RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 C2orf71A6NGG8 1288 aa20.18■□□□□ 0.82
H2AFX-201ENST00000375167 NARSO43776 548 aaKnown RBP20.18■□□□□ 0.82
H2AFX-201ENST00000375167 PDE4AP27815 886 aa20.18■□□□□ 0.82
H2AFX-201ENST00000375167 NONOQ15233 471 aaKnown RBP eCLIP20.18■□□□□ 0.82
H2AFX-201ENST00000375167 FAM102BQ5T8I3 360 aa20.18■□□□□ 0.82
H2AFX-201ENST00000375167 MRPL43Q8N983 215 aaKnown RBP20.18■□□□□ 0.82
H2AFX-201ENST00000375167 TMX1Q9H3N1 280 aa20.18■□□□□ 0.82
H2AFX-201ENST00000375167 C1orf112Q9NSG2 853 aa20.18■□□□□ 0.82
H2AFX-201ENST00000375167 SIT1Q9Y3P8 196 aa20.18■□□□□ 0.82
H2AFX-201ENST00000375167 PCDHA1Q9Y5I3 950 aa20.18■□□□□ 0.82
H2AFX-201ENST00000375167 OPLAHO14841 1288 aa20.17■□□□□ 0.82
H2AFX-201ENST00000375167 HOXA13P31271 388 aaPredicted RBP20.17■□□□□ 0.82
H2AFX-201ENST00000375167 BMS1Q14692 1282 aaKnown RBP20.17■□□□□ 0.82
H2AFX-201ENST00000375167 FAM43BQ6ZT52 329 aaPredicted RBP20.17■□□□□ 0.82
H2AFX-201ENST00000375167 SIRT2Q8IXJ6 389 aa20.17■□□□□ 0.82
H2AFX-201ENST00000375167 ZNF558Q96NG5 402 aa20.17■□□□□ 0.82
H2AFX-201ENST00000375167 DENND3A2RUS2 1198 aa20.16■□□□□ 0.82
H2AFX-201ENST00000375167 FOXP2O15409 715 aa20.16■□□□□ 0.82
H2AFX-201ENST00000375167 HOXB3P14651 431 aaPredicted RBP20.16■□□□□ 0.82
H2AFX-201ENST00000375167 TMEM62Q0P6H9 643 aa20.16■□□□□ 0.82
H2AFX-201ENST00000375167 ZMYM1Q5SVZ6 1142 aa20.16■□□□□ 0.82
H2AFX-201ENST00000375167 PHLDB3Q6NSJ2 640 aa20.16■□□□□ 0.82
H2AFX-201ENST00000375167 KANK3Q6NY19 840 aa20.16■□□□□ 0.82
H2AFX-201ENST00000375167 KCNT2Q6UVM3 1135 aa20.16■□□□□ 0.82
H2AFX-201ENST00000375167 SAMD3Q8N6K7 520 aa20.16■□□□□ 0.82
H2AFX-201ENST00000375167 TMEM87AQ8NBN3 555 aa20.16■□□□□ 0.82
H2AFX-201ENST00000375167 AMNQ9BXJ7 453 aa20.16■□□□□ 0.82
H2AFX-201ENST00000375167 DLGAP2Q9P1A6 1054 aa20.16■□□□□ 0.82
H2AFX-201ENST00000375167 FIBPO43427 364 aa20.15■□□□□ 0.82
H2AFX-201ENST00000375167 MARK3P27448 753 aa20.15■□□□□ 0.82
H2AFX-201ENST00000375167 IGBP1P78318 339 aa20.15■□□□□ 0.82
H2AFX-201ENST00000375167 NFX1Q12986 1120 aaKnown RBP20.15■□□□□ 0.82
H2AFX-201ENST00000375167 ZNF528Q3MIS6 628 aa20.15■□□□□ 0.82
H2AFX-201ENST00000375167 MARCH8Q5T0T0 291 aa20.15■□□□□ 0.82
H2AFX-201ENST00000375167 TMC5Q6UXY8 1006 aa20.15■□□□□ 0.82
H2AFX-201ENST00000375167 INPP4AQ96PE3 977 aaPredicted RBP20.15■□□□□ 0.82
H2AFX-201ENST00000375167 ERAP1Q9NZ08 941 aa20.15■□□□□ 0.82
H2AFX-201ENST00000375167 SPG21Q9NZD8 308 aa20.15■□□□□ 0.82
H2AFX-201ENST00000375167 ANGPTL2Q9UKU9 493 aa20.15■□□□□ 0.82
H2AFX-201ENST00000375167 SMG5Q9UPR3 1016 aaKnown RBP20.15■□□□□ 0.82
H2AFX-201ENST00000375167 SPDYE4A6NLX3 237 aa20.14■□□□□ 0.81
H2AFX-201ENST00000375167 SPATA31C2B4DYI2 1134 aa20.14■□□□□ 0.81
H2AFX-201ENST00000375167 SMARCA5O60264 1052 aaPredicted RBP20.14■□□□□ 0.81
H2AFX-201ENST00000375167 STAM2O75886 525 aa20.14■□□□□ 0.81
H2AFX-201ENST00000375167 TCF7P36402 384 aaPredicted RBP20.14■□□□□ 0.81
H2AFX-201ENST00000375167 ASPRV1Q53RT3 343 aa20.14■□□□□ 0.81
H2AFX-201ENST00000375167 TSHZ3Q63HK5 1081 aa20.14■□□□□ 0.81
H2AFX-201ENST00000375167 SLC24A5Q71RS6 500 aa20.14■□□□□ 0.81
H2AFX-201ENST00000375167 CABP7Q86V35 215 aa20.14■□□□□ 0.81
H2AFX-201ENST00000375167 CELF4Q9BZC1 486 aaKnown RBP20.14■□□□□ 0.81
H2AFX-201ENST00000375167 ATP6V0A4Q9HBG4 840 aa20.14■□□□□ 0.81
H2AFX-201ENST00000375167 TELO2Q9Y4R8 837 aa20.14■□□□□ 0.81
H2AFX-201ENST00000375167 PCDHGA2Q9Y5H1 932 aa20.14■□□□□ 0.81
H2AFX-201ENST00000375167 MIA3Q5JRA6 1907 aa20.13■□□□□ 0.81
H2AFX-201ENST00000375167 POTEMA6NI47 508 aa20.13■□□□□ 0.81
H2AFX-201ENST00000375167 FGFR1P11362 822 aa20.13■□□□□ 0.81
H2AFX-201ENST00000375167 TMEM266Q2M3C6 531 aa20.13■□□□□ 0.81
H2AFX-201ENST00000375167 POTEGQ6S5H5 508 aa20.13■□□□□ 0.81
H2AFX-201ENST00000375167 ATRIPQ8WXE1 791 aa20.13■□□□□ 0.81
H2AFX-201ENST00000375167 ADAM2Q99965 735 aa20.13■□□□□ 0.81
H2AFX-201ENST00000375167 JMJD4Q9H9V9 463 aa20.13■□□□□ 0.81
H2AFX-201ENST00000375167 VAT1LQ9HCJ6 419 aa20.13■□□□□ 0.81
H2AFX-201ENST00000375167 RRN3P2A6NIE6 340 aa20.12■□□□□ 0.81
H2AFX-201ENST00000375167 MGEA5O60502 916 aa20.12■□□□□ 0.81
H2AFX-201ENST00000375167 EPCAMP16422 314 aa20.12■□□□□ 0.81
H2AFX-201ENST00000375167 PBX3P40426 434 aa20.12■□□□□ 0.81
H2AFX-201ENST00000375167 GPR149Q86SP6 731 aa20.12■□□□□ 0.81
H2AFX-201ENST00000375167 FCHSD1Q86WN1 690 aa20.12■□□□□ 0.81
H2AFX-201ENST00000375167 LRRC43Q8N309 656 aa20.12■□□□□ 0.81
H2AFX-201ENST00000375167 GLG1Q92896 1179 aa20.12■□□□□ 0.81
H2AFX-201ENST00000375167 TMEM117Q9H0C3 514 aa20.12■□□□□ 0.81
H2AFX-201ENST00000375167 SFXN1Q9H9B4 322 aa20.12■□□□□ 0.81
H2AFX-201ENST00000375167 ARHGEF3Q9NR81 526 aa20.12■□□□□ 0.81
H2AFX-201ENST00000375167 RGS18Q9NS28 235 aa20.12■□□□□ 0.81
H2AFX-201ENST00000375167 TMEM161AQ9NX61 479 aa20.12■□□□□ 0.81
H2AFX-201ENST00000375167 KDM3AQ9Y4C1 1321 aa20.12■□□□□ 0.81
H2AFX-201ENST00000375167 C2orf16Q68DN1 1984 aa20.12■□□□□ 0.81
H2AFX-201ENST00000375167 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.11■□□□□ 0.81
H2AFX-201ENST00000375167 C9IYK1 514 aa20.11■□□□□ 0.81
H2AFX-201ENST00000375167 SRFP11831 508 aa20.11■□□□□ 0.81
H2AFX-201ENST00000375167 SEMA3FQ13275 785 aa20.11■□□□□ 0.81
H2AFX-201ENST00000375167 MAML2Q8IZL2 1156 aaPredicted RBP20.11■□□□□ 0.81
H2AFX-201ENST00000375167 PNMA1Q8ND90 353 aa20.11■□□□□ 0.81
H2AFX-201ENST00000375167 NETO1Q8TDF5 533 aa20.11■□□□□ 0.81
H2AFX-201ENST00000375167 ZBTB10Q96DT7 871 aa20.11■□□□□ 0.81
H2AFX-201ENST00000375167 GMEB2Q9UKD1 530 aa20.11■□□□□ 0.81
H2AFX-201ENST00000375167 FBXO4Q9UKT5 387 aa20.11■□□□□ 0.81
H2AFX-201ENST00000375167 ZFYVE26Q68DK2 2539 aa20.11■□□□□ 0.81
H2AFX-201ENST00000375167 GCOM1H8Y6P7 765 aaPredicted RBP20.1■□□□□ 0.81
H2AFX-201ENST00000375167 HOXA2O43364 376 aa20.1■□□□□ 0.81
H2AFX-201ENST00000375167 POLR2MP0CAP2 368 aa20.1■□□□□ 0.81
H2AFX-201ENST00000375167 KRT76Q01546 638 aa20.1■□□□□ 0.81
H2AFX-201ENST00000375167 ODR4Q5SWX8 454 aa20.1■□□□□ 0.81
H2AFX-201ENST00000375167 GIMAP8Q8ND71 665 aaPredicted RBP20.1■□□□□ 0.81
H2AFX-201ENST00000375167 PJA1Q8NG27 643 aa20.1■□□□□ 0.81
H2AFX-201ENST00000375167 SENP7Q9BQF6 1050 aa20.1■□□□□ 0.81
H2AFX-201ENST00000375167 EPC1Q9H2F5 836 aa20.1■□□□□ 0.81
H2AFX-201ENST00000375167 PATJQ8NI35 1801 aa20.1■□□□□ 0.81
H2AFX-201ENST00000375167 TRIM6-TRIM34B2RNG4 842 aa20.09■□□□□ 0.81
H2AFX-201ENST00000375167 SLC30A4O14863 429 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms