RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 ANKRD45Q5TZF3 282 aa18.03■□□□□ 0.48
TRAPPC3-203ENST00000373163 FAM43BQ6ZT52 329 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC3-203ENST00000373163 TMC7Q7Z402 723 aa18.03■□□□□ 0.48
TRAPPC3-203ENST00000373163 KIAA2013Q8IYS2 634 aa18.03■□□□□ 0.48
TRAPPC3-203ENST00000373163 PLCD3Q8N3E9 789 aa18.03■□□□□ 0.48
TRAPPC3-203ENST00000373163 NME8Q8N427 588 aa18.03■□□□□ 0.48
TRAPPC3-203ENST00000373163 DTWD2Q8NBA8 298 aa18.03■□□□□ 0.48
TRAPPC3-203ENST00000373163 TRAPPC12Q8WVT3 735 aa18.03■□□□□ 0.48
TRAPPC3-203ENST00000373163 TNPO1Q92973 898 aaKnown RBP18.03■□□□□ 0.48
TRAPPC3-203ENST00000373163 CUL5Q93034 780 aa18.03■□□□□ 0.48
TRAPPC3-203ENST00000373163 SEMA4AQ9H3S1 761 aa18.03■□□□□ 0.48
TRAPPC3-203ENST00000373163 CNNM2Q9H8M5 875 aa18.03■□□□□ 0.48
TRAPPC3-203ENST00000373163 ATP6V0A4Q9HBG4 840 aa18.03■□□□□ 0.48
TRAPPC3-203ENST00000373163 PKD2L1Q9P0L9 805 aa18.03■□□□□ 0.48
TRAPPC3-203ENST00000373163 GINS2Q9Y248 185 aa18.03■□□□□ 0.48
TRAPPC3-203ENST00000373163 SMIM35A0A1B0GVV1 85 aa18.02■□□□□ 0.48
TRAPPC3-203ENST00000373163 C9IYK1 514 aa18.02■□□□□ 0.48
TRAPPC3-203ENST00000373163 RPS6KA5O75582 802 aa18.02■□□□□ 0.48
TRAPPC3-203ENST00000373163 NPR3P17342 541 aa18.02■□□□□ 0.48
TRAPPC3-203ENST00000373163 KRT17Q04695 432 aa18.02■□□□□ 0.48
TRAPPC3-203ENST00000373163 PUM1Q14671 1186 aaKnown RBP eCLIP18.02■□□□□ 0.48
TRAPPC3-203ENST00000373163 USP17L6PQ6QN14 398 aa18.02■□□□□ 0.48
TRAPPC3-203ENST00000373163 RILPL2Q969X0 211 aa18.02■□□□□ 0.48
TRAPPC3-203ENST00000373163 PCYT2Q99447 389 aa18.02■□□□□ 0.48
TRAPPC3-203ENST00000373163 RTP3Q9BQQ7 232 aa18.02■□□□□ 0.48
TRAPPC3-203ENST00000373163 AZI2Q9H6S1 392 aa18.02■□□□□ 0.48
TRAPPC3-203ENST00000373163 TMEM161AQ9NX61 479 aa18.02■□□□□ 0.48
TRAPPC3-203ENST00000373163 DBR1Q9UK59 544 aaKnown RBP18.02■□□□□ 0.48
TRAPPC3-203ENST00000373163 RIF1Q5UIP0 2472 aaKnown RBP18.01■□□□□ 0.47
TRAPPC3-203ENST00000373163 VPS13AQ96RL7 3174 aa18.01■□□□□ 0.47
TRAPPC3-203ENST00000373163 DOCK5Q9H7D0 1870 aa18.01■□□□□ 0.47
TRAPPC3-203ENST00000373163 ARP10275 920 aa18.01■□□□□ 0.47
TRAPPC3-203ENST00000373163 ITGB5P18084 799 aa18.01■□□□□ 0.47
TRAPPC3-203ENST00000373163 PPM1AP35813 382 aa18.01■□□□□ 0.47
TRAPPC3-203ENST00000373163 SMC1AQ14683 1233 aaKnown RBP18.01■□□□□ 0.47
TRAPPC3-203ENST00000373163 PLCB4Q15147 1175 aa18.01■□□□□ 0.47
TRAPPC3-203ENST00000373163 RARS2Q5T160 578 aaKnown RBP18.01■□□□□ 0.47
TRAPPC3-203ENST00000373163 KCNT2Q6UVM3 1135 aa18.01■□□□□ 0.47
TRAPPC3-203ENST00000373163 MRPL43Q8N983 215 aaKnown RBP18.01■□□□□ 0.47
TRAPPC3-203ENST00000373163 PIBF1Q8WXW3 757 aa18.01■□□□□ 0.47
TRAPPC3-203ENST00000373163 ZNF558Q96NG5 402 aa18.01■□□□□ 0.47
TRAPPC3-203ENST00000373163 USTQ9Y2C2 406 aa18.01■□□□□ 0.47
TRAPPC3-203ENST00000373163 NOC2LQ9Y3T9 749 aaKnown RBP18.01■□□□□ 0.47
TRAPPC3-203ENST00000373163 C2orf71A6NGG8 1288 aa18■□□□□ 0.47
TRAPPC3-203ENST00000373163 PIK3CDO00329 1044 aa18■□□□□ 0.47
TRAPPC3-203ENST00000373163 CLASP2O75122 1294 aaKnown RBP18■□□□□ 0.47
TRAPPC3-203ENST00000373163 EOMESO95936 686 aa18■□□□□ 0.47
TRAPPC3-203ENST00000373163 SDSP20132 328 aa18■□□□□ 0.47
TRAPPC3-203ENST00000373163 PBX3P40426 434 aa18■□□□□ 0.47
TRAPPC3-203ENST00000373163 MTMR1Q13613 665 aa18■□□□□ 0.47
TRAPPC3-203ENST00000373163 ATAT1Q5SQI0 421 aa18■□□□□ 0.47
TRAPPC3-203ENST00000373163 ODR4Q5SWX8 454 aa18■□□□□ 0.47
TRAPPC3-203ENST00000373163 KIAA1841Q6NSI8 718 aa18■□□□□ 0.47
TRAPPC3-203ENST00000373163 MTHFD1LQ6UB35 978 aa18■□□□□ 0.47
TRAPPC3-203ENST00000373163 C12orf76Q8N812 135 aaPredicted RBP18■□□□□ 0.47
TRAPPC3-203ENST00000373163 TMEM40Q8WWA1 233 aa18■□□□□ 0.47
TRAPPC3-203ENST00000373163 CNTNAP3BQ96NU0 1288 aa18■□□□□ 0.47
TRAPPC3-203ENST00000373163 CNTNAP3Q9BZ76 1288 aa18■□□□□ 0.47
TRAPPC3-203ENST00000373163 TMEM117Q9H0C3 514 aa18■□□□□ 0.47
TRAPPC3-203ENST00000373163 ELAC1Q9H777 363 aaKnown RBP18■□□□□ 0.47
TRAPPC3-203ENST00000373163 CYP26B1Q9NR63 512 aa18■□□□□ 0.47
TRAPPC3-203ENST00000373163 ST3GAL5Q9UNP4 418 aa18■□□□□ 0.47
TRAPPC3-203ENST00000373163 MEIS2O14770 477 aa17.99■□□□□ 0.47
TRAPPC3-203ENST00000373163 GPR182O15218 404 aa17.99■□□□□ 0.47
TRAPPC3-203ENST00000373163 LRRC55Q6ZSA7 311 aa17.99■□□□□ 0.47
TRAPPC3-203ENST00000373163 SIX5Q8N196 739 aa17.99■□□□□ 0.47
TRAPPC3-203ENST00000373163 LRRC43Q8N309 656 aa17.99■□□□□ 0.47
TRAPPC3-203ENST00000373163 HINFPQ9BQA5 517 aa17.99■□□□□ 0.47
TRAPPC3-203ENST00000373163 CDHR5Q9HBB8 845 aa17.99■□□□□ 0.47
TRAPPC3-203ENST00000373163 JPH1Q9HDC5 661 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC3-203ENST00000373163 SPG21Q9NZD8 308 aa17.99■□□□□ 0.47
TRAPPC3-203ENST00000373163 FBXL21Q9UKT6 434 aa17.99■□□□□ 0.47
TRAPPC3-203ENST00000373163 LAMA4Q16363 1823 aa17.98■□□□□ 0.47
TRAPPC3-203ENST00000373163 CA8P35219 290 aa17.98■□□□□ 0.47
TRAPPC3-203ENST00000373163 FAM189BP81408 668 aa17.98■□□□□ 0.47
TRAPPC3-203ENST00000373163 TDGQ13569 410 aa17.98■□□□□ 0.47
TRAPPC3-203ENST00000373163 CWC27Q6UX04 472 aaKnown RBP17.98■□□□□ 0.47
TRAPPC3-203ENST00000373163 CYB5R4Q7L1T6 521 aa17.98■□□□□ 0.47
TRAPPC3-203ENST00000373163 CYP2W1Q8TAV3 490 aa17.98■□□□□ 0.47
TRAPPC3-203ENST00000373163 CASD1Q96PB1 797 aa17.98■□□□□ 0.47
TRAPPC3-203ENST00000373163 DSCC1Q9BVC3 393 aa17.98■□□□□ 0.47
TRAPPC3-203ENST00000373163 DZANK1Q9NVP4 752 aa17.98■□□□□ 0.47
TRAPPC3-203ENST00000373163 DUSP12Q9UNI6 340 aa17.98■□□□□ 0.47
TRAPPC3-203ENST00000373163 UBIAD1Q9Y5Z9 338 aa17.98■□□□□ 0.47
TRAPPC3-203ENST00000373163 R4GN57 208 aa17.98■□□□□ 0.47
TRAPPC3-203ENST00000373163 GVINP1Q7Z2Y8 2422 aa17.97■□□□□ 0.47
TRAPPC3-203ENST00000373163 HOXA2O43364 376 aa17.97■□□□□ 0.47
TRAPPC3-203ENST00000373163 KANK3Q6NY19 840 aa17.97■□□□□ 0.47
TRAPPC3-203ENST00000373163 PLPPR4Q7Z2D5 763 aa17.97■□□□□ 0.47
TRAPPC3-203ENST00000373163 ABI1Q8IZP0 508 aa17.97■□□□□ 0.47
TRAPPC3-203ENST00000373163 ACSF2Q96CM8 615 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC3-203ENST00000373163 DLL3Q9NYJ7 618 aa17.97■□□□□ 0.47
TRAPPC3-203ENST00000373163 SLC9A2Q9UBY0 812 aa17.97■□□□□ 0.47
TRAPPC3-203ENST00000373163 KLRC1P26715 233 aa17.96■□□□□ 0.47
TRAPPC3-203ENST00000373163 STAT5BP51692 787 aa17.96■□□□□ 0.47
TRAPPC3-203ENST00000373163 BMS1Q14692 1282 aaKnown RBP17.96■□□□□ 0.47
TRAPPC3-203ENST00000373163 KIAA0319LQ8IZA0 1049 aa17.96■□□□□ 0.47
TRAPPC3-203ENST00000373163 JADE2Q9NQC1 790 aa17.96■□□□□ 0.47
TRAPPC3-203ENST00000373163 RNF19AQ9NV58 838 aa17.96■□□□□ 0.47
TRAPPC3-203ENST00000373163 FNDC1Q4ZHG4 1894 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms