RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 POLR3CQ9BUI4 534 aaPredicted RBP15.27■□□□□ 0.03
LMX1B-202ENST00000373474 ZNF408Q9H9D4 720 aa15.27■□□□□ 0.03
LMX1B-202ENST00000373474 MAPK13O15264 365 aa15.26■□□□□ 0.03
LMX1B-202ENST00000373474 GFPT1Q06210 699 aaPredicted RBP15.26■□□□□ 0.03
LMX1B-202ENST00000373474 PPP1R18Q6NYC8 613 aa15.26■□□□□ 0.03
LMX1B-202ENST00000373474 GADL1Q6ZQY3 521 aa15.26■□□□□ 0.03
LMX1B-202ENST00000373474 ARMC2Q8NEN0 867 aa15.26■□□□□ 0.03
LMX1B-202ENST00000373474 KCNF1Q9H3M0 494 aa15.26■□□□□ 0.03
LMX1B-202ENST00000373474 SLC5A4Q9NY91 659 aa15.26■□□□□ 0.03
LMX1B-202ENST00000373474 SPAG7O75391 227 aa15.26■□□□□ 0.03
LMX1B-202ENST00000373474 KCNA4P22459 653 aa15.26■□□□□ 0.03
LMX1B-202ENST00000373474 ECE1P42892 770 aa15.26■□□□□ 0.03
LMX1B-202ENST00000373474 PDE1BQ01064 536 aa15.26■□□□□ 0.03
LMX1B-202ENST00000373474 IL1RL1Q01638 556 aa15.26■□□□□ 0.03
LMX1B-202ENST00000373474 SEMA3FQ13275 785 aa15.26■□□□□ 0.03
LMX1B-202ENST00000373474 GRM4Q14833 912 aa15.26■□□□□ 0.03
LMX1B-202ENST00000373474 TRIP13Q15645 432 aaPredicted RBP15.26■□□□□ 0.03
LMX1B-202ENST00000373474 RAB44Q7Z6P3 723 aaPredicted RBP15.26■□□□□ 0.03
LMX1B-202ENST00000373474 EXOC8Q8IYI6 725 aa15.26■□□□□ 0.03
LMX1B-202ENST00000373474 TBK1Q9UHD2 729 aa15.26■□□□□ 0.03
LMX1B-202ENST00000373474 IPO11Q9UI26 975 aaKnown RBP15.26■□□□□ 0.03
LMX1B-202ENST00000373474 FOXO4P98177 505 aa15.26■□□□□ 0.03
LMX1B-202ENST00000373474 TBC1D10BQ4KMP7 808 aaPredicted RBP15.26■□□□□ 0.03
LMX1B-202ENST00000373474 EXOC1LA0A1B0GW35 172 aa15.26■□□□□ 0.03
LMX1B-202ENST00000373474 DCTN3O75935 186 aa15.26■□□□□ 0.03
LMX1B-202ENST00000373474 MT-ND3P03897 115 aa15.26■□□□□ 0.03
LMX1B-202ENST00000373474 CYP2D6P10635 497 aa15.26■□□□□ 0.03
LMX1B-202ENST00000373474 PLCB4Q15147 1175 aa15.26■□□□□ 0.03
LMX1B-202ENST00000373474 MXD3Q9BW11 206 aa15.26■□□□□ 0.03
LMX1B-202ENST00000373474 ESYT2A0FGR8 921 aa15.26■□□□□ 0.03
LMX1B-202ENST00000373474 CHGBP05060 677 aa15.26■□□□□ 0.03
LMX1B-202ENST00000373474 PLS3P13797 630 aa15.26■□□□□ 0.03
LMX1B-202ENST00000373474 KCTD6Q8NC69 237 aa15.26■□□□□ 0.03
LMX1B-202ENST00000373474 CLRN2A0PK11 232 aa15.25■□□□□ 0.03
LMX1B-202ENST00000373474 CYP27B1O15528 508 aa15.25■□□□□ 0.03
LMX1B-202ENST00000373474 EXOSC10Q01780 885 aaKnown RBP15.25■□□□□ 0.03
LMX1B-202ENST00000373474 ITKQ08881 620 aa15.25■□□□□ 0.03
LMX1B-202ENST00000373474 DARS2Q6PI48 645 aaKnown RBP15.25■□□□□ 0.03
LMX1B-202ENST00000373474 NUDCD3Q8IVD9 361 aa15.25■□□□□ 0.03
LMX1B-202ENST00000373474 CRB1P82279 1406 aa15.25■□□□□ 0.03
LMX1B-202ENST00000373474 SYNGAP1Q96PV0 1343 aa15.25■□□□□ 0.03
LMX1B-202ENST00000373474 NOP14P78316 857 aaKnown RBP15.25■□□□□ 0.03
LMX1B-202ENST00000373474 COASYQ13057 564 aa15.25■□□□□ 0.03
LMX1B-202ENST00000373474 CC2D2BQ6DHV5 1058 aa15.25■□□□□ 0.03
LMX1B-202ENST00000373474 DNAJC12Q9UKB3 198 aa15.25■□□□□ 0.03
LMX1B-202ENST00000373474 ANGPTL3Q9Y5C1 460 aa15.25■□□□□ 0.03
LMX1B-202ENST00000373474 USP17L5A8MUK1 530 aa15.25■□□□□ 0.03
LMX1B-202ENST00000373474 TADA3O75528 432 aa15.25■□□□□ 0.03
LMX1B-202ENST00000373474 MCF2P10911 925 aa15.25■□□□□ 0.03
LMX1B-202ENST00000373474 SAT1P21673 171 aa15.25■□□□□ 0.03
LMX1B-202ENST00000373474 FAM160B2Q86V87 743 aa15.25■□□□□ 0.03
LMX1B-202ENST00000373474 OSBPL9Q96SU4 736 aa15.25■□□□□ 0.03
LMX1B-202ENST00000373474 SPC25Q9HBM1 224 aa15.25■□□□□ 0.03
LMX1B-202ENST00000373474 ARHGAP10A1A4S6 786 aa15.25■□□□□ 0.03
LMX1B-202ENST00000373474 DYNLT1P63172 113 aa15.25■□□□□ 0.03
LMX1B-202ENST00000373474 PAWRQ96IZ0 340 aaKnown RBP15.25■□□□□ 0.03
LMX1B-202ENST00000373474 TEX33O43247 280 aa15.24■□□□□ 0.03
LMX1B-202ENST00000373474 PSAPP07602 524 aa15.24■□□□□ 0.03
LMX1B-202ENST00000373474 ESRRAP11474 423 aaPredicted RBP15.24■□□□□ 0.03
LMX1B-202ENST00000373474 KPNA2P52292 529 aaKnown RBP15.24■□□□□ 0.03
LMX1B-202ENST00000373474 TRIM60Q495X7 471 aa15.24■□□□□ 0.03
LMX1B-202ENST00000373474 ATG16L1Q676U5 607 aa15.24■□□□□ 0.03
LMX1B-202ENST00000373474 SESTD1Q86VW0 696 aa15.24■□□□□ 0.03
LMX1B-202ENST00000373474 CDHR1Q96JP9 859 aa15.24■□□□□ 0.03
LMX1B-202ENST00000373474 KRT82Q9NSB4 513 aa15.24■□□□□ 0.03
LMX1B-202ENST00000373474 IQSEC2Q5JU85 1478 aa15.24■□□□□ 0.03
LMX1B-202ENST00000373474 GOLGA8SH3BPF8 625 aa15.24■□□□□ 0.03
LMX1B-202ENST00000373474 SRGAP2BP0DMP2 458 aa15.24■□□□□ 0.03
LMX1B-202ENST00000373474 IGBP1P78318 339 aa15.24■□□□□ 0.03
LMX1B-202ENST00000373474 CLEC4GQ6UXB4 293 aa15.24■□□□□ 0.03
LMX1B-202ENST00000373474 SGMS1Q86VZ5 419 aa15.24■□□□□ 0.03
LMX1B-202ENST00000373474 TMEM47Q9BQJ4 181 aa15.24■□□□□ 0.03
LMX1B-202ENST00000373474 UPF3AQ9H1J1 476 aaKnown RBP15.24■□□□□ 0.03
LMX1B-202ENST00000373474 CPDO75976 1380 aa15.24■□□□□ 0.03
LMX1B-202ENST00000373474 MIF4GDA9UHW6 222 aaKnown RBP15.24■□□□□ 0.03
LMX1B-202ENST00000373474 RANBP1P43487 201 aa15.24■□□□□ 0.03
LMX1B-202ENST00000373474 BHMT2Q9H2M3 363 aa15.24■□□□□ 0.03
LMX1B-202ENST00000373474 A0A1W2PQC6 194 aa15.24■□□□□ 0.03
LMX1B-202ENST00000373474 KRT10P13645 584 aa15.24■□□□□ 0.03
LMX1B-202ENST00000373474 IRX1P78414 480 aaPredicted RBP15.24■□□□□ 0.03
LMX1B-202ENST00000373474 BASP1P80723 227 aaKnown RBP15.24■□□□□ 0.03
LMX1B-202ENST00000373474 MRPS25P82663 173 aaKnown RBP15.24■□□□□ 0.03
LMX1B-202ENST00000373474 PALMDQ9NP74 551 aa15.24■□□□□ 0.03
LMX1B-202ENST00000373474 STOML1Q9UBI4 398 aa15.24■□□□□ 0.03
LMX1B-202ENST00000373474 MID2Q9UJV3 735 aa15.24■□□□□ 0.03
LMX1B-202ENST00000373474 PPME1Q9Y570 386 aa15.24■□□□□ 0.03
LMX1B-202ENST00000373474 ZBTB5O15062 677 aa15.24■□□□□ 0.03
LMX1B-202ENST00000373474 S100BP04271 92 aaPredicted RBP15.24■□□□□ 0.03
LMX1B-202ENST00000373474 HOXA13P31271 388 aaPredicted RBP15.24■□□□□ 0.03
LMX1B-202ENST00000373474 DBNDD1Q9H9R9 158 aa15.24■□□□□ 0.03
LMX1B-202ENST00000373474 PCDHA6Q9UN73 950 aa15.24■□□□□ 0.03
LMX1B-202ENST00000373474 PCDHA8Q9Y5H6 950 aa15.24■□□□□ 0.03
LMX1B-202ENST00000373474 SYNJ2BP-COX16A0A087WUM0 186 aa15.23■□□□□ 0.03
LMX1B-202ENST00000373474 POTEMA6NI47 508 aa15.23■□□□□ 0.03
LMX1B-202ENST00000373474 GSTA4O15217 222 aa15.23■□□□□ 0.03
LMX1B-202ENST00000373474 RAP1GDS1P52306 607 aa15.23■□□□□ 0.03
LMX1B-202ENST00000373474 PDCLQ13371 301 aa15.23■□□□□ 0.03
LMX1B-202ENST00000373474 RAPH1Q70E73 1250 aa15.23■□□□□ 0.03
LMX1B-202ENST00000373474 CENPUQ71F23 418 aa15.23■□□□□ 0.03
LMX1B-202ENST00000373474 GSPT2Q8IYD1 628 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms