549-202ENST00000376233 FRMD5Q7Z6J6 570 aa11.52□□□□□ -0.57
ZNF549-202ENST00000376233 EVI5O60447 810 aa11.51□□□□□ -0.57
ZNF549-202ENST00000376233 NEFHP12036 1026 aa11.51□□□□□ -0.57
ZNF549-202ENST00000376233 NR1D1P20393 614 aa11.51□□□□□ -0.57
ZNF549-202ENST00000376233 COPB2P35606 906 aa11.51□□□□□ -0.57
ZNF549-202ENST00000376233 MAP2K1Q02750 393 aaPredicted RBP11.51□□□□□ -0.57
ZNF549-202ENST00000376233 COL23A1Q86Y22 540 aaPredicted RBP11.51□□□□□ -0.57
ZNF549-202ENST00000376233 MRRFQ96E11 262 aaKnown RBP11.51□□□□□ -0.57
ZNF549-202ENST00000376233 NOC2LQ9Y3T9 749 aaKnown RBP11.51□□□□□ -0.57
ZNF549-202ENST00000376233 SART1O43290 800 aaKnown RBP11.51□□□□□ -0.57
ZNF549-202ENST00000376233 DAPK3O43293 454 aa11.51□□□□□ -0.57
ZNF549-202ENST00000376233 GLI1P08151 1106 aa11.51□□□□□ -0.57
ZNF549-202ENST00000376233 SLCO1A2P46721 670 aa11.51□□□□□ -0.57
ZNF549-202ENST00000376233 GALCP54803 685 aa11.51□□□□□ -0.57
ZNF549-202ENST00000376233 GUCY1A3Q02108 690 aa11.51□□□□□ -0.57
ZNF549-202ENST00000376233 EDRF1Q3B7T1 1238 aa11.51□□□□□ -0.57
ZNF549-202ENST00000376233 GRIPAP1Q4V328 841 aa11.51□□□□□ -0.57
ZNF549-202ENST00000376233 STRIP1Q5VSL9 837 aa11.51□□□□□ -0.57
ZNF549-202ENST00000376233 ALS2CLQ60I27 953 aa11.51□□□□□ -0.57
ZNF549-202ENST00000376233 GSTA5Q7RTV2 222 aa11.51□□□□□ -0.57
ZNF549-202ENST00000376233 USP37Q86T82 979 aa11.51□□□□□ -0.57
ZNF549-202ENST00000376233 MMGT1Q8N4V1 131 aa11.51□□□□□ -0.57
ZNF549-202ENST00000376233 ARL8AQ96BM9 186 aa11.51□□□□□ -0.57
ZNF549-202ENST00000376233 PBKQ96KB5 322 aa11.51□□□□□ -0.57
ZNF549-202ENST00000376233 ZIM3Q96PE6 472 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms