RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 TRAF1Q13077 416 aa12.45□□□□□ -0.42
PTPN20-204ENST00000374346 PDCLQ13371 301 aa12.45□□□□□ -0.42
PTPN20-204ENST00000374346 EPHA7Q15375 998 aa12.45□□□□□ -0.42
PTPN20-204ENST00000374346 CEP85LQ5SZL2 805 aa12.45□□□□□ -0.42
PTPN20-204ENST00000374346 TTC19Q6DKK2 380 aaPredicted RBP12.45□□□□□ -0.42
PTPN20-204ENST00000374346 STXBP4Q6ZWJ1 553 aa12.45□□□□□ -0.42
PTPN20-204ENST00000374346 CERS5Q8N5B7 392 aa12.45□□□□□ -0.42
PTPN20-204ENST00000374346 LRRC57Q8N9N7 239 aa12.45□□□□□ -0.42
PTPN20-204ENST00000374346 TPCN2Q8NHX9 752 aa12.45□□□□□ -0.42
PTPN20-204ENST00000374346 SCFD2Q8WU76 684 aa12.45□□□□□ -0.42
PTPN20-204ENST00000374346 CRYGNQ8WXF5 182 aa12.45□□□□□ -0.42
PTPN20-204ENST00000374346 POLR3CQ9BUI4 534 aaPredicted RBP12.45□□□□□ -0.42
PTPN20-204ENST00000374346 EPN3Q9H201 632 aa12.45□□□□□ -0.42
PTPN20-204ENST00000374346 SLITRK6Q9H5Y7 841 aa12.45□□□□□ -0.42
PTPN20-204ENST00000374346 OLFML3Q9NRN5 406 aa12.45□□□□□ -0.42
PTPN20-204ENST00000374346 SUCLA2Q9P2R7 463 aaPredicted RBP12.45□□□□□ -0.42
PTPN20-204ENST00000374346 KLRG2A4D1S0 409 aaPredicted RBP12.45□□□□□ -0.42
PTPN20-204ENST00000374346 KRIT1O00522 736 aa12.45□□□□□ -0.42
PTPN20-204ENST00000374346 EYA4O95677 639 aa12.45□□□□□ -0.42
PTPN20-204ENST00000374346 SPATA31C1P0DKV0 1188 aa12.45□□□□□ -0.42
PTPN20-204ENST00000374346 PSMC6P62333 389 aa12.45□□□□□ -0.42
PTPN20-204ENST00000374346 DAAM2Q86T65 1068 aa12.45□□□□□ -0.42
PTPN20-204ENST00000374346 BHMT2Q9H2M3 363 aa12.45□□□□□ -0.42
PTPN20-204ENST00000374346 PLAAQ9Y263 795 aa12.45□□□□□ -0.42
PTPN20-204ENST00000374346 SRRM3A6NNA2 597 aaPredicted RBP12.44□□□□□ -0.42
PTPN20-204ENST00000374346 ANKRD65E5RJM6 399 aa12.44□□□□□ -0.42
PTPN20-204ENST00000374346 EIF3DO15371 548 aaKnown RBP eCLIP12.44□□□□□ -0.42
PTPN20-204ENST00000374346 SART1O43290 800 aaKnown RBP12.44□□□□□ -0.42
PTPN20-204ENST00000374346 LMNB1P20700 586 aa12.44□□□□□ -0.42
PTPN20-204ENST00000374346 INPP5BP32019 993 aa12.44□□□□□ -0.42
PTPN20-204ENST00000374346 LSP1P33241 339 aa12.44□□□□□ -0.42
PTPN20-204ENST00000374346 PSMC2P35998 433 aaKnown RBP12.44□□□□□ -0.42
PTPN20-204ENST00000374346 JAM2P57087 298 aa12.44□□□□□ -0.42
PTPN20-204ENST00000374346 ICA1Q05084 483 aa12.44□□□□□ -0.42
PTPN20-204ENST00000374346 CLUL1Q15846 466 aa12.44□□□□□ -0.42
PTPN20-204ENST00000374346 PPP2R5EQ16537 467 aa12.44□□□□□ -0.42
PTPN20-204ENST00000374346 APOBEC3HQ6NTF7 200 aaKnown RBP12.44□□□□□ -0.42
PTPN20-204ENST00000374346 TMEM179Q6ZVK1 233 aa12.44□□□□□ -0.42
PTPN20-204ENST00000374346 TEX2Q8IWB9 1127 aa12.44□□□□□ -0.42
PTPN20-204ENST00000374346 SH2D3CQ8N5H7 860 aa12.44□□□□□ -0.42
PTPN20-204ENST00000374346 SLC35C1Q96A29 364 aa12.44□□□□□ -0.42
PTPN20-204ENST00000374346 DIS3Q9Y2L1 958 aaKnown RBP12.44□□□□□ -0.42
PTPN20-204ENST00000374346 NOC2LQ9Y3T9 749 aaKnown RBP12.44□□□□□ -0.42
PTPN20-204ENST00000374346 PPP1R37O75864 691 aa12.44□□□□□ -0.42
PTPN20-204ENST00000374346 FAM13AO94988 1023 aa12.44□□□□□ -0.42
PTPN20-204ENST00000374346 CIITAP33076 1130 aa12.44□□□□□ -0.42
PTPN20-204ENST00000374346 CTNNA1P35221 906 aaKnown RBP12.44□□□□□ -0.42
PTPN20-204ENST00000374346 BIRC3Q13489 604 aa12.44□□□□□ -0.42
PTPN20-204ENST00000374346 GMCL1P1Q8NEA9 526 aa12.44□□□□□ -0.42
PTPN20-204ENST00000374346 RBM46Q8TBY0 533 aaKnown RBP12.44□□□□□ -0.42
PTPN20-204ENST00000374346 PIK3R5Q8WYR1 880 aa12.44□□□□□ -0.42
PTPN20-204ENST00000374346 RNPC3Q96LT9 517 aaKnown RBP12.44□□□□□ -0.42
PTPN20-204ENST00000374346 NAP1L3Q99457 506 aaPredicted RBP12.44□□□□□ -0.42
PTPN20-204ENST00000374346 AMFRQ9UKV5 643 aa12.44□□□□□ -0.42
PTPN20-204ENST00000374346 UTP11Q9Y3A2 253 aaKnown RBP12.44□□□□□ -0.42
PTPN20-204ENST00000374346 DAAM1Q9Y4D1 1078 aa12.44□□□□□ -0.42
PTPN20-204ENST00000374346 PCDHB13Q9Y5F0 798 aa12.44□□□□□ -0.42
PTPN20-204ENST00000374346 ASTN1O14525 1302 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 HMGB2P26583 209 aaKnown RBP12.43□□□□□ -0.42
PTPN20-204ENST00000374346 MDH1P40925 334 aaKnown RBP12.43□□□□□ -0.42
PTPN20-204ENST00000374346 CRKP46108 304 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 USH1GQ495M9 461 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 DPY19L2P1Q6NXN4 242 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 SLFN11Q7Z7L1 901 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 PACS2Q86VP3 889 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 METTL13Q8N6R0 699 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 ZDHHC15Q96MV8 337 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 MKNK1Q9BUB5 465 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 FAM86B1E9PN63 330 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 F5H6K3 240 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 MSH4O15457 936 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 FAM86B2P0C5J1 330 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 HOXD13P35453 343 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 USP8P40818 1118 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 CDR1P51861 262 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 ERVK-9P63128 1117 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 CYP4A11Q02928 519 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 KLRC3Q07444 240 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 NFIAQ12857 509 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 NFIL3Q16649 462 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 HS2ST1Q7LGA3 356 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 FAM186BQ8IYM0 893 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 RASGEF1CQ8N431 466 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 OTUD6BQ8N6M0 293 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 LENG9Q96B70 501 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 GMCL1Q96IK5 515 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 EIF2AK1Q9BQI3 630 aaKnown RBP12.43□□□□□ -0.42
PTPN20-204ENST00000374346 AP1M1Q9BXS5 423 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 CENPHQ9H3R5 247 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 RABEP2Q9H5N1 569 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 TMBIM4Q9HC24 238 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 TUFT1Q9NNX1 390 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 FAM114A2Q9NRY5 505 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 LRRC4BQ9NT99 713 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 FRMD4BQ9Y2L6 1034 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 LTBP4Q8N2S1 1624 aa12.43□□□□□ -0.42
PTPN20-204ENST00000374346 UBE4BO95155 1302 aa12.42□□□□□ -0.42
PTPN20-204ENST00000374346 GOLGA6L10A0A0M3HER8 536 aa12.42□□□□□ -0.42
PTPN20-204ENST00000374346 POLRMTO00411 1230 aaKnown RBP12.42□□□□□ -0.42
PTPN20-204ENST00000374346 ALDH1B1P30837 517 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms