RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 SPOUT1Q5T280 376 aaKnown RBP17.18■□□□□ 0.34
RPF1-202ENST00000370656 BLOC1S2Q6QNY1 142 aa17.18■□□□□ 0.34
RPF1-202ENST00000370656 RTN4RL1Q86UN2 441 aaPredicted RBP17.18■□□□□ 0.34
RPF1-202ENST00000370656 NME8Q8N427 588 aa17.18■□□□□ 0.34
RPF1-202ENST00000370656 FBXL6Q8N531 539 aa17.18■□□□□ 0.34
RPF1-202ENST00000370656 SPDYE1Q8NFV5 336 aaPredicted RBP17.18■□□□□ 0.34
RPF1-202ENST00000370656 AGXT2Q9BYV1 514 aa17.18■□□□□ 0.34
RPF1-202ENST00000370656 CELF4Q9BZC1 486 aaKnown RBP17.18■□□□□ 0.34
RPF1-202ENST00000370656 IRF2BPLQ9H1B7 796 aa17.18■□□□□ 0.34
RPF1-202ENST00000370656 JPH1Q9HDC5 661 aaPredicted RBP17.18■□□□□ 0.34
RPF1-202ENST00000370656 BARX2Q9UMQ3 279 aaPredicted RBP17.18■□□□□ 0.34
RPF1-202ENST00000370656 USP15Q9Y4E8 981 aaPredicted RBP17.18■□□□□ 0.34
RPF1-202ENST00000370656 PCDHA2Q9Y5H9 948 aa17.18■□□□□ 0.34
RPF1-202ENST00000370656 UBIAD1Q9Y5Z9 338 aa17.18■□□□□ 0.34
RPF1-202ENST00000370656 SRGAP2BP0DMP2 458 aa17.17■□□□□ 0.34
RPF1-202ENST00000370656 SIGLEC14Q08ET2 396 aa17.17■□□□□ 0.34
RPF1-202ENST00000370656 TMEM62Q0P6H9 643 aa17.17■□□□□ 0.34
RPF1-202ENST00000370656 FNDC1Q4ZHG4 1894 aaPredicted RBP17.17■□□□□ 0.34
RPF1-202ENST00000370656 ZNF654Q8IZM8 581 aa17.17■□□□□ 0.34
RPF1-202ENST00000370656 IGDCC4Q8TDY8 1250 aa17.17■□□□□ 0.34
RPF1-202ENST00000370656 CDCA3Q99618 268 aaPredicted RBP17.17■□□□□ 0.34
RPF1-202ENST00000370656 JADE2Q9NQC1 790 aa17.17■□□□□ 0.34
RPF1-202ENST00000370656 PDRG1Q9NUG6 133 aa17.17■□□□□ 0.34
RPF1-202ENST00000370656 SLC9A2Q9UBY0 812 aa17.17■□□□□ 0.34
RPF1-202ENST00000370656 PCDHB7Q9Y5E2 793 aa17.17■□□□□ 0.34
RPF1-202ENST00000370656 CFAP54Q96N23 3096 aa17.16■□□□□ 0.34
RPF1-202ENST00000370656 PPFIA3O75145 1194 aa17.16■□□□□ 0.34
RPF1-202ENST00000370656 ATF7P17544 494 aaPredicted RBP17.16■□□□□ 0.34
RPF1-202ENST00000370656 SARSP49591 514 aaKnown RBP17.16■□□□□ 0.34
RPF1-202ENST00000370656 KRT76Q01546 638 aa17.16■□□□□ 0.34
RPF1-202ENST00000370656 ANKRD1Q15327 319 aa17.16■□□□□ 0.34
RPF1-202ENST00000370656 ODR4Q5SWX8 454 aa17.16■□□□□ 0.34
RPF1-202ENST00000370656 IER5LQ5T953 404 aa17.16■□□□□ 0.34
RPF1-202ENST00000370656 PDE12Q6L8Q7 609 aaKnown RBP17.16■□□□□ 0.34
RPF1-202ENST00000370656 DHX32Q7L7V1 743 aaKnown RBP17.16■□□□□ 0.34
RPF1-202ENST00000370656 TMTC2Q8N394 836 aa17.16■□□□□ 0.34
RPF1-202ENST00000370656 INTS4Q96HW7 963 aaKnown RBP17.16■□□□□ 0.34
RPF1-202ENST00000370656 TMX3Q96JJ7 454 aa17.16■□□□□ 0.34
RPF1-202ENST00000370656 RPGRIP1Q96KN7 1286 aa17.16■□□□□ 0.34
RPF1-202ENST00000370656 SDF4Q9BRK5 362 aa17.16■□□□□ 0.34
RPF1-202ENST00000370656 TLR9Q9NR96 1032 aa17.16■□□□□ 0.34
RPF1-202ENST00000370656 LIMCH1Q9UPQ0 1083 aa17.16■□□□□ 0.34
RPF1-202ENST00000370656 KDM3AQ9Y4C1 1321 aa17.16■□□□□ 0.34
RPF1-202ENST00000370656 ZFHX2Q9C0A1 2572 aaPredicted RBP17.15■□□□□ 0.34
RPF1-202ENST00000370656 SMIM35A0A1B0GVV1 85 aa17.15■□□□□ 0.34
RPF1-202ENST00000370656 GLP2RO95838 553 aa17.15■□□□□ 0.34
RPF1-202ENST00000370656 IBSPP21815 317 aaPredicted RBP17.15■□□□□ 0.34
RPF1-202ENST00000370656 AK2P54819 239 aa17.15■□□□□ 0.34
RPF1-202ENST00000370656 NFX1Q12986 1120 aaKnown RBP17.15■□□□□ 0.34
RPF1-202ENST00000370656 COL9A3Q14050 684 aaPredicted RBP17.15■□□□□ 0.34
RPF1-202ENST00000370656 NFXL1Q6ZNB6 911 aa17.15■□□□□ 0.34
RPF1-202ENST00000370656 PLPPR4Q7Z2D5 763 aa17.15■□□□□ 0.34
RPF1-202ENST00000370656 ZBTB10Q96DT7 871 aa17.15■□□□□ 0.34
RPF1-202ENST00000370656 ZSCAN31Q96LW9 406 aaPredicted RBP17.15■□□□□ 0.34
RPF1-202ENST00000370656 MTA3Q9BTC8 594 aa17.15■□□□□ 0.34
RPF1-202ENST00000370656 MYL10Q9BUA6 226 aa17.15■□□□□ 0.34
RPF1-202ENST00000370656 DENND3A2RUS2 1198 aa17.14■□□□□ 0.33
RPF1-202ENST00000370656 CCDC69A6NI79 296 aa17.14■□□□□ 0.33
RPF1-202ENST00000370656 GFRA3O60609 400 aa17.14■□□□□ 0.33
RPF1-202ENST00000370656 CALM1P0DP23 149 aa17.14■□□□□ 0.33
RPF1-202ENST00000370656 CALM2P0DP24 149 aa17.14■□□□□ 0.33
RPF1-202ENST00000370656 CALM3P0DP25 149 aa17.14■□□□□ 0.33
RPF1-202ENST00000370656 SLC26A2P50443 739 aa17.14■□□□□ 0.33
RPF1-202ENST00000370656 STAT5BP51692 787 aa17.14■□□□□ 0.33
RPF1-202ENST00000370656 ANTXR2P58335 489 aa17.14■□□□□ 0.33
RPF1-202ENST00000370656 PLCB4Q15147 1175 aa17.14■□□□□ 0.33
RPF1-202ENST00000370656 MB21D2Q8IYB1 491 aaPredicted RBP17.14■□□□□ 0.33
RPF1-202ENST00000370656 PCYT2Q99447 389 aa17.14■□□□□ 0.33
RPF1-202ENST00000370656 LY9Q9HBG7 655 aa17.14■□□□□ 0.33
RPF1-202ENST00000370656 C1orf112Q9NSG2 853 aa17.14■□□□□ 0.33
RPF1-202ENST00000370656 FAM86C1Q9NVL1 165 aa17.14■□□□□ 0.33
RPF1-202ENST00000370656 PCDHA6Q9UN73 950 aa17.14■□□□□ 0.33
RPF1-202ENST00000370656 PCDHA8Q9Y5H6 950 aa17.14■□□□□ 0.33
RPF1-202ENST00000370656 EVPLQ92817 2033 aa17.14■□□□□ 0.33
RPF1-202ENST00000370656 CACNA1HO95180 2353 aa17.14■□□□□ 0.33
RPF1-202ENST00000370656 TBKBP1A7MCY6 615 aa17.13■□□□□ 0.33
RPF1-202ENST00000370656 PER2O15055 1255 aa17.13■□□□□ 0.33
RPF1-202ENST00000370656 CPA1P15085 419 aa17.13■□□□□ 0.33
RPF1-202ENST00000370656 GATMP50440 423 aa17.13■□□□□ 0.33
RPF1-202ENST00000370656 EVCP57679 992 aa17.13■□□□□ 0.33
RPF1-202ENST00000370656 ACTR2P61160 394 aa17.13■□□□□ 0.33
RPF1-202ENST00000370656 TCF15Q12870 199 aa17.13■□□□□ 0.33
RPF1-202ENST00000370656 UBE2SQ16763 222 aa17.13■□□□□ 0.33
RPF1-202ENST00000370656 TMEM266Q2M3C6 531 aa17.13■□□□□ 0.33
RPF1-202ENST00000370656 ZBTB33Q86T24 672 aa17.13■□□□□ 0.33
RPF1-202ENST00000370656 THNSL1Q8IYQ7 743 aa17.13■□□□□ 0.33
RPF1-202ENST00000370656 SRBD1Q8N5C6 995 aaKnown RBP17.13■□□□□ 0.33
RPF1-202ENST00000370656 ATP8B4Q8TF62 1192 aa17.13■□□□□ 0.33
RPF1-202ENST00000370656 TRAPPC12Q8WVT3 735 aa17.13■□□□□ 0.33
RPF1-202ENST00000370656 TMX1Q9H3N1 280 aa17.13■□□□□ 0.33
RPF1-202ENST00000370656 SH2B1Q9NRF2 756 aaPredicted RBP17.13■□□□□ 0.33
RPF1-202ENST00000370656 KCNH7Q9NS40 1196 aa17.13■□□□□ 0.33
RPF1-202ENST00000370656 CIZ1Q9ULV3 898 aaPredicted RBP17.13■□□□□ 0.33
RPF1-202ENST00000370656 GINS2Q9Y248 185 aa17.13■□□□□ 0.33
RPF1-202ENST00000370656 NFASCO94856 1347 aa17.13■□□□□ 0.33
RPF1-202ENST00000370656 RPS6KA5O75582 802 aa17.12■□□□□ 0.33
RPF1-202ENST00000370656 FGF18O76093 207 aa17.12■□□□□ 0.33
RPF1-202ENST00000370656 PLEKHA8P1O95397 391 aa17.12■□□□□ 0.33
RPF1-202ENST00000370656 TOB2Q14106 344 aaPredicted RBP17.12■□□□□ 0.33
RPF1-202ENST00000370656 DUSP6Q16828 381 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 872.9 ms